RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 C3orf67Q6ZVT6 689 aa24.16■■□□□ 1.46
MSLN-208ENST00000569566 HTRA3P83110 453 aa24.15■■□□□ 1.46
MSLN-208ENST00000569566 DNAJC5GQ8N7S2 189 aa24.15■■□□□ 1.46
MSLN-208ENST00000569566 SMC1BQ8NDV3 1235 aa24.15■■□□□ 1.46
MSLN-208ENST00000569566 NECTIN2Q92692 538 aa24.15■■□□□ 1.46
MSLN-208ENST00000569566 MYH3P11055 1940 aa24.15■■□□□ 1.46
MSLN-208ENST00000569566 ZNF541Q9H0D2 1346 aa24.14■■□□□ 1.46
MSLN-208ENST00000569566 GTF2E1P29083 439 aaPredicted RBP24.14■■□□□ 1.45
MSLN-208ENST00000569566 PCNTO95613 3336 aa24.13■■□□□ 1.45
MSLN-208ENST00000569566 PARP10Q53GL7 1025 aa24.13■■□□□ 1.45
MSLN-208ENST00000569566 ZNF277Q9NRM2 450 aaPredicted RBP24.13■■□□□ 1.45
MSLN-208ENST00000569566 HOXA10P31260 410 aaPredicted RBP24.12■■□□□ 1.45
MSLN-208ENST00000569566 XAGE3Q8WTP9 111 aa24.12■■□□□ 1.45
MSLN-208ENST00000569566 DDX21Q9NR30 783 aaKnown RBP eCLIP24.12■■□□□ 1.45
MSLN-208ENST00000569566 CHPF2Q9P2E5 772 aa24.12■■□□□ 1.45
MSLN-208ENST00000569566 SPEF2Q9C093 1822 aa24.12■■□□□ 1.45
MSLN-208ENST00000569566 DDNO94850 711 aaPredicted RBP24.11■■□□□ 1.45
MSLN-208ENST00000569566 RNF123Q5XPI4 1314 aa24.1■■□□□ 1.45
MSLN-208ENST00000569566 ALDH1B1P30837 517 aa24.1■■□□□ 1.45
MSLN-208ENST00000569566 DPY19L2Q6NUT2 758 aa24.1■■□□□ 1.45
MSLN-208ENST00000569566 COPS6Q7L5N1 327 aa24.1■■□□□ 1.45
MSLN-208ENST00000569566 LAS1LQ9Y4W2 734 aaKnown RBP24.1■■□□□ 1.45
MSLN-208ENST00000569566 CACNA1FO60840 1977 aa24.1■■□□□ 1.45
MSLN-208ENST00000569566 HOXB7P09629 217 aa24.09■■□□□ 1.45
MSLN-208ENST00000569566 RPGRQ92834 1020 aaKnown RBP24.09■■□□□ 1.45
MSLN-208ENST00000569566 L3MBTL3Q96JM7 780 aaPredicted RBP24.09■■□□□ 1.45
MSLN-208ENST00000569566 ZNF853P0CG23 659 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 POTEIP0CG38 1075 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 POTEJP0CG39 1038 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 HDGFL1Q5TGJ6 251 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 PPP1R42Q7Z4L9 355 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 NLRP10Q86W26 655 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 RTKN2Q8IZC4 609 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 CFAP44Q96MT7 982 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 PSMD1Q99460 953 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 MBIPQ9NS73 344 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 TRPM7Q96QT4 1865 aa24.08■■□□□ 1.45
MSLN-208ENST00000569566 IARSP41252 1262 aaKnown RBP24.07■■□□□ 1.44
MSLN-208ENST00000569566 AIMP1Q12904 312 aaKnown RBP24.07■■□□□ 1.44
MSLN-208ENST00000569566 CRAMP1Q96RY5 1269 aa24.07■■□□□ 1.44
MSLN-208ENST00000569566 PSME4Q14997 1843 aa24.06■■□□□ 1.44
MSLN-208ENST00000569566 APAF1O14727 1248 aa24.06■■□□□ 1.44
MSLN-208ENST00000569566 CCDC184Q52MB2 194 aa24.06■■□□□ 1.44
MSLN-208ENST00000569566 ABCC4O15439 1325 aa24.06■■□□□ 1.44
MSLN-208ENST00000569566 PPEF1O14829 653 aaPredicted RBP24.05■■□□□ 1.44
MSLN-208ENST00000569566 UTP14AQ9BVJ6 771 aaKnown RBP24.05■■□□□ 1.44
MSLN-208ENST00000569566 HSP90AB3PQ58FF7 597 aa24.04■■□□□ 1.44
MSLN-208ENST00000569566 SLC10A5Q5PT55 438 aa24.04■■□□□ 1.44
MSLN-208ENST00000569566 SYNE4Q8N205 404 aa24.04■■□□□ 1.44
MSLN-208ENST00000569566 KLRG1Q96E93 195 aa24.04■■□□□ 1.44
MSLN-208ENST00000569566 FZD9O00144 591 aa24.03■■□□□ 1.44
MSLN-208ENST00000569566 TCIRG1Q13488 830 aa24.03■■□□□ 1.44
MSLN-208ENST00000569566 DUSP27Q5VZP5 1158 aa24.03■■□□□ 1.44
MSLN-208ENST00000569566 CC2D2BQ6DHV5 1058 aa24.03■■□□□ 1.44
MSLN-208ENST00000569566 RBM17Q96I25 401 aaKnown RBP24.02■■□□□ 1.44
MSLN-208ENST00000569566 IFT57Q9NWB7 429 aa24.02■■□□□ 1.44
MSLN-208ENST00000569566 JMYQ8N9B5 988 aa24.01■■□□□ 1.43
MSLN-208ENST00000569566 PLBD2Q8NHP8 589 aa24.01■■□□□ 1.43
MSLN-208ENST00000569566 TAF1DQ9H5J8 278 aaPredicted RBP24.01■■□□□ 1.43
MSLN-208ENST00000569566 DBF4Q9UBU7 674 aaPredicted RBP24.01■■□□□ 1.43
MSLN-208ENST00000569566 SCN9AQ15858 1988 aa24.01■■□□□ 1.43
MSLN-208ENST00000569566 HCLS1P14317 486 aaPredicted RBP24■■□□□ 1.43
MSLN-208ENST00000569566 NLRP3Q96P20 1036 aa24■■□□□ 1.43
MSLN-208ENST00000569566 SH3TC1Q8TE82 1336 aa24■■□□□ 1.43
MSLN-208ENST00000569566 ZNF646O15015 1829 aaPredicted RBP24■■□□□ 1.43
MSLN-208ENST00000569566 IQCA1LA6NCM1 817 aa23.99■■□□□ 1.43
MSLN-208ENST00000569566 ISCA1Q9BUE6 129 aa23.99■■□□□ 1.43
MSLN-208ENST00000569566 THSD7BQ9C0I4 1608 aa23.99■■□□□ 1.43
MSLN-208ENST00000569566 A0A1B0GUL6 1792 aa23.98■■□□□ 1.43
MSLN-208ENST00000569566 CHADLQ6NUI6 762 aa23.98■■□□□ 1.43
MSLN-208ENST00000569566 ZNF428Q96B54 188 aa23.98■■□□□ 1.43
MSLN-208ENST00000569566 TCERG1O14776 1098 aaKnown RBP23.97■■□□□ 1.43
MSLN-208ENST00000569566 TRMT112Q9UI30 125 aaKnown RBP23.97■■□□□ 1.43
MSLN-208ENST00000569566 ATP6V0A2Q9Y487 856 aa23.97■■□□□ 1.43
MSLN-208ENST00000569566 PASKQ96RG2 1323 aa23.96■■□□□ 1.43
MSLN-208ENST00000569566 GNAI1P63096 354 aa23.96■■□□□ 1.43
MSLN-208ENST00000569566 LDHDQ86WU2 507 aa23.96■■□□□ 1.43
MSLN-208ENST00000569566 HYPKQ9NX55 129 aa23.96■■□□□ 1.43
MSLN-208ENST00000569566 GRIPAP1Q4V328 841 aa23.95■■□□□ 1.42
MSLN-208ENST00000569566 ANKRD13DQ6ZTN6 518 aa23.95■■□□□ 1.42
MSLN-208ENST00000569566 GPC2Q8N158 579 aa23.95■■□□□ 1.42
MSLN-208ENST00000569566 HACL1Q9UJ83 578 aa23.94■■□□□ 1.42
MSLN-208ENST00000569566 ATP5J2-PTCD1G3V325 749 aa23.93■■□□□ 1.42
MSLN-208ENST00000569566 EPHX2P34913 555 aa23.93■■□□□ 1.42
MSLN-208ENST00000569566 CALD1Q05682 793 aaKnown RBP23.93■■□□□ 1.42
MSLN-208ENST00000569566 AOC3Q16853 763 aa23.93■■□□□ 1.42
MSLN-208ENST00000569566 LARGE2Q8N3Y3 721 aa23.93■■□□□ 1.42
MSLN-208ENST00000569566 C8orf58Q8NAV2 365 aa23.93■■□□□ 1.42
MSLN-208ENST00000569566 JDP2Q8WYK2 163 aa23.93■■□□□ 1.42
MSLN-208ENST00000569566 RTFDC1Q9BY42 306 aaPredicted RBP23.93■■□□□ 1.42
MSLN-208ENST00000569566 PHAXQ9H814 394 aaKnown RBP23.93■■□□□ 1.42
MSLN-208ENST00000569566 SCNN1DP51172 638 aa23.92■■□□□ 1.42
MSLN-208ENST00000569566 GRAPQ13588 217 aa23.92■■□□□ 1.42
MSLN-208ENST00000569566 GRAPLQ8TC17 118 aaPredicted RBP23.92■■□□□ 1.42
MSLN-208ENST00000569566 ELL2O00472 640 aaPredicted RBP23.91■■□□□ 1.42
MSLN-208ENST00000569566 PPIP5K2O43314 1243 aa23.91■■□□□ 1.42
MSLN-208ENST00000569566 FAM89AQ96GI7 184 aa23.91■■□□□ 1.42
MSLN-208ENST00000569566 EAPPQ56P03 285 aaPredicted RBP23.9■■□□□ 1.42
MSLN-208ENST00000569566 TSPYL6Q8N831 410 aa23.9■■□□□ 1.42
MSLN-208ENST00000569566 EIF6P56537 245 aaKnown RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms