RNA–Protein interactions for RNA: ENST00000569746.1

ITGAM-207, Transcript of integrin subunit alpha M, humanhuman

TSL 3

Gene ITGAM, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-207ENST00000569746 C8orf58Q8NAV2 365 aa18.23■□□□□ 0.51
ITGAM-207ENST00000569746 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
ITGAM-207ENST00000569746 DICER1Q9UPY3 1922 aaKnown RBP18.23■□□□□ 0.51
ITGAM-207ENST00000569746 TCIRG1Q13488 830 aa18.22■□□□□ 0.51
ITGAM-207ENST00000569746 PLBD2Q8NHP8 589 aa18.22■□□□□ 0.51
ITGAM-207ENST00000569746 LMNB1P20700 586 aa18.21■□□□□ 0.51
ITGAM-207ENST00000569746 ALDH1B1P30837 517 aa18.21■□□□□ 0.51
ITGAM-207ENST00000569746 SOGA3Q5TF21 947 aa18.21■□□□□ 0.51
ITGAM-207ENST00000569746 UTP14AQ9BVJ6 771 aaKnown RBP18.21■□□□□ 0.51
ITGAM-207ENST00000569746 RNF123Q5XPI4 1314 aa18.21■□□□□ 0.51
ITGAM-207ENST00000569746 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
ITGAM-207ENST00000569746 CRY2Q49AN0 593 aa18.2■□□□□ 0.5
ITGAM-207ENST00000569746 RPGRQ92834 1020 aaKnown RBP18.2■□□□□ 0.5
ITGAM-207ENST00000569746 DDX60Q8IY21 1712 aaKnown RBP18.2■□□□□ 0.5
ITGAM-207ENST00000569746 PRELPP51888 382 aa18.19■□□□□ 0.5
ITGAM-207ENST00000569746 C1QTNF8P60827 252 aa18.19■□□□□ 0.5
ITGAM-207ENST00000569746 GOLGA2Q08379 1002 aa18.19■□□□□ 0.5
ITGAM-207ENST00000569746 NLRP10Q86W26 655 aa18.19■□□□□ 0.5
ITGAM-207ENST00000569746 TSPYL6Q8N831 410 aa18.19■□□□□ 0.5
ITGAM-207ENST00000569746 TAOK3Q9H2K8 898 aa18.19■□□□□ 0.5
ITGAM-207ENST00000569746 FANCIQ9NVI1 1328 aa18.19■□□□□ 0.5
ITGAM-207ENST00000569746 ZC3H4Q9UPT8 1303 aaKnown RBP18.19■□□□□ 0.5
ITGAM-207ENST00000569746 CCDC93Q567U6 631 aa18.18■□□□□ 0.5
ITGAM-207ENST00000569746 SLC10A5Q5PT55 438 aa18.18■□□□□ 0.5
ITGAM-207ENST00000569746 LTBP3Q9NS15 1303 aa18.18■□□□□ 0.5
ITGAM-207ENST00000569746 DDX58O95786 925 aaKnown RBP18.17■□□□□ 0.5
ITGAM-207ENST00000569746 TWISTNBQ3B726 338 aaPredicted RBP18.17■□□□□ 0.5
ITGAM-207ENST00000569746 ZNF428Q96B54 188 aa18.17■□□□□ 0.5
ITGAM-207ENST00000569746 NLRP3Q96P20 1036 aa18.17■□□□□ 0.5
ITGAM-207ENST00000569746 STK31Q9BXU1 1019 aa18.17■□□□□ 0.5
ITGAM-207ENST00000569746 MYH16Q9H6N6 1097 aa18.17■□□□□ 0.5
ITGAM-207ENST00000569746 PHAXQ9H814 394 aaKnown RBP18.17■□□□□ 0.5
ITGAM-207ENST00000569746 TRMT112Q9UI30 125 aaKnown RBP18.17■□□□□ 0.5
ITGAM-207ENST00000569746 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
ITGAM-207ENST00000569746 TRIM28Q13263 835 aaKnown RBP18.16■□□□□ 0.5
ITGAM-207ENST00000569746 C3orf67Q6ZVT6 689 aa18.16■□□□□ 0.5
ITGAM-207ENST00000569746 RIC3Q7Z5B4 369 aa18.16■□□□□ 0.5
ITGAM-207ENST00000569746 SH3TC1Q8TE82 1336 aa18.16■□□□□ 0.5
ITGAM-207ENST00000569746 ATP5J2-PTCD1G3V325 749 aa18.15■□□□□ 0.5
ITGAM-207ENST00000569746 HOXA10P31260 410 aaPredicted RBP18.15■□□□□ 0.5
ITGAM-207ENST00000569746 C7orf43Q8WVR3 580 aa18.15■□□□□ 0.5
ITGAM-207ENST00000569746 RBM17Q96I25 401 aaKnown RBP18.15■□□□□ 0.5
ITGAM-207ENST00000569746 NMRK2Q9NPI5 230 aa18.15■□□□□ 0.5
ITGAM-207ENST00000569746 CACNA1FO60840 1977 aa18.14■□□□□ 0.49
ITGAM-207ENST00000569746 KIF3CO14782 793 aa18.14■□□□□ 0.49
ITGAM-207ENST00000569746 HCLS1P14317 486 aaPredicted RBP18.14■□□□□ 0.49
ITGAM-207ENST00000569746 OLFM4Q6UX06 510 aa18.14■□□□□ 0.49
ITGAM-207ENST00000569746 ISCA1Q9BUE6 129 aa18.14■□□□□ 0.49
ITGAM-207ENST00000569746 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
ITGAM-207ENST00000569746 GRIPAP1Q4V328 841 aa18.13■□□□□ 0.49
ITGAM-207ENST00000569746 SYNE4Q8N205 404 aa18.13■□□□□ 0.49
ITGAM-207ENST00000569746 CRAMP1Q96RY5 1269 aa18.13■□□□□ 0.49
ITGAM-207ENST00000569746 PPEF1O14829 653 aaPredicted RBP18.12■□□□□ 0.49
ITGAM-207ENST00000569746 SLC4A2P04920 1241 aa18.12■□□□□ 0.49
ITGAM-207ENST00000569746 HSP90B1P14625 803 aaKnown RBP18.12■□□□□ 0.49
ITGAM-207ENST00000569746 FKBP4Q02790 459 aaKnown RBP eCLIP18.12■□□□□ 0.49
ITGAM-207ENST00000569746 CC2D2BQ6DHV5 1058 aa18.12■□□□□ 0.49
ITGAM-207ENST00000569746 RTKN2Q8IZC4 609 aa18.12■□□□□ 0.49
ITGAM-207ENST00000569746 SNED1Q8TER0 1413 aa18.12■□□□□ 0.49
ITGAM-207ENST00000569746 TAF1P21675 1872 aa18.12■□□□□ 0.49
ITGAM-207ENST00000569746 VAMP4O75379 141 aa18.11■□□□□ 0.49
ITGAM-207ENST00000569746 MYD88Q99836 296 aa18.11■□□□□ 0.49
ITGAM-207ENST00000569746 ABCC4O15439 1325 aa18.11■□□□□ 0.49
ITGAM-207ENST00000569746 EXOSC9Q06265 439 aaKnown RBP18.1■□□□□ 0.49
ITGAM-207ENST00000569746 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
ITGAM-207ENST00000569746 DIEXFQ68CQ4 756 aaKnown RBP18.1■□□□□ 0.49
ITGAM-207ENST00000569746 KSR2Q6VAB6 950 aa18.1■□□□□ 0.49
ITGAM-207ENST00000569746 FAM89AQ96GI7 184 aa18.1■□□□□ 0.49
ITGAM-207ENST00000569746 TMX4Q9H1E5 349 aaPredicted RBP18.1■□□□□ 0.49
ITGAM-207ENST00000569746 WDR90Q96KV7 1748 aa18.09■□□□□ 0.49
ITGAM-207ENST00000569746 GLTPD2A6NH11 291 aa18.09■□□□□ 0.49
ITGAM-207ENST00000569746 CCDC191Q8NCU4 936 aa18.09■□□□□ 0.49
ITGAM-207ENST00000569746 METTL22Q9BUU2 404 aaPredicted RBP18.09■□□□□ 0.49
ITGAM-207ENST00000569746 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
ITGAM-207ENST00000569746 ZNF277Q9NRM2 450 aaPredicted RBP18.09■□□□□ 0.49
ITGAM-207ENST00000569746 MAP3K2Q9Y2U5 619 aa18.09■□□□□ 0.49
ITGAM-207ENST00000569746 LRRC37AA6NMS7 1700 aa18.09■□□□□ 0.49
ITGAM-207ENST00000569746 ZNF521Q96K83 1311 aa18.08■□□□□ 0.49
ITGAM-207ENST00000569746 BBOX1O75936 387 aa18.08■□□□□ 0.48
ITGAM-207ENST00000569746 NEXNQ0ZGT2 675 aa18.08■□□□□ 0.48
ITGAM-207ENST00000569746 DDX46Q7L014 1031 aaKnown RBP18.08■□□□□ 0.48
ITGAM-207ENST00000569746 SLC51AQ86UW1 340 aa18.08■□□□□ 0.48
ITGAM-207ENST00000569746 C16orf71Q8IYS4 520 aaPredicted RBP18.08■□□□□ 0.48
ITGAM-207ENST00000569746 PI4KAP2A4QPH2 592 aa18.07■□□□□ 0.48
ITGAM-207ENST00000569746 DPY19L2Q6NUT2 758 aa18.07■□□□□ 0.48
ITGAM-207ENST00000569746 G2E3Q7L622 706 aa18.07■□□□□ 0.48
ITGAM-207ENST00000569746 PI4KAP1Q8N8J0 262 aa18.07■□□□□ 0.48
ITGAM-207ENST00000569746 ZBTB38Q8NAP3 1195 aaPredicted RBP18.07■□□□□ 0.48
ITGAM-207ENST00000569746 PSMD1Q99460 953 aa18.07■□□□□ 0.48
ITGAM-207ENST00000569746 RRAGCQ9HB90 399 aa18.07■□□□□ 0.48
ITGAM-207ENST00000569746 CWC25Q9NXE8 425 aaPredicted RBP18.07■□□□□ 0.48
ITGAM-207ENST00000569746 MYH3P11055 1940 aa18.06■□□□□ 0.48
ITGAM-207ENST00000569746 E9PSI1 815 aa18.06■□□□□ 0.48
ITGAM-207ENST00000569746 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
ITGAM-207ENST00000569746 TOMM70O94826 608 aa18.06■□□□□ 0.48
ITGAM-207ENST00000569746 IARSP41252 1262 aaKnown RBP18.06■□□□□ 0.48
ITGAM-207ENST00000569746 FLIIQ13045 1269 aa18.05■□□□□ 0.48
ITGAM-207ENST00000569746 GRAPQ13588 217 aa18.05■□□□□ 0.48
ITGAM-207ENST00000569746 GRAPLQ8TC17 118 aaPredicted RBP18.05■□□□□ 0.48
ITGAM-207ENST00000569746 ATP6V0A2Q9Y487 856 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms