RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ANO6Q4KMQ2 910 aa18.17■□□□□ 0.5
USP43-202ENST00000570475 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
USP43-202ENST00000570475 CCDC186Q7Z3E2 898 aa18.17■□□□□ 0.5
USP43-202ENST00000570475 HDAC5Q9UQL6 1122 aa18.17■□□□□ 0.5
USP43-202ENST00000570475 CCDC171Q6TFL3 1326 aa18.17■□□□□ 0.5
USP43-202ENST00000570475 A0A0D9SFI3 127 aa18.17■□□□□ 0.5
USP43-202ENST00000570475 HTATSF1O43719 755 aaKnown RBP18.17■□□□□ 0.5
USP43-202ENST00000570475 CHGBP05060 677 aa18.17■□□□□ 0.5
USP43-202ENST00000570475 RAPGEF4Q8WZA2 1011 aa18.17■□□□□ 0.5
USP43-202ENST00000570475 ERCC4Q92889 916 aaPredicted RBP18.17■□□□□ 0.5
USP43-202ENST00000570475 CHMP4AQ9BY43 222 aa18.17■□□□□ 0.5
USP43-202ENST00000570475 JAK2O60674 1132 aa18.16■□□□□ 0.5
USP43-202ENST00000570475 UBE3BQ7Z3V4 1068 aa18.16■□□□□ 0.5
USP43-202ENST00000570475 TTC5Q8N0Z6 440 aa18.16■□□□□ 0.5
USP43-202ENST00000570475 GRM8O00222 908 aa18.16■□□□□ 0.5
USP43-202ENST00000570475 DYNC1I1O14576 645 aa18.16■□□□□ 0.5
USP43-202ENST00000570475 PDCP20941 246 aa18.16■□□□□ 0.5
USP43-202ENST00000570475 SF3A1Q15459 793 aaKnown RBP18.16■□□□□ 0.5
USP43-202ENST00000570475 SH2B1Q9NRF2 756 aaPredicted RBP18.16■□□□□ 0.5
USP43-202ENST00000570475 TTC6Q86TZ1 520 aa18.16■□□□□ 0.5
USP43-202ENST00000570475 DNAJC25Q9H1X3 360 aa18.16■□□□□ 0.5
USP43-202ENST00000570475 PREX1Q8TCU6 1659 aa18.16■□□□□ 0.5
USP43-202ENST00000570475 COL9A3Q14050 684 aaPredicted RBP18.15■□□□□ 0.5
USP43-202ENST00000570475 KSR2Q6VAB6 950 aa18.15■□□□□ 0.5
USP43-202ENST00000570475 COPS6Q7L5N1 327 aa18.15■□□□□ 0.5
USP43-202ENST00000570475 BRF1Q92994 677 aa18.15■□□□□ 0.5
USP43-202ENST00000570475 MAP7D2Q96T17 732 aa18.15■□□□□ 0.5
USP43-202ENST00000570475 SEC62Q99442 399 aaKnown RBP18.15■□□□□ 0.5
USP43-202ENST00000570475 TPD52L1Q16890 204 aaPredicted RBP18.15■□□□□ 0.5
USP43-202ENST00000570475 PYCARDQ9ULZ3 195 aa18.15■□□□□ 0.5
USP43-202ENST00000570475 TAF6LQ9Y6J9 622 aa18.15■□□□□ 0.5
USP43-202ENST00000570475 XAGE3Q8WTP9 111 aa18.14■□□□□ 0.49
USP43-202ENST00000570475 KIF20BQ96Q89 1820 aa18.14■□□□□ 0.49
USP43-202ENST00000570475 SALL3Q9BXA9 1300 aa18.14■□□□□ 0.49
USP43-202ENST00000570475 SLC27A2O14975 620 aa18.14■□□□□ 0.49
USP43-202ENST00000570475 LRMPQ12912 555 aa18.14■□□□□ 0.49
USP43-202ENST00000570475 VPS53Q5VIR6 699 aa18.14■□□□□ 0.49
USP43-202ENST00000570475 STK11IPQ8N1F8 1099 aa18.14■□□□□ 0.49
USP43-202ENST00000570475 HMGN5P82970 282 aaKnown RBP18.14■□□□□ 0.49
USP43-202ENST00000570475 TYRO3Q06418 890 aa18.14■□□□□ 0.49
USP43-202ENST00000570475 PPP4R3BQ5MIZ7 849 aa18.13■□□□□ 0.49
USP43-202ENST00000570475 UVSSAQ2YD98 709 aa18.13■□□□□ 0.49
USP43-202ENST00000570475 SLFNL1Q499Z3 407 aa18.13■□□□□ 0.49
USP43-202ENST00000570475 ANKRD24Q8TF21 1146 aa18.13■□□□□ 0.49
USP43-202ENST00000570475 ME1P48163 572 aa18.12■□□□□ 0.49
USP43-202ENST00000570475 ZNF165P49910 485 aa18.12■□□□□ 0.49
USP43-202ENST00000570475 TRMT1Q9NXH9 659 aaKnown RBP18.12■□□□□ 0.49
USP43-202ENST00000570475 KNDC1Q76NI1 1749 aa18.12■□□□□ 0.49
USP43-202ENST00000570475 PIBF1Q8WXW3 757 aa18.12■□□□□ 0.49
USP43-202ENST00000570475 SDF4Q9BRK5 362 aa18.12■□□□□ 0.49
USP43-202ENST00000570475 ZNF589Q86UQ0 364 aaPredicted RBP18.12■□□□□ 0.49
USP43-202ENST00000570475 NFATC2IPQ8NCF5 419 aa18.12■□□□□ 0.49
USP43-202ENST00000570475 TTC14Q96N46 770 aa18.12■□□□□ 0.49
USP43-202ENST00000570475 NRBP1Q9UHY1 535 aa18.12■□□□□ 0.49
USP43-202ENST00000570475 RPAP1Q9BWH6 1393 aaPredicted RBP18.11■□□□□ 0.49
USP43-202ENST00000570475 SIRT1Q96EB6 747 aa18.11■□□□□ 0.49
USP43-202ENST00000570475 ORAI2Q96SN7 254 aa18.11■□□□□ 0.49
USP43-202ENST00000570475 TTC41PQ6P2S7 1318 aa18.11■□□□□ 0.49
USP43-202ENST00000570475 POLA2Q14181 598 aa18.11■□□□□ 0.49
USP43-202ENST00000570475 WASHC4Q2M389 1173 aa18.11■□□□□ 0.49
USP43-202ENST00000570475 SNRKQ9NRH2 765 aa18.11■□□□□ 0.49
USP43-202ENST00000570475 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.11■□□□□ 0.49
USP43-202ENST00000570475 Q6ZUG5 572 aa18.11■□□□□ 0.49
USP43-202ENST00000570475 RNMTO43148 476 aaKnown RBP18.1■□□□□ 0.49
USP43-202ENST00000570475 FKBP4Q02790 459 aaKnown RBP eCLIP18.1■□□□□ 0.49
USP43-202ENST00000570475 IP6K1Q92551 441 aa18.1■□□□□ 0.49
USP43-202ENST00000570475 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.1■□□□□ 0.49
USP43-202ENST00000570475 V9GYY5 206 aaPredicted RBP18.1■□□□□ 0.49
USP43-202ENST00000570475 HIP1O00291 1037 aa18.1■□□□□ 0.49
USP43-202ENST00000570475 GOLIM4O00461 696 aa18.1■□□□□ 0.49
USP43-202ENST00000570475 ISM2Q6H9L7 571 aa18.1■□□□□ 0.49
USP43-202ENST00000570475 CCDC73Q6ZRK6 1079 aa18.1■□□□□ 0.49
USP43-202ENST00000570475 A0A087WZG4 1122 aa18.1■□□□□ 0.49
USP43-202ENST00000570475 HAND2P61296 217 aa18.1■□□□□ 0.49
USP43-202ENST00000570475 TFCP2Q12800 502 aa18.1■□□□□ 0.49
USP43-202ENST00000570475 AKAP4Q5JQC9 854 aa18.1■□□□□ 0.49
USP43-202ENST00000570475 PDCL2Q8N4E4 241 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 FAM200AQ8TCP9 573 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 FTOQ9C0B1 505 aaKnown RBP eCLIP18.09■□□□□ 0.49
USP43-202ENST00000570475 CEP170BQ9Y4F5 1589 aaPredicted RBP18.09■□□□□ 0.49
USP43-202ENST00000570475 SASH1O94885 1247 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 ANKRD1Q15327 319 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 LINS1Q8NG48 757 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 NEK1Q96PY6 1258 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 SCAND2PQ9GZW5 306 aaPredicted RBP18.09■□□□□ 0.49
USP43-202ENST00000570475 NCOA5Q9HCD5 579 aaKnown RBP18.09■□□□□ 0.49
USP43-202ENST00000570475 ZSWIM6Q9HCJ5 1215 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 CLIP2Q9UDT6 1046 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 OVOS2A0A0J9YW53 1432 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 OVOS2Q6IE36 1432 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 GIGYF1O75420 1035 aaPredicted RBP18.09■□□□□ 0.49
USP43-202ENST00000570475 HSP90AB3PQ58FF7 597 aa18.09■□□□□ 0.49
USP43-202ENST00000570475 AOX1Q06278 1338 aa18.08■□□□□ 0.49
USP43-202ENST00000570475 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.49
USP43-202ENST00000570475 GNL2Q13823 731 aaKnown RBP18.08■□□□□ 0.49
USP43-202ENST00000570475 CHRNA2Q15822 529 aa18.08■□□□□ 0.49
USP43-202ENST00000570475 RIOK3O14730 519 aaKnown RBP18.08■□□□□ 0.48
USP43-202ENST00000570475 NR1I2O75469 434 aa18.08■□□□□ 0.48
USP43-202ENST00000570475 GCP02774 474 aa18.08■□□□□ 0.48
USP43-202ENST00000570475 TAF7LQ5H9L4 462 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms