RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 AXDND1Q5T1B0 1012 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 ZKSCAN2Q63HK3 967 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 C16orf86Q6ZW13 317 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 ANKS3Q6ZW76 656 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 EYA1Q99502 592 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 HINFPQ9BQA5 517 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 ZNF69Q9UC07 566 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 KCNG1Q9UIX4 513 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 FRMD4BQ9Y2L6 1034 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 RPGRIP1LQ68CZ1 1315 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 ALG1L2C9J202 215 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 TCERG1O14776 1098 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 ALDH1L1O75891 902 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 LDHCP07864 332 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 CTSHP09668 335 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 WEE1P30291 646 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 GCGRP47871 477 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 FAM193AP78312 1265 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 GUCA2AQ02747 115 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 CCDC102BQ68D86 513 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 ALKBH2Q6NS38 261 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 TEX19Q8NA77 164 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 TPCN2Q8NHX9 752 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 STAC3Q96MF2 364 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 FAM129BQ96TA1 746 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 CDC5LQ99459 802 aaKnown RBP6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 RSPH9Q9H1X1 276 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 CCDC87Q9NVE4 849 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 LHX6Q9UPM6 363 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 ATP8A1Q9Y2Q0 1164 aa6.32□□□□□ -1.4
TOPBP1-210ENST00000572787 PNMA6FA0A0J9YX94 578 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 FAM221BA6H8Z2 402 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 KLF4O43474 513 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 IGHA2P01877 340 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 ATF3P18847 181 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 MPSTP25325 297 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 PMLP29590 882 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 CASP2P42575 452 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 FKBP5Q13451 457 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 TTF1Q15361 905 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 C10orf62Q5T681 223 aaPredicted RBP6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 TRAF7Q6Q0C0 670 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 POTEEQ6S8J3 1075 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 CAPN12Q6ZSI9 719 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 CHPFQ8IZ52 775 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 IFNL3Q8IZI9 196 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 FBF1Q8TES7 1133 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 CDCA7LQ96GN5 454 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 NEUROD6Q96NK8 337 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 SETDB2Q96T68 719 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 CHST12Q9NRB3 414 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 ENAMQ9NRM1 1142 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 TMEM260Q9NX78 707 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 KIAA1024Q9UPX6 916 aa6.31□□□□□ -1.4
TOPBP1-210ENST00000572787 A6NJY4 79 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 SFI1A8K8P3 1242 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 ARHGAP33O14559 1287 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 PER1O15534 1290 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 MZF1P28698 734 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 CDKN1CP49918 316 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 RBM10P98175 930 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 INO80DQ53TQ3 878 aaPredicted RBP6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 LILRB2Q8N423 598 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 MYRIPQ8NFW9 859 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 FBXO41Q8TF61 875 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 CCDC113Q9H0I3 377 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 TMEM134Q9H6X4 195 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 KANSL2Q9H9L4 492 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 KLF15Q9UIH9 416 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 FKBPLQ9UIM3 349 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 INTUQ9ULD6 942 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 STRIP2Q9ULQ0 834 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 R3HCC1Q9Y3T6 440 aaKnown RBP6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 NUB1Q9Y5A7 615 aa6.3□□□□□ -1.4
TOPBP1-210ENST00000572787 BICDL2A1A5D9 508 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 GPR182O15218 404 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 FAM163BP0C2L3 166 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 CNGA1P29973 690 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 GTF2IP78347 998 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 MORC3Q14149 939 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 NAA30Q147X3 362 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 GRAMD1BQ3KR37 738 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 CCDC70Q6NSX1 233 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 CASC1Q6TDU7 716 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 JAMLQ86YT9 394 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 ENOX1Q8TC92 643 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 KCTD12Q96CX2 325 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 JPH4Q96JJ6 628 aa6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 SRRTQ9BXP5 876 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 CDV3Q9UKY7 258 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-210ENST00000572787 MYL3P08590 195 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 EIF4BP23588 611 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 PDE6BP35913 854 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 SLC4A3P48751 1232 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 IFRD2Q12894 506 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 ACBD5Q5T8D3 534 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 RNF20Q5VTR2 975 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 GET4Q7L5D6 327 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 HDGFL2Q7Z4V5 671 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms