RNA–Protein interactions for RNA: ENST00000570403.1

TRAP1-203, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 521 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-203ENST00000570403 LTBP3Q9NS15 1303 aa29.39■■■□□ 2.3
TRAP1-203ENST00000570403 ZC3H4Q9UPT8 1303 aaKnown RBP29.39■■■□□ 2.3
TRAP1-203ENST00000570403 KIF3CO14782 793 aa29.38■■■□□ 2.29
TRAP1-203ENST00000570403 TSR2Q969E8 191 aaKnown RBP29.38■■■□□ 2.29
TRAP1-203ENST00000570403 TCIRG1Q13488 830 aa29.37■■■□□ 2.29
TRAP1-203ENST00000570403 SOGA3Q5TF21 947 aa29.37■■■□□ 2.29
TRAP1-203ENST00000570403 NLRP10Q86W26 655 aa29.37■■■□□ 2.29
TRAP1-203ENST00000570403 PLBD2Q8NHP8 589 aa29.37■■■□□ 2.29
TRAP1-203ENST00000570403 DDX60Q8IY21 1712 aaKnown RBP29.37■■■□□ 2.29
TRAP1-203ENST00000570403 UTP14AQ9BVJ6 771 aaKnown RBP29.36■■■□□ 2.29
TRAP1-203ENST00000570403 IL16Q14005 1332 aa29.36■■■□□ 2.29
TRAP1-203ENST00000570403 RNF123Q5XPI4 1314 aa29.36■■■□□ 2.29
TRAP1-203ENST00000570403 ANKRD13DQ6ZTN6 518 aa29.35■■■□□ 2.29
TRAP1-203ENST00000570403 TSPYL6Q8N831 410 aa29.35■■■□□ 2.29
TRAP1-203ENST00000570403 TAOK3Q9H2K8 898 aa29.35■■■□□ 2.29
TRAP1-203ENST00000570403 C3orf67Q6ZVT6 689 aa29.34■■■□□ 2.29
TRAP1-203ENST00000570403 NMRK2Q9NPI5 230 aa29.34■■■□□ 2.29
TRAP1-203ENST00000570403 ALDH1B1P30837 517 aa29.33■■■□□ 2.29
TRAP1-203ENST00000570403 FAM9BQ8IZU0 186 aa29.33■■■□□ 2.29
TRAP1-203ENST00000570403 SNED1Q8TER0 1413 aa29.33■■■□□ 2.29
TRAP1-203ENST00000570403 HOXA10P31260 410 aaPredicted RBP29.32■■■□□ 2.28
TRAP1-203ENST00000570403 CCDC93Q567U6 631 aa29.32■■■□□ 2.28
TRAP1-203ENST00000570403 SLC10A5Q5PT55 438 aa29.32■■■□□ 2.28
TRAP1-203ENST00000570403 PHAXQ9H814 394 aaKnown RBP29.32■■■□□ 2.28
TRAP1-203ENST00000570403 OLFM4Q6UX06 510 aa29.31■■■□□ 2.28
TRAP1-203ENST00000570403 RPGRQ92834 1020 aaKnown RBP29.31■■■□□ 2.28
TRAP1-203ENST00000570403 CACNA1FO60840 1977 aa29.31■■■□□ 2.28
TRAP1-203ENST00000570403 KDM2BQ8NHM5 1336 aa29.3■■■□□ 2.28
TRAP1-203ENST00000570403 ISCA1Q9BUE6 129 aa29.3■■■□□ 2.28
TRAP1-203ENST00000570403 CCDC30Q5VVM6 783 aa29.29■■■□□ 2.28
TRAP1-203ENST00000570403 SALL2Q9Y467 1007 aaPredicted RBP29.29■■■□□ 2.28
TRAP1-203ENST00000570403 TAF1P21675 1872 aa29.29■■■□□ 2.28
TRAP1-203ENST00000570403 SH3TC1Q8TE82 1336 aa29.28■■■□□ 2.28
TRAP1-203ENST00000570403 SYNE4Q8N205 404 aa29.28■■■□□ 2.28
TRAP1-203ENST00000570403 NLRP3Q96P20 1036 aa29.28■■■□□ 2.28
TRAP1-203ENST00000570403 TRMT112Q9UI30 125 aaKnown RBP29.28■■■□□ 2.28
TRAP1-203ENST00000570403 FANCIQ9NVI1 1328 aa29.27■■■□□ 2.28
TRAP1-203ENST00000570403 WDR63Q8IWG1 891 aa29.27■■■□□ 2.28
TRAP1-203ENST00000570403 CRAMP1Q96RY5 1269 aa29.27■■■□□ 2.28
TRAP1-203ENST00000570403 CHMP4AQ9BY43 222 aa29.27■■■□□ 2.28
TRAP1-203ENST00000570403 WDR90Q96KV7 1748 aa29.26■■■□□ 2.27
TRAP1-203ENST00000570403 GOLGA2Q08379 1002 aa29.26■■■□□ 2.27
TRAP1-203ENST00000570403 RBM17Q96I25 401 aaKnown RBP29.26■■■□□ 2.27
TRAP1-203ENST00000570403 GLTPD2A6NH11 291 aa29.25■■■□□ 2.27
TRAP1-203ENST00000570403 ATP5J2-PTCD1G3V325 749 aa29.25■■■□□ 2.27
TRAP1-203ENST00000570403 HCLS1P14317 486 aaPredicted RBP29.25■■■□□ 2.27
TRAP1-203ENST00000570403 FKBP4Q02790 459 aaKnown RBP eCLIP29.25■■■□□ 2.27
TRAP1-203ENST00000570403 TWISTNBQ3B726 338 aaPredicted RBP29.25■■■□□ 2.27
TRAP1-203ENST00000570403 ZNF428Q96B54 188 aa29.25■■■□□ 2.27
TRAP1-203ENST00000570403 CEP350Q5VT06 3117 aa29.25■■■□□ 2.27
TRAP1-203ENST00000570403 RIC3Q7Z5B4 369 aa29.24■■■□□ 2.27
TRAP1-203ENST00000570403 RTKN2Q8IZC4 609 aa29.24■■■□□ 2.27
TRAP1-203ENST00000570403 TRIM28Q13263 835 aaKnown RBP29.23■■■□□ 2.27
TRAP1-203ENST00000570403 SLC51AQ86UW1 340 aa29.23■■■□□ 2.27
TRAP1-203ENST00000570403 ABCC4O15439 1325 aa29.21■■■□□ 2.27
TRAP1-203ENST00000570403 PPEF1O14829 653 aaPredicted RBP29.21■■■□□ 2.27
TRAP1-203ENST00000570403 TOMM70O94826 608 aa29.21■■■□□ 2.27
TRAP1-203ENST00000570403 RRAGCQ9HB90 399 aa29.21■■■□□ 2.27
TRAP1-203ENST00000570403 CC2D2BQ6DHV5 1058 aa29.2■■■□□ 2.26
TRAP1-203ENST00000570403 FAM89AQ96GI7 184 aa29.2■■■□□ 2.26
TRAP1-203ENST00000570403 SPINK5Q9NQ38 1064 aaPredicted RBP29.2■■■□□ 2.26
TRAP1-203ENST00000570403 ZNF277Q9NRM2 450 aaPredicted RBP29.2■■■□□ 2.26
TRAP1-203ENST00000570403 LRRC37AA6NMS7 1700 aa29.2■■■□□ 2.26
TRAP1-203ENST00000570403 TCERG1O14776 1098 aaKnown RBP29.19■■■□□ 2.26
TRAP1-203ENST00000570403 PSMD1Q99460 953 aa29.19■■■□□ 2.26
TRAP1-203ENST00000570403 STK31Q9BXU1 1019 aa29.19■■■□□ 2.26
TRAP1-203ENST00000570403 CCER2I3L3R5 266 aa29.18■■■□□ 2.26
TRAP1-203ENST00000570403 DDX58O95786 925 aaKnown RBP29.18■■■□□ 2.26
TRAP1-203ENST00000570403 MYD88Q99836 296 aa29.18■■■□□ 2.26
TRAP1-203ENST00000570403 COL4A1P02462 1669 aa29.17■■■□□ 2.26
TRAP1-203ENST00000570403 COL4A5P29400 1685 aa29.17■■■□□ 2.26
TRAP1-203ENST00000570403 DPY19L2Q6NUT2 758 aa29.16■■■□□ 2.26
TRAP1-203ENST00000570403 METTL22Q9BUU2 404 aaPredicted RBP29.16■■■□□ 2.26
TRAP1-203ENST00000570403 ZNF521Q96K83 1311 aa29.16■■■□□ 2.26
TRAP1-203ENST00000570403 IARSP41252 1262 aaKnown RBP29.15■■■□□ 2.26
TRAP1-203ENST00000570403 GRIPAP1Q4V328 841 aa29.15■■■□□ 2.26
TRAP1-203ENST00000570403 RTL5Q5HYW3 569 aaPredicted RBP29.15■■■□□ 2.26
TRAP1-203ENST00000570403 MAP3K2Q9Y2U5 619 aa29.15■■■□□ 2.26
TRAP1-203ENST00000570403 ATP6V0A2Q9Y487 856 aa29.15■■■□□ 2.26
TRAP1-203ENST00000570403 MYH3P11055 1940 aa29.14■■■□□ 2.26
TRAP1-203ENST00000570403 EXOSC9Q06265 439 aaKnown RBP29.14■■■□□ 2.26
TRAP1-203ENST00000570403 KSR2Q6VAB6 950 aa29.14■■■□□ 2.26
TRAP1-203ENST00000570403 G2E3Q7L622 706 aa29.14■■■□□ 2.26
TRAP1-203ENST00000570403 C16orf71Q8IYS4 520 aaPredicted RBP29.14■■■□□ 2.26
TRAP1-203ENST00000570403 CCDC191Q8NCU4 936 aa29.14■■■□□ 2.26
TRAP1-203ENST00000570403 RBM46Q8TBY0 533 aaKnown RBP29.14■■■□□ 2.26
TRAP1-203ENST00000570403 SCN4AP35499 1836 aa29.13■■■□□ 2.25
TRAP1-203ENST00000570403 PI4KAP2A4QPH2 592 aa29.13■■■□□ 2.25
TRAP1-203ENST00000570403 POTECB2RU33 542 aa29.13■■■□□ 2.25
TRAP1-203ENST00000570403 VAMP4O75379 141 aa29.13■■■□□ 2.25
TRAP1-203ENST00000570403 SLC4A2P04920 1241 aa29.13■■■□□ 2.25
TRAP1-203ENST00000570403 HSPA6P17066 643 aa29.13■■■□□ 2.25
TRAP1-203ENST00000570403 DDX46Q7L014 1031 aaKnown RBP29.13■■■□□ 2.25
TRAP1-203ENST00000570403 PI4KAP1Q8N8J0 262 aa29.13■■■□□ 2.25
TRAP1-203ENST00000570403 ZBTB38Q8NAP3 1195 aaPredicted RBP29.13■■■□□ 2.25
TRAP1-203ENST00000570403 IRS4O14654 1257 aaPredicted RBP29.12■■■□□ 2.25
TRAP1-203ENST00000570403 VEGFAP15692 232 aaPredicted RBP29.12■■■□□ 2.25
TRAP1-203ENST00000570403 GRAPQ13588 217 aa29.12■■■□□ 2.25
TRAP1-203ENST00000570403 SF3B3Q15393 1217 aaKnown RBP29.12■■■□□ 2.25
TRAP1-203ENST00000570403 GRAPLQ8TC17 118 aaPredicted RBP29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms