RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SNED1Q8TER0 1413 aa15.17■□□□□ 0.02
CHMP6-202ENST00000571457 TRPM7Q96QT4 1865 aa15.17■□□□□ 0.02
CHMP6-202ENST00000571457 COL3A1P02461 1466 aaPredicted RBP15.17■□□□□ 0.02
CHMP6-202ENST00000571457 PRAMEF22A3QJZ6 481 aa15.17■□□□□ 0.02
CHMP6-202ENST00000571457 PER1O15534 1290 aaPredicted RBP15.17■□□□□ 0.02
CHMP6-202ENST00000571457 CST9Q5W186 159 aa15.17■□□□□ 0.02
CHMP6-202ENST00000571457 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
CHMP6-202ENST00000571457 NBPF26B4DH59 902 aa15.16■□□□□ 0.02
CHMP6-202ENST00000571457 HOXA10P31260 410 aaPredicted RBP15.16■□□□□ 0.02
CHMP6-202ENST00000571457 NBPF10Q6P3W6 841 aaKnown RBP15.16■□□□□ 0.02
CHMP6-202ENST00000571457 NIM1KQ8IY84 436 aa15.16■□□□□ 0.02
CHMP6-202ENST00000571457 NBPF15Q8N660 670 aa15.16■□□□□ 0.02
CHMP6-202ENST00000571457 PHACTR3Q96KR7 559 aa15.16■□□□□ 0.02
CHMP6-202ENST00000571457 TMX4Q9H1E5 349 aaPredicted RBP15.16■□□□□ 0.02
CHMP6-202ENST00000571457 TRAF5O00463 557 aa15.15■□□□□ 0.02
CHMP6-202ENST00000571457 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
CHMP6-202ENST00000571457 FMR1Q06787 632 aaKnown RBP eCLIP15.15■□□□□ 0.02
CHMP6-202ENST00000571457 HLFQ16534 295 aa15.15■□□□□ 0.02
CHMP6-202ENST00000571457 HHIPL1Q96JK4 782 aa15.15■□□□□ 0.02
CHMP6-202ENST00000571457 ADARB2Q9NS39 739 aaKnown RBP15.15■□□□□ 0.02
CHMP6-202ENST00000571457 KIF7Q2M1P5 1343 aa15.15■□□□□ 0.02
CHMP6-202ENST00000571457 ERVV-1B6SEH8 477 aa15.14■□□□□ 0.01
CHMP6-202ENST00000571457 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
CHMP6-202ENST00000571457 SAPCD2Q86UD0 394 aa15.14■□□□□ 0.01
CHMP6-202ENST00000571457 RBM17Q96I25 401 aaKnown RBP15.14■□□□□ 0.01
CHMP6-202ENST00000571457 CFAP53Q96M91 514 aa15.14■□□□□ 0.01
CHMP6-202ENST00000571457 MCOLN1Q9GZU1 580 aa15.14■□□□□ 0.01
CHMP6-202ENST00000571457 VPS33BQ9H267 617 aa15.14■□□□□ 0.01
CHMP6-202ENST00000571457 TSKSQ9UJT2 592 aa15.14■□□□□ 0.01
CHMP6-202ENST00000571457 LTBP1Q14766 1721 aa15.14■□□□□ 0.01
CHMP6-202ENST00000571457 NPC1L1Q9UHC9 1359 aa15.13■□□□□ 0.01
CHMP6-202ENST00000571457 AOC2O75106 756 aa15.13■□□□□ 0.01
CHMP6-202ENST00000571457 CELF2O95319 508 aaKnown RBP15.13■□□□□ 0.01
CHMP6-202ENST00000571457 RIC1Q4ADV7 1423 aa15.13■□□□□ 0.01
CHMP6-202ENST00000571457 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
CHMP6-202ENST00000571457 CRAMP1Q96RY5 1269 aa15.13■□□□□ 0.01
CHMP6-202ENST00000571457 PCGF6Q9BYE7 350 aa15.13■□□□□ 0.01
CHMP6-202ENST00000571457 GPRC5DQ9NZD1 345 aa15.13■□□□□ 0.01
CHMP6-202ENST00000571457 COL4A5P29400 1685 aa15.12■□□□□ 0.01
CHMP6-202ENST00000571457 ABCC12Q96J65 1359 aa15.12■□□□□ 0.01
CHMP6-202ENST00000571457 PPIP5K2O43314 1243 aa15.12■□□□□ 0.01
CHMP6-202ENST00000571457 MCM10Q7L590 875 aa15.12■□□□□ 0.01
CHMP6-202ENST00000571457 RSPH6AQ9H0K4 717 aa15.12■□□□□ 0.01
CHMP6-202ENST00000571457 NUDCQ9Y266 331 aa15.12■□□□□ 0.01
CHMP6-202ENST00000571457 IBTKQ9P2D0 1353 aaPredicted RBP15.11■□□□□ 0.01
CHMP6-202ENST00000571457 CASP8AP2Q9UKL3 1982 aa15.11■□□□□ 0.01
CHMP6-202ENST00000571457 PPEF1O14829 653 aaPredicted RBP15.11■□□□□ 0.01
CHMP6-202ENST00000571457 HTATSF1O43719 755 aaKnown RBP15.11■□□□□ 0.01
CHMP6-202ENST00000571457 DGKZQ13574 1117 aa15.11■□□□□ 0.01
CHMP6-202ENST00000571457 TAF7Q15545 349 aaPredicted RBP15.11■□□□□ 0.01
CHMP6-202ENST00000571457 KIF6Q6ZMV9 814 aa15.11■□□□□ 0.01
CHMP6-202ENST00000571457 ZNRF3Q9ULT6 936 aa15.11■□□□□ 0.01
CHMP6-202ENST00000571457 CDHR2Q9BYE9 1310 aa15.11■□□□□ 0.01
CHMP6-202ENST00000571457 TNRC18O15417 2968 aaPredicted RBP15.11■□□□□ 0.01
CHMP6-202ENST00000571457 SUPT20HQ8NEM7 779 aa15.1■□□□□ 0.01
CHMP6-202ENST00000571457 ZC3H15Q8WU90 426 aaKnown RBP15.1■□□□□ 0.01
CHMP6-202ENST00000571457 MAP3K15Q6ZN16 1313 aa15.1■□□□□ 0.01
CHMP6-202ENST00000571457 TCERG1O14776 1098 aaKnown RBP15.09■□□□□ 0.01
CHMP6-202ENST00000571457 NOGQ13253 232 aa15.09■□□□□ 0.01
CHMP6-202ENST00000571457 CNGB1Q14028 1251 aaPredicted RBP15.09■□□□□ 0.01
CHMP6-202ENST00000571457 NGEFQ8N5V2 710 aa15.09■□□□□ 0.01
CHMP6-202ENST00000571457 PGAP2Q9UHJ9 254 aa15.09■□□□□ 0.01
CHMP6-202ENST00000571457 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0
CHMP6-202ENST00000571457 GPTP24298 496 aa15.08■□□□□ 0
CHMP6-202ENST00000571457 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0
CHMP6-202ENST00000571457 CXCL9Q07325 125 aa15.08■□□□□ 0
CHMP6-202ENST00000571457 AOC3Q16853 763 aa15.08■□□□□ 0
CHMP6-202ENST00000571457 CIAPIN1Q6FI81 312 aa15.08■□□□□ 0
CHMP6-202ENST00000571457 CDC37L1Q7L3B6 337 aa15.08■□□□□ 0
CHMP6-202ENST00000571457 NLRP3Q96P20 1036 aa15.08■□□□□ 0
CHMP6-202ENST00000571457 GLIS2Q9BZE0 524 aaPredicted RBP15.08■□□□□ 0
CHMP6-202ENST00000571457 ATP6V0A2Q9Y487 856 aa15.08■□□□□ 0
CHMP6-202ENST00000571457 NUP98P52948 1817 aa15.08■□□□□ 0
CHMP6-202ENST00000571457 GMPSP49915 693 aaPredicted RBP15.07■□□□□ 0
CHMP6-202ENST00000571457 TNIP1Q15025 636 aa15.07■□□□□ 0
CHMP6-202ENST00000571457 PPP1R42Q7Z4L9 355 aa15.07■□□□□ 0
CHMP6-202ENST00000571457 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
CHMP6-202ENST00000571457 BCL2L13Q9BXK5 485 aa15.07■□□□□ 0
CHMP6-202ENST00000571457 ZNF408Q9H9D4 720 aa15.07■□□□□ 0
CHMP6-202ENST00000571457 LAMB4A4D0S4 1761 aa15.06■□□□□ 0
CHMP6-202ENST00000571457 DCTN1Q14203 1278 aa15.06■□□□□ 0
CHMP6-202ENST00000571457 PARP10Q53GL7 1025 aa15.06■□□□□ 0
CHMP6-202ENST00000571457 SUSD4Q5VX71 490 aa15.06■□□□□ 0
CHMP6-202ENST00000571457 RTFDC1Q9BY42 306 aaPredicted RBP15.06■□□□□ 0
CHMP6-202ENST00000571457 RRP7AQ9Y3A4 280 aaKnown RBP15.06■□□□□ 0
CHMP6-202ENST00000571457 UBN2Q6ZU65 1347 aa15.06■□□□□ 0
CHMP6-202ENST00000571457 NTSR2O95665 410 aa15.05■□□□□ -0
CHMP6-202ENST00000571457 DPP8Q6V1X1 898 aaPredicted RBP15.05■□□□□ -0
CHMP6-202ENST00000571457 TTLL7Q6ZT98 887 aa15.05■□□□□ -0
CHMP6-202ENST00000571457 ZNF34Q8IZ26 560 aa15.05■□□□□ -0
CHMP6-202ENST00000571457 ZBTB3Q9H5J0 574 aa15.05■□□□□ -0
CHMP6-202ENST00000571457 H7C1D1 291 aa15.04■□□□□ -0
CHMP6-202ENST00000571457 BBOX1O75936 387 aa15.04■□□□□ -0
CHMP6-202ENST00000571457 MYL6BP14649 208 aa15.04■□□□□ -0
CHMP6-202ENST00000571457 HUNKP57058 714 aa15.04■□□□□ -0
CHMP6-202ENST00000571457 GIGYF2Q6Y7W6 1299 aaKnown RBP15.04■□□□□ -0
CHMP6-202ENST00000571457 MIS18AQ9NYP9 233 aa15.04■□□□□ -0
CHMP6-202ENST00000571457 NEFMP07197 916 aa15.03■□□□□ -0
CHMP6-202ENST00000571457 KIAA2012Q0VF49 1180 aa15.03■□□□□ -0
CHMP6-202ENST00000571457 MPNDQ8N594 471 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms