RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 ANKRD36CQ5JPF3 1778 aa14.26□□□□□ -0.13
SHCBP1-207ENST00000569702 NPR1P16066 1061 aa14.25□□□□□ -0.13
SHCBP1-207ENST00000569702 TRIM28Q13263 835 aaKnown RBP14.25□□□□□ -0.13
SHCBP1-207ENST00000569702 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
SHCBP1-207ENST00000569702 STK31Q9BXU1 1019 aa14.25□□□□□ -0.13
SHCBP1-207ENST00000569702 TCERG1O14776 1098 aaKnown RBP14.24□□□□□ -0.13
SHCBP1-207ENST00000569702 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
SHCBP1-207ENST00000569702 RIC3Q7Z5B4 369 aa14.24□□□□□ -0.13
SHCBP1-207ENST00000569702 TNRC6CQ9HCJ0 1690 aaKnown RBP14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 ADCY9O60503 1353 aa14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 E9PSI1 815 aa14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 DDX58O95786 925 aaKnown RBP14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 HOXA10P31260 410 aaPredicted RBP14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 SLFN5Q08AF3 891 aa14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 PRPF40BQ6NWY9 871 aaKnown RBP14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 G2E3Q7L622 706 aa14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 ZNF784Q8NCA9 323 aaPredicted RBP14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 C7orf43Q8WVR3 580 aa14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 ARFGEF2Q9Y6D5 1785 aa14.23□□□□□ -0.13
SHCBP1-207ENST00000569702 SLX4Q8IY92 1834 aa14.22□□□□□ -0.13
SHCBP1-207ENST00000569702 SH3TC1Q8TE82 1336 aa14.22□□□□□ -0.13
SHCBP1-207ENST00000569702 ATP5J2-PTCD1G3V325 749 aa14.22□□□□□ -0.13
SHCBP1-207ENST00000569702 KSR2Q6VAB6 950 aa14.22□□□□□ -0.13
SHCBP1-207ENST00000569702 C3orf67Q6ZVT6 689 aa14.22□□□□□ -0.13
SHCBP1-207ENST00000569702 METTL22Q9BUU2 404 aaPredicted RBP14.22□□□□□ -0.13
SHCBP1-207ENST00000569702 TRMT112Q9UI30 125 aaKnown RBP14.22□□□□□ -0.13
SHCBP1-207ENST00000569702 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.13
SHCBP1-207ENST00000569702 C21orf2O43822 256 aa14.21□□□□□ -0.13
SHCBP1-207ENST00000569702 ALDH1B1P30837 517 aa14.21□□□□□ -0.13
SHCBP1-207ENST00000569702 TRMT2AQ8IZ69 625 aaKnown RBP14.21□□□□□ -0.13
SHCBP1-207ENST00000569702 SYNE4Q8N205 404 aa14.21□□□□□ -0.13
SHCBP1-207ENST00000569702 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.13
SHCBP1-207ENST00000569702 NLRP3Q96P20 1036 aa14.21□□□□□ -0.13
SHCBP1-207ENST00000569702 MAP3K2Q9Y2U5 619 aa14.21□□□□□ -0.13
SHCBP1-207ENST00000569702 CACNA1FO60840 1977 aa14.21□□□□□ -0.13
SHCBP1-207ENST00000569702 NFKBIEO00221 500 aa14.2□□□□□ -0.14
SHCBP1-207ENST00000569702 FLIIQ13045 1269 aa14.2□□□□□ -0.14
SHCBP1-207ENST00000569702 CCDC191Q8NCU4 936 aa14.2□□□□□ -0.14
SHCBP1-207ENST00000569702 CDCA7LQ96GN5 454 aa14.2□□□□□ -0.14
SHCBP1-207ENST00000569702 MYD88Q99836 296 aa14.2□□□□□ -0.14
SHCBP1-207ENST00000569702 HCLS1P14317 486 aaPredicted RBP14.19□□□□□ -0.14
SHCBP1-207ENST00000569702 PRELPP51888 382 aa14.19□□□□□ -0.14
SHCBP1-207ENST00000569702 SOGA3Q5TF21 947 aa14.19□□□□□ -0.14
SHCBP1-207ENST00000569702 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
SHCBP1-207ENST00000569702 RPGRQ92834 1020 aaKnown RBP14.19□□□□□ -0.14
SHCBP1-207ENST00000569702 FAM89AQ96GI7 184 aa14.19□□□□□ -0.14
SHCBP1-207ENST00000569702 CRAMP1Q96RY5 1269 aa14.19□□□□□ -0.14
SHCBP1-207ENST00000569702 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
SHCBP1-207ENST00000569702 IGKV5-2P06315 115 aa14.18□□□□□ -0.14
SHCBP1-207ENST00000569702 RASSF7Q02833 373 aa14.18□□□□□ -0.14
SHCBP1-207ENST00000569702 ZBTB38Q8NAP3 1195 aaPredicted RBP14.18□□□□□ -0.14
SHCBP1-207ENST00000569702 ZNF428Q96B54 188 aa14.18□□□□□ -0.14
SHCBP1-207ENST00000569702 SBF1O95248 1867 aa14.18□□□□□ -0.14
SHCBP1-207ENST00000569702 LTBP3Q9NS15 1303 aa14.17□□□□□ -0.14
SHCBP1-207ENST00000569702 CACNA1SQ13698 1873 aa14.17□□□□□ -0.14
SHCBP1-207ENST00000569702 FER1L6Q2WGJ9 1857 aa14.17□□□□□ -0.14
SHCBP1-207ENST00000569702 LMNB1P20700 586 aa14.17□□□□□ -0.14
SHCBP1-207ENST00000569702 RBM17Q96I25 401 aaKnown RBP14.17□□□□□ -0.14
SHCBP1-207ENST00000569702 CWC25Q9NXE8 425 aaPredicted RBP14.17□□□□□ -0.14
SHCBP1-207ENST00000569702 PCCAP05165 728 aaPredicted RBP14.16□□□□□ -0.14
SHCBP1-207ENST00000569702 FKBP5Q13451 457 aaPredicted RBP14.16□□□□□ -0.14
SHCBP1-207ENST00000569702 SF3B3Q15393 1217 aaKnown RBP14.16□□□□□ -0.14
SHCBP1-207ENST00000569702 CCDC93Q567U6 631 aa14.16□□□□□ -0.14
SHCBP1-207ENST00000569702 RNF181Q9P0P0 153 aa14.16□□□□□ -0.14
SHCBP1-207ENST00000569702 SNED1Q8TER0 1413 aa14.15□□□□□ -0.14
SHCBP1-207ENST00000569702 DDX60Q8IY21 1712 aaKnown RBP14.15□□□□□ -0.14
SHCBP1-207ENST00000569702 LAMB2P55268 1798 aa14.15□□□□□ -0.14
SHCBP1-207ENST00000569702 NEURL1BA8MQ27 555 aa14.15□□□□□ -0.14
SHCBP1-207ENST00000569702 IRS4O14654 1257 aaPredicted RBP14.15□□□□□ -0.14
SHCBP1-207ENST00000569702 NEXNQ0ZGT2 675 aa14.15□□□□□ -0.14
SHCBP1-207ENST00000569702 RTL5Q5HYW3 569 aaPredicted RBP14.15□□□□□ -0.14
SHCBP1-207ENST00000569702 OLFM4Q6UX06 510 aa14.15□□□□□ -0.14
SHCBP1-207ENST00000569702 DNAAF4Q8WXU2 420 aa14.15□□□□□ -0.14
SHCBP1-207ENST00000569702 TAOK3Q9H2K8 898 aa14.15□□□□□ -0.14
SHCBP1-207ENST00000569702 ABCC4O15439 1325 aa14.15□□□□□ -0.15
SHCBP1-207ENST00000569702 CWF19L2Q2TBE0 894 aaKnown RBP14.14□□□□□ -0.15
SHCBP1-207ENST00000569702 CC2D2BQ6DHV5 1058 aa14.14□□□□□ -0.15
SHCBP1-207ENST00000569702 RTKN2Q8IZC4 609 aa14.14□□□□□ -0.15
SHCBP1-207ENST00000569702 ZC3H4Q9UPT8 1303 aaKnown RBP14.14□□□□□ -0.15
SHCBP1-207ENST00000569702 PPEF1O14829 653 aaPredicted RBP14.13□□□□□ -0.15
SHCBP1-207ENST00000569702 BBOX1O75936 387 aa14.13□□□□□ -0.15
SHCBP1-207ENST00000569702 HSP90B1P14625 803 aaKnown RBP14.13□□□□□ -0.15
SHCBP1-207ENST00000569702 DDX46Q7L014 1031 aaKnown RBP14.13□□□□□ -0.15
SHCBP1-207ENST00000569702 MRPL50Q8N5N7 158 aaKnown RBP14.13□□□□□ -0.15
SHCBP1-207ENST00000569702 LINS1Q8NG48 757 aa14.13□□□□□ -0.15
SHCBP1-207ENST00000569702 CDHR2Q9BYE9 1310 aa14.13□□□□□ -0.15
SHCBP1-207ENST00000569702 F6X3S4 739 aa14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 H7C1W4 665 aa14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 PDE8AO60658 829 aa14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 CT47B1P0C2W7 299 aaPredicted RBP14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 FKBP4Q02790 459 aaKnown RBP eCLIP14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 GRAPQ13588 217 aa14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 GCKRQ14397 625 aa14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 GRIPAP1Q4V328 841 aa14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 GRAPLQ8TC17 118 aaPredicted RBP14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 SSH1Q8WYL5 1049 aa14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 JARID2Q92833 1246 aaPredicted RBP14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 ATP6V0A2Q9Y487 856 aa14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 CCDC88AQ3V6T2 1871 aa14.12□□□□□ -0.15
SHCBP1-207ENST00000569702 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms