RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 TNRC18O15417 2968 aaPredicted RBP13.57□□□□□ -0.24
RPAP1-212ENST00000569829 CLEC4GQ6UXB4 293 aa13.57□□□□□ -0.24
RPAP1-212ENST00000569829 RTKN2Q8IZC4 609 aa13.57□□□□□ -0.24
RPAP1-212ENST00000569829 GPR101Q96P66 508 aaPredicted RBP13.57□□□□□ -0.24
RPAP1-212ENST00000569829 CASP8AP2Q9UKL3 1982 aa13.57□□□□□ -0.24
RPAP1-212ENST00000569829 MLLT1Q03111 559 aaPredicted RBP13.56□□□□□ -0.24
RPAP1-212ENST00000569829 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
RPAP1-212ENST00000569829 CFAP44Q96MT7 982 aa13.56□□□□□ -0.24
RPAP1-212ENST00000569829 RSPH6AQ9H0K4 717 aa13.56□□□□□ -0.24
RPAP1-212ENST00000569829 SNRPA1P09661 255 aaKnown RBP13.55□□□□□ -0.24
RPAP1-212ENST00000569829 DLK2Q6UY11 383 aa13.55□□□□□ -0.24
RPAP1-212ENST00000569829 JDP2Q8WYK2 163 aa13.55□□□□□ -0.24
RPAP1-212ENST00000569829 ZIC5Q96T25 663 aa13.55□□□□□ -0.24
RPAP1-212ENST00000569829 ZNF652Q9Y2D9 606 aa13.55□□□□□ -0.24
RPAP1-212ENST00000569829 THSD7BQ9C0I4 1608 aa13.54□□□□□ -0.24
RPAP1-212ENST00000569829 GTF2E1P29083 439 aaPredicted RBP13.54□□□□□ -0.24
RPAP1-212ENST00000569829 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
RPAP1-212ENST00000569829 EIF6P56537 245 aaKnown RBP13.54□□□□□ -0.24
RPAP1-212ENST00000569829 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
RPAP1-212ENST00000569829 PSMD1Q99460 953 aa13.54□□□□□ -0.24
RPAP1-212ENST00000569829 GPTP24298 496 aa13.53□□□□□ -0.24
RPAP1-212ENST00000569829 RGS19P49795 217 aa13.53□□□□□ -0.24
RPAP1-212ENST00000569829 CRY2Q49AN0 593 aa13.53□□□□□ -0.24
RPAP1-212ENST00000569829 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
RPAP1-212ENST00000569829 GLIS2Q9BZE0 524 aaPredicted RBP13.53□□□□□ -0.24
RPAP1-212ENST00000569829 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
RPAP1-212ENST00000569829 TLL2Q9Y6L7 1015 aa13.53□□□□□ -0.24
RPAP1-212ENST00000569829 TRPM7Q96QT4 1865 aa13.53□□□□□ -0.24
RPAP1-212ENST00000569829 SHTN1A0MZ66 631 aa13.52□□□□□ -0.25
RPAP1-212ENST00000569829 LMOD1P29536 600 aaPredicted RBP13.52□□□□□ -0.25
RPAP1-212ENST00000569829 UBN2Q6ZU65 1347 aa13.52□□□□□ -0.25
RPAP1-212ENST00000569829 CELF2O95319 508 aaKnown RBP13.51□□□□□ -0.25
RPAP1-212ENST00000569829 AOC3Q16853 763 aa13.51□□□□□ -0.25
RPAP1-212ENST00000569829 SUSD4Q5VX71 490 aa13.51□□□□□ -0.25
RPAP1-212ENST00000569829 BEGAINQ9BUH8 593 aa13.51□□□□□ -0.25
RPAP1-212ENST00000569829 NUP98P52948 1817 aa13.5□□□□□ -0.25
RPAP1-212ENST00000569829 ECE1P42892 770 aa13.5□□□□□ -0.25
RPAP1-212ENST00000569829 HIRAP54198 1017 aaPredicted RBP13.5□□□□□ -0.25
RPAP1-212ENST00000569829 SAPCD2Q86UD0 394 aa13.5□□□□□ -0.25
RPAP1-212ENST00000569829 ZBTB3Q9H5J0 574 aa13.5□□□□□ -0.25
RPAP1-212ENST00000569829 ZNF408Q9H9D4 720 aa13.5□□□□□ -0.25
RPAP1-212ENST00000569829 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
RPAP1-212ENST00000569829 PPEF1O14829 653 aaPredicted RBP13.49□□□□□ -0.25
RPAP1-212ENST00000569829 PPIP5K2O43314 1243 aa13.49□□□□□ -0.25
RPAP1-212ENST00000569829 MYL6BP14649 208 aa13.49□□□□□ -0.25
RPAP1-212ENST00000569829 CXCL9Q07325 125 aa13.49□□□□□ -0.25
RPAP1-212ENST00000569829 CIAPIN1Q6FI81 312 aa13.49□□□□□ -0.25
RPAP1-212ENST00000569829 USP50Q70EL3 339 aaPredicted RBP13.49□□□□□ -0.25
RPAP1-212ENST00000569829 RPGRQ92834 1020 aaKnown RBP13.49□□□□□ -0.25
RPAP1-212ENST00000569829 ZNF428Q96B54 188 aa13.49□□□□□ -0.25
RPAP1-212ENST00000569829 GPRC5DQ9NZD1 345 aa13.49□□□□□ -0.25
RPAP1-212ENST00000569829 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
RPAP1-212ENST00000569829 GMPSP49915 693 aaPredicted RBP13.48□□□□□ -0.25
RPAP1-212ENST00000569829 DGKZQ13574 1117 aa13.48□□□□□ -0.25
RPAP1-212ENST00000569829 NIM1KQ8IY84 436 aa13.48□□□□□ -0.25
RPAP1-212ENST00000569829 TRPM4Q8TD43 1214 aa13.48□□□□□ -0.25
RPAP1-212ENST00000569829 RTF1Q92541 710 aaKnown RBP13.48□□□□□ -0.25
RPAP1-212ENST00000569829 MAP3K15Q6ZN16 1313 aa13.47□□□□□ -0.25
RPAP1-212ENST00000569829 NTSR2O95665 410 aa13.47□□□□□ -0.25
RPAP1-212ENST00000569829 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
RPAP1-212ENST00000569829 PPP2R1AP30153 589 aa13.47□□□□□ -0.25
RPAP1-212ENST00000569829 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPAP1-212ENST00000569829 THUMPD2Q9BTF0 503 aaKnown RBP13.47□□□□□ -0.25
RPAP1-212ENST00000569829 ADARB2Q9NS39 739 aaKnown RBP13.47□□□□□ -0.25
RPAP1-212ENST00000569829 PDE4DIPQ5VU43 2346 aa13.47□□□□□ -0.25
RPAP1-212ENST00000569829 RAD17O75943 681 aa13.46□□□□□ -0.25
RPAP1-212ENST00000569829 MAP2K2P36507 400 aa13.46□□□□□ -0.25
RPAP1-212ENST00000569829 CFAP53Q96M91 514 aa13.46□□□□□ -0.25
RPAP1-212ENST00000569829 NYXQ9GZU5 481 aa13.46□□□□□ -0.25
RPAP1-212ENST00000569829 RIC1Q4ADV7 1423 aa13.46□□□□□ -0.26
RPAP1-212ENST00000569829 TAF7Q15545 349 aaPredicted RBP13.45□□□□□ -0.26
RPAP1-212ENST00000569829 CC2D2BQ6DHV5 1058 aa13.45□□□□□ -0.26
RPAP1-212ENST00000569829 ZNF34Q8IZ26 560 aa13.45□□□□□ -0.26
RPAP1-212ENST00000569829 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
RPAP1-212ENST00000569829 CRAMP1Q96RY5 1269 aa13.45□□□□□ -0.26
RPAP1-212ENST00000569829 NUDCQ9Y266 331 aa13.45□□□□□ -0.26
RPAP1-212ENST00000569829 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
RPAP1-212ENST00000569829 TAF1P21675 1872 aa13.44□□□□□ -0.26
RPAP1-212ENST00000569829 ABCC4O15439 1325 aa13.44□□□□□ -0.26
RPAP1-212ENST00000569829 YDJCA8MPS7 323 aa13.44□□□□□ -0.26
RPAP1-212ENST00000569829 ERVV-1B6SEH8 477 aa13.44□□□□□ -0.26
RPAP1-212ENST00000569829 RGL2O15211 777 aa13.44□□□□□ -0.26
RPAP1-212ENST00000569829 ANXA1P04083 346 aa13.44□□□□□ -0.26
RPAP1-212ENST00000569829 SOX10P56693 466 aa13.44□□□□□ -0.26
RPAP1-212ENST00000569829 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
RPAP1-212ENST00000569829 EGFRP00533 1210 aa13.43□□□□□ -0.26
RPAP1-212ENST00000569829 EIF4A1P60842 406 aaKnown RBP13.43□□□□□ -0.26
RPAP1-212ENST00000569829 KIF6Q6ZMV9 814 aa13.43□□□□□ -0.26
RPAP1-212ENST00000569829 USP48Q86UV5 1035 aa13.43□□□□□ -0.26
RPAP1-212ENST00000569829 ZNRF3Q9ULT6 936 aa13.43□□□□□ -0.26
RPAP1-212ENST00000569829 ATP6V0A2Q9Y487 856 aa13.43□□□□□ -0.26
RPAP1-212ENST00000569829 POLR2AP24928 1970 aaKnown RBP13.42□□□□□ -0.26
RPAP1-212ENST00000569829 BRPF1P55201 1214 aaPredicted RBP13.42□□□□□ -0.26
RPAP1-212ENST00000569829 SAMD7Q7Z3H4 446 aa13.42□□□□□ -0.26
RPAP1-212ENST00000569829 BCL2L13Q9BXK5 485 aa13.42□□□□□ -0.26
RPAP1-212ENST00000569829 PGAP2Q9UHJ9 254 aa13.42□□□□□ -0.26
RPAP1-212ENST00000569829 KDM3BQ7LBC6 1761 aa13.42□□□□□ -0.26
RPAP1-212ENST00000569829 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
RPAP1-212ENST00000569829 HCLS1P14317 486 aaPredicted RBP13.41□□□□□ -0.26
RPAP1-212ENST00000569829 HUNKP57058 714 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms