RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 RTKN2Q8IZC4 609 aa22.25■■□□□ 1.15
MAP1LC3B-208ENST00000570189 MBIPQ9NS73 344 aa22.25■■□□□ 1.15
MAP1LC3B-208ENST00000570189 ANXA1P04083 346 aa22.24■■□□□ 1.15
MAP1LC3B-208ENST00000570189 HDGFL1Q5TGJ6 251 aa22.24■■□□□ 1.15
MAP1LC3B-208ENST00000570189 XAGE3Q8WTP9 111 aa22.24■■□□□ 1.15
MAP1LC3B-208ENST00000570189 ZNF219Q9P2Y4 722 aaPredicted RBP22.24■■□□□ 1.15
MAP1LC3B-208ENST00000570189 DBF4Q9UBU7 674 aaPredicted RBP22.24■■□□□ 1.15
MAP1LC3B-208ENST00000570189 LAS1LQ9Y4W2 734 aaKnown RBP22.24■■□□□ 1.15
MAP1LC3B-208ENST00000570189 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
MAP1LC3B-208ENST00000570189 FKBP4Q02790 459 aaKnown RBP eCLIP22.23■■□□□ 1.15
MAP1LC3B-208ENST00000570189 GRIPAP1Q4V328 841 aa22.23■■□□□ 1.15
MAP1LC3B-208ENST00000570189 CC2D2BQ6DHV5 1058 aa22.23■■□□□ 1.15
MAP1LC3B-208ENST00000570189 DPY19L2Q6NUT2 758 aa22.23■■□□□ 1.15
MAP1LC3B-208ENST00000570189 CRAMP1Q96RY5 1269 aa22.23■■□□□ 1.15
MAP1LC3B-208ENST00000570189 RRAGCQ9HB90 399 aa22.23■■□□□ 1.15
MAP1LC3B-208ENST00000570189 CHPF2Q9P2E5 772 aa22.23■■□□□ 1.15
MAP1LC3B-208ENST00000570189 SCN4AP35499 1836 aa22.22■■□□□ 1.15
MAP1LC3B-208ENST00000570189 VEGFAP15692 232 aaPredicted RBP22.22■■□□□ 1.15
MAP1LC3B-208ENST00000570189 TCIRG1Q13488 830 aa22.22■■□□□ 1.15
MAP1LC3B-208ENST00000570189 CCDC27Q2M243 656 aa22.22■■□□□ 1.15
MAP1LC3B-208ENST00000570189 DUSP27Q5VZP5 1158 aa22.22■■□□□ 1.15
MAP1LC3B-208ENST00000570189 C16orf71Q8IYS4 520 aaPredicted RBP22.22■■□□□ 1.15
MAP1LC3B-208ENST00000570189 UTP14AQ9BVJ6 771 aaKnown RBP22.22■■□□□ 1.15
MAP1LC3B-208ENST00000570189 APLP1P51693 650 aa22.21■■□□□ 1.15
MAP1LC3B-208ENST00000570189 PSMD1Q99460 953 aa22.21■■□□□ 1.15
MAP1LC3B-208ENST00000570189 HYPKQ9NX55 129 aa22.21■■□□□ 1.15
MAP1LC3B-208ENST00000570189 CCDC184Q52MB2 194 aa22.2■■□□□ 1.14
MAP1LC3B-208ENST00000570189 NLRP10Q86W26 655 aa22.2■■□□□ 1.14
MAP1LC3B-208ENST00000570189 PLBD2Q8NHP8 589 aa22.2■■□□□ 1.14
MAP1LC3B-208ENST00000570189 NECTIN2Q92692 538 aa22.2■■□□□ 1.14
MAP1LC3B-208ENST00000570189 RPGRQ92834 1020 aaKnown RBP22.2■■□□□ 1.14
MAP1LC3B-208ENST00000570189 DDX60Q8IY21 1712 aaKnown RBP22.2■■□□□ 1.14
MAP1LC3B-208ENST00000570189 NLRP3Q96P20 1036 aa22.19■■□□□ 1.14
MAP1LC3B-208ENST00000570189 POTECB2RU33 542 aa22.18■■□□□ 1.14
MAP1LC3B-208ENST00000570189 AIMP1Q12904 312 aaKnown RBP22.18■■□□□ 1.14
MAP1LC3B-208ENST00000570189 RBM17Q96I25 401 aaKnown RBP22.18■■□□□ 1.14
MAP1LC3B-208ENST00000570189 CHMP4AQ9BY43 222 aa22.18■■□□□ 1.14
MAP1LC3B-208ENST00000570189 ANKRD13DQ6ZTN6 518 aa22.17■■□□□ 1.14
MAP1LC3B-208ENST00000570189 SMC1BQ8NDV3 1235 aa22.17■■□□□ 1.14
MAP1LC3B-208ENST00000570189 C3orf67Q6ZVT6 689 aa22.16■■□□□ 1.14
MAP1LC3B-208ENST00000570189 L3MBTL3Q96JM7 780 aaPredicted RBP22.16■■□□□ 1.14
MAP1LC3B-208ENST00000570189 ISCA1Q9BUE6 129 aa22.16■■□□□ 1.14
MAP1LC3B-208ENST00000570189 SH3TC1Q8TE82 1336 aa22.15■■□□□ 1.14
MAP1LC3B-208ENST00000570189 TRIM28Q13263 835 aaKnown RBP22.15■■□□□ 1.14
MAP1LC3B-208ENST00000570189 OLFM4Q6UX06 510 aa22.15■■□□□ 1.14
MAP1LC3B-208ENST00000570189 CACNA1FO60840 1977 aa22.15■■□□□ 1.14
MAP1LC3B-208ENST00000570189 ANP32CO43423 234 aa22.14■■□□□ 1.13
MAP1LC3B-208ENST00000570189 IARSP41252 1262 aaKnown RBP22.14■■□□□ 1.13
MAP1LC3B-208ENST00000570189 LRRC37AA6NMS7 1700 aa22.14■■□□□ 1.13
MAP1LC3B-208ENST00000570189 IL16Q14005 1332 aa22.13■■□□□ 1.13
MAP1LC3B-208ENST00000570189 FZD9O00144 591 aa22.13■■□□□ 1.13
MAP1LC3B-208ENST00000570189 SYNE4Q8N205 404 aa22.13■■□□□ 1.13
MAP1LC3B-208ENST00000570189 ZNF277Q9NRM2 450 aaPredicted RBP22.13■■□□□ 1.13
MAP1LC3B-208ENST00000570189 TRMT112Q9UI30 125 aaKnown RBP22.13■■□□□ 1.13
MAP1LC3B-208ENST00000570189 PPEF1O14829 653 aaPredicted RBP22.12■■□□□ 1.13
MAP1LC3B-208ENST00000570189 WWC1Q8IX03 1113 aa22.12■■□□□ 1.13
MAP1LC3B-208ENST00000570189 ABCC4O15439 1325 aa22.11■■□□□ 1.13
MAP1LC3B-208ENST00000570189 C8orf58Q8NAV2 365 aa22.11■■□□□ 1.13
MAP1LC3B-208ENST00000570189 VPS33BQ9H267 617 aa22.11■■□□□ 1.13
MAP1LC3B-208ENST00000570189 MRS2Q9HD23 443 aa22.11■■□□□ 1.13
MAP1LC3B-208ENST00000570189 ATP6V0A2Q9Y487 856 aa22.11■■□□□ 1.13
MAP1LC3B-208ENST00000570189 IQCA1LA6NCM1 817 aa22.1■■□□□ 1.13
MAP1LC3B-208ENST00000570189 BBOX1O75936 387 aa22.1■■□□□ 1.13
MAP1LC3B-208ENST00000570189 DDNO94850 711 aaPredicted RBP22.1■■□□□ 1.13
MAP1LC3B-208ENST00000570189 TAF1P21675 1872 aa22.1■■□□□ 1.13
MAP1LC3B-208ENST00000570189 DNAJC5GQ8N7S2 189 aa22.1■■□□□ 1.13
MAP1LC3B-208ENST00000570189 COL4A5P29400 1685 aa22.1■■□□□ 1.13
MAP1LC3B-208ENST00000570189 ADAMTSL1Q8N6G6 1762 aa22.1■■□□□ 1.13
MAP1LC3B-208ENST00000570189 CCDC30Q5VVM6 783 aa22.09■■□□□ 1.13
MAP1LC3B-208ENST00000570189 RTFDC1Q9BY42 306 aaPredicted RBP22.09■■□□□ 1.13
MAP1LC3B-208ENST00000570189 GOLGA2Q08379 1002 aa22.08■■□□□ 1.13
MAP1LC3B-208ENST00000570189 TMC4Q7Z404 712 aa22.08■■□□□ 1.13
MAP1LC3B-208ENST00000570189 ZNF541Q9H0D2 1346 aa22.07■■□□□ 1.12
MAP1LC3B-208ENST00000570189 HCLS1P14317 486 aaPredicted RBP22.07■■□□□ 1.12
MAP1LC3B-208ENST00000570189 SF3B3Q15393 1217 aaKnown RBP22.07■■□□□ 1.12
MAP1LC3B-208ENST00000570189 SP8Q8IXZ3 490 aa22.07■■□□□ 1.12
MAP1LC3B-208ENST00000570189 JDP2Q8WYK2 163 aa22.07■■□□□ 1.12
MAP1LC3B-208ENST00000570189 GRAPQ13588 217 aa22.06■■□□□ 1.12
MAP1LC3B-208ENST00000570189 DDX46Q7L014 1031 aaKnown RBP22.06■■□□□ 1.12
MAP1LC3B-208ENST00000570189 GPC2Q8N158 579 aa22.06■■□□□ 1.12
MAP1LC3B-208ENST00000570189 GRAPLQ8TC17 118 aaPredicted RBP22.06■■□□□ 1.12
MAP1LC3B-208ENST00000570189 PHAXQ9H814 394 aaKnown RBP22.06■■□□□ 1.12
MAP1LC3B-208ENST00000570189 ELL2O00472 640 aaPredicted RBP22.05■■□□□ 1.12
MAP1LC3B-208ENST00000570189 TSPYL6Q8N831 410 aa22.05■■□□□ 1.12
MAP1LC3B-208ENST00000570189 TMX4Q9H1E5 349 aaPredicted RBP22.05■■□□□ 1.12
MAP1LC3B-208ENST00000570189 LTBP1Q14766 1721 aa22.04■■□□□ 1.12
MAP1LC3B-208ENST00000570189 ATP5J2-PTCD1G3V325 749 aa22.04■■□□□ 1.12
MAP1LC3B-208ENST00000570189 DDX58O95786 925 aaKnown RBP22.04■■□□□ 1.12
MAP1LC3B-208ENST00000570189 RIC3Q7Z5B4 369 aa22.04■■□□□ 1.12
MAP1LC3B-208ENST00000570189 ZBTB38Q8NAP3 1195 aaPredicted RBP22.04■■□□□ 1.12
MAP1LC3B-208ENST00000570189 CCDC191Q8NCU4 936 aa22.04■■□□□ 1.12
MAP1LC3B-208ENST00000570189 SUPT20HQ8NEM7 779 aa22.04■■□□□ 1.12
MAP1LC3B-208ENST00000570189 TAF1DQ9H5J8 278 aaPredicted RBP22.04■■□□□ 1.12
MAP1LC3B-208ENST00000570189 DUOX1Q9NRD9 1551 aa22.04■■□□□ 1.12
MAP1LC3B-208ENST00000570189 HSP90B1P14625 803 aaKnown RBP22.03■■□□□ 1.12
MAP1LC3B-208ENST00000570189 CHADLQ6NUI6 762 aa22.03■■□□□ 1.12
MAP1LC3B-208ENST00000570189 WDR63Q8IWG1 891 aa22.03■■□□□ 1.12
MAP1LC3B-208ENST00000570189 TSR2Q969E8 191 aaKnown RBP22.03■■□□□ 1.12
MAP1LC3B-208ENST00000570189 FAM89AQ96GI7 184 aa22.03■■□□□ 1.12
MAP1LC3B-208ENST00000570189 MYH3P11055 1940 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms