RNA–Protein interactions for RNA: ENST00000572975.1

STRA6-213, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 5

Gene STRA6, Length 795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-213ENST00000572975 LTBP3Q9NS15 1303 aa17.34■□□□□ 0.37
STRA6-213ENST00000572975 MBIPQ9NS73 344 aa17.34■□□□□ 0.37
STRA6-213ENST00000572975 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
STRA6-213ENST00000572975 TNRC6CQ9HCJ0 1690 aaKnown RBP17.33■□□□□ 0.37
STRA6-213ENST00000572975 IBTKQ9P2D0 1353 aaPredicted RBP17.33■□□□□ 0.36
STRA6-213ENST00000572975 HOXB7P09629 217 aa17.33■□□□□ 0.36
STRA6-213ENST00000572975 GNAI1P63096 354 aa17.33■□□□□ 0.36
STRA6-213ENST00000572975 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.36
STRA6-213ENST00000572975 C7orf43Q8WVR3 580 aa17.33■□□□□ 0.36
STRA6-213ENST00000572975 NTSR2O95665 410 aa17.32■□□□□ 0.36
STRA6-213ENST00000572975 VEGFAP15692 232 aaPredicted RBP17.32■□□□□ 0.36
STRA6-213ENST00000572975 CRY2Q49AN0 593 aa17.32■□□□□ 0.36
STRA6-213ENST00000572975 DUSP27Q5VZP5 1158 aa17.32■□□□□ 0.36
STRA6-213ENST00000572975 RTKN2Q8IZC4 609 aa17.32■□□□□ 0.36
STRA6-213ENST00000572975 RBM17Q96I25 401 aaKnown RBP17.32■□□□□ 0.36
STRA6-213ENST00000572975 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
STRA6-213ENST00000572975 IFT57Q9NWB7 429 aa17.32■□□□□ 0.36
STRA6-213ENST00000572975 DBF4Q9UBU7 674 aaPredicted RBP17.32■□□□□ 0.36
STRA6-213ENST00000572975 OLFM4Q6UX06 510 aa17.31■□□□□ 0.36
STRA6-213ENST00000572975 FAM9BQ8IZU0 186 aa17.31■□□□□ 0.36
STRA6-213ENST00000572975 ELL2O00472 640 aaPredicted RBP17.3■□□□□ 0.36
STRA6-213ENST00000572975 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
STRA6-213ENST00000572975 FKBP4Q02790 459 aaKnown RBP eCLIP17.3■□□□□ 0.36
STRA6-213ENST00000572975 TCIRG1Q13488 830 aa17.3■□□□□ 0.36
STRA6-213ENST00000572975 HYPKQ9NX55 129 aa17.3■□□□□ 0.36
STRA6-213ENST00000572975 TCERG1O14776 1098 aaKnown RBP17.29■□□□□ 0.36
STRA6-213ENST00000572975 HOXA10P31260 410 aaPredicted RBP17.29■□□□□ 0.36
STRA6-213ENST00000572975 APLP1P51693 650 aa17.29■□□□□ 0.36
STRA6-213ENST00000572975 ANKRD13DQ6ZTN6 518 aa17.29■□□□□ 0.36
STRA6-213ENST00000572975 NLRP10Q86W26 655 aa17.29■□□□□ 0.36
STRA6-213ENST00000572975 TMX4Q9H1E5 349 aaPredicted RBP17.29■□□□□ 0.36
STRA6-213ENST00000572975 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
STRA6-213ENST00000572975 TRMT112Q9UI30 125 aaKnown RBP17.29■□□□□ 0.36
STRA6-213ENST00000572975 ANKRD36CQ5JPF3 1778 aa17.29■□□□□ 0.36
STRA6-213ENST00000572975 RIC1Q4ADV7 1423 aa17.29■□□□□ 0.36
STRA6-213ENST00000572975 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
STRA6-213ENST00000572975 FSTL1Q12841 308 aa17.28■□□□□ 0.36
STRA6-213ENST00000572975 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
STRA6-213ENST00000572975 CC2D2BQ6DHV5 1058 aa17.28■□□□□ 0.36
STRA6-213ENST00000572975 SYNE4Q8N205 404 aa17.28■□□□□ 0.36
STRA6-213ENST00000572975 PLBD2Q8NHP8 589 aa17.28■□□□□ 0.36
STRA6-213ENST00000572975 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
STRA6-213ENST00000572975 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
STRA6-213ENST00000572975 SMC1BQ8NDV3 1235 aa17.27■□□□□ 0.36
STRA6-213ENST00000572975 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.36
STRA6-213ENST00000572975 SH3TC1Q8TE82 1336 aa17.26■□□□□ 0.35
STRA6-213ENST00000572975 PPEF1O14829 653 aaPredicted RBP17.26■□□□□ 0.35
STRA6-213ENST00000572975 DDNO94850 711 aaPredicted RBP17.26■□□□□ 0.35
STRA6-213ENST00000572975 HCLS1P14317 486 aaPredicted RBP17.26■□□□□ 0.35
STRA6-213ENST00000572975 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
STRA6-213ENST00000572975 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
STRA6-213ENST00000572975 IARSP41252 1262 aaKnown RBP17.25■□□□□ 0.35
STRA6-213ENST00000572975 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
STRA6-213ENST00000572975 GRIPAP1Q4V328 841 aa17.25■□□□□ 0.35
STRA6-213ENST00000572975 RIC3Q7Z5B4 369 aa17.25■□□□□ 0.35
STRA6-213ENST00000572975 ATP5J2-PTCD1G3V325 749 aa17.24■□□□□ 0.35
STRA6-213ENST00000572975 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
STRA6-213ENST00000572975 JDP2Q8WYK2 163 aa17.24■□□□□ 0.35
STRA6-213ENST00000572975 PSMD1Q99460 953 aa17.24■□□□□ 0.35
STRA6-213ENST00000572975 WDR90Q96KV7 1748 aa17.24■□□□□ 0.35
STRA6-213ENST00000572975 POTECB2RU33 542 aa17.23■□□□□ 0.35
STRA6-213ENST00000572975 CCDC27Q2M243 656 aa17.23■□□□□ 0.35
STRA6-213ENST00000572975 CCDC30Q5VVM6 783 aa17.23■□□□□ 0.35
STRA6-213ENST00000572975 DDX46Q7L014 1031 aaKnown RBP17.23■□□□□ 0.35
STRA6-213ENST00000572975 BBOX1O75936 387 aa17.22■□□□□ 0.35
STRA6-213ENST00000572975 WWC1Q8IX03 1113 aa17.22■□□□□ 0.35
STRA6-213ENST00000572975 TSR2Q969E8 191 aaKnown RBP17.22■□□□□ 0.35
STRA6-213ENST00000572975 FAM89AQ96GI7 184 aa17.22■□□□□ 0.35
STRA6-213ENST00000572975 ISCA1Q9BUE6 129 aa17.22■□□□□ 0.35
STRA6-213ENST00000572975 PHAXQ9H814 394 aaKnown RBP17.22■□□□□ 0.35
STRA6-213ENST00000572975 ABCC4O15439 1325 aa17.21■□□□□ 0.35
STRA6-213ENST00000572975 ZBED9Q6R2W3 1325 aa17.21■□□□□ 0.35
STRA6-213ENST00000572975 LAMB2P55268 1798 aa17.21■□□□□ 0.35
STRA6-213ENST00000572975 IQCA1LA6NCM1 817 aa17.21■□□□□ 0.35
STRA6-213ENST00000572975 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
STRA6-213ENST00000572975 LARGE2Q8N3Y3 721 aa17.21■□□□□ 0.35
STRA6-213ENST00000572975 SALL2Q9Y467 1007 aaPredicted RBP17.21■□□□□ 0.35
STRA6-213ENST00000572975 DDX58O95786 925 aaKnown RBP17.2■□□□□ 0.34
STRA6-213ENST00000572975 ATP6V0A2Q9Y487 856 aa17.2■□□□□ 0.34
STRA6-213ENST00000572975 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
STRA6-213ENST00000572975 FZD9O00144 591 aa17.19■□□□□ 0.34
STRA6-213ENST00000572975 EIF6P56537 245 aaKnown RBP17.19■□□□□ 0.34
STRA6-213ENST00000572975 MYD88Q99836 296 aa17.19■□□□□ 0.34
STRA6-213ENST00000572975 STK31Q9BXU1 1019 aa17.19■□□□□ 0.34
STRA6-213ENST00000572975 HTRA3P83110 453 aa17.18■□□□□ 0.34
STRA6-213ENST00000572975 TRIM28Q13263 835 aaKnown RBP17.18■□□□□ 0.34
STRA6-213ENST00000572975 GRAPQ13588 217 aa17.18■□□□□ 0.34
STRA6-213ENST00000572975 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
STRA6-213ENST00000572975 SLC51AQ86UW1 340 aa17.18■□□□□ 0.34
STRA6-213ENST00000572975 SP8Q8IXZ3 490 aa17.18■□□□□ 0.34
STRA6-213ENST00000572975 TSPYL6Q8N831 410 aa17.18■□□□□ 0.34
STRA6-213ENST00000572975 SUPT20HQ8NEM7 779 aa17.18■□□□□ 0.34
STRA6-213ENST00000572975 GRAPLQ8TC17 118 aaPredicted RBP17.18■□□□□ 0.34
STRA6-213ENST00000572975 L3MBTL3Q96JM7 780 aaPredicted RBP17.18■□□□□ 0.34
STRA6-213ENST00000572975 GJA3Q9Y6H8 435 aa17.18■□□□□ 0.34
STRA6-213ENST00000572975 SCN4AP35499 1836 aa17.18■□□□□ 0.34
STRA6-213ENST00000572975 PPIP5K2O43314 1243 aa17.17■□□□□ 0.34
STRA6-213ENST00000572975 TAF1P21675 1872 aa17.17■□□□□ 0.34
STRA6-213ENST00000572975 CHADLQ6NUI6 762 aa17.17■□□□□ 0.34
STRA6-213ENST00000572975 NIM1KQ8IY84 436 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms