RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 CCDC87Q9NVE4 849 aa9.5□□□□□ -0.89
CDH13-214ENST00000569455 TFCP2L1Q9NZI6 479 aa9.5□□□□□ -0.89
CDH13-214ENST00000569455 UBR3Q6ZT12 1888 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 RPS6KA4O75676 772 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 CAPN15O75808 1086 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 SLC34A2O95436 690 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 IGKV5-2P06315 115 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 ITPK1Q13572 414 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 ANKRD45Q5TZF3 282 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 CHD1LQ86WJ1 897 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 LINC00116Q8NCU8 138 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 ZBTB3Q9H5J0 574 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 ZBTB1Q9Y2K1 713 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 MYH14Q7Z406 1995 aaKnown RBP9.49□□□□□ -0.89
CDH13-214ENST00000569455 MAP3K15Q6ZN16 1313 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 NUP98P52948 1817 aa9.49□□□□□ -0.89
CDH13-214ENST00000569455 A0A087WZG4 1122 aa9.48□□□□□ -0.89
CDH13-214ENST00000569455 ERVV-1B6SEH8 477 aa9.48□□□□□ -0.89
CDH13-214ENST00000569455 RGL2O15211 777 aa9.48□□□□□ -0.89
CDH13-214ENST00000569455 CRKLP46109 303 aaKnown RBP9.48□□□□□ -0.89
CDH13-214ENST00000569455 MTX1Q13505 466 aa9.48□□□□□ -0.89
CDH13-214ENST00000569455 CCDC191Q8NCU4 936 aa9.48□□□□□ -0.89
CDH13-214ENST00000569455 SSH3Q8TE77 659 aa9.48□□□□□ -0.89
CDH13-214ENST00000569455 GPBP1L1Q9HC44 474 aaPredicted RBP9.48□□□□□ -0.89
CDH13-214ENST00000569455 CWC25Q9NXE8 425 aaPredicted RBP9.48□□□□□ -0.89
CDH13-214ENST00000569455 RTCBQ9Y3I0 505 aaKnown RBP9.48□□□□□ -0.89
CDH13-214ENST00000569455 COL15A1P39059 1388 aa9.48□□□□□ -0.89
CDH13-214ENST00000569455 ATP5J2-PTCD1G3V325 749 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 SRGAP3O43295 1099 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 PRELPP51888 382 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 EIF5P55010 431 aaKnown RBP9.47□□□□□ -0.89
CDH13-214ENST00000569455 TRIM28Q13263 835 aaKnown RBP9.47□□□□□ -0.89
CDH13-214ENST00000569455 TCIRG1Q13488 830 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 POLA2Q14181 598 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 HSP90AB4PQ58FF6 505 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 TRAPPC3LQ5T215 181 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 INTS5Q6P9B9 1019 aaKnown RBP9.47□□□□□ -0.89
CDH13-214ENST00000569455 GIGYF2Q6Y7W6 1299 aaKnown RBP9.47□□□□□ -0.89
CDH13-214ENST00000569455 PPP1R42Q7Z4L9 355 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 SKAP1Q86WV1 359 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 DZIP3Q86Y13 1208 aaKnown RBP9.47□□□□□ -0.89
CDH13-214ENST00000569455 LNPKQ9C0E8 428 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 TSHZ2Q9NRE2 1034 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 TUBGCP6Q96RT7 1819 aa9.47□□□□□ -0.89
CDH13-214ENST00000569455 PNMA6EA0A0J9YXQ4 647 aa9.46□□□□□ -0.9
CDH13-214ENST00000569455 GNPATO15228 680 aa9.46□□□□□ -0.9
CDH13-214ENST00000569455 GRIN3BO60391 1043 aa9.46□□□□□ -0.9
CDH13-214ENST00000569455 RAB11FIP3O75154 756 aa9.46□□□□□ -0.9
CDH13-214ENST00000569455 ZNF827Q17R98 1081 aa9.46□□□□□ -0.9
CDH13-214ENST00000569455 UBE3BQ7Z3V4 1068 aa9.46□□□□□ -0.9
CDH13-214ENST00000569455 ISCA1Q9BUE6 129 aa9.46□□□□□ -0.9
CDH13-214ENST00000569455 PNPLA7Q6ZV29 1317 aa9.46□□□□□ -0.9
CDH13-214ENST00000569455 COL24A1Q17RW2 1714 aa9.45□□□□□ -0.9
CDH13-214ENST00000569455 BCORQ6W2J9 1755 aa9.45□□□□□ -0.9
CDH13-214ENST00000569455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.45□□□□□ -0.9
CDH13-214ENST00000569455 H7C1W4 665 aa9.45□□□□□ -0.9
CDH13-214ENST00000569455 SURF6O75683 361 aaKnown RBP9.45□□□□□ -0.9
CDH13-214ENST00000569455 PDE4AP27815 886 aa9.45□□□□□ -0.9
CDH13-214ENST00000569455 KCNQ4P56696 695 aa9.45□□□□□ -0.9
CDH13-214ENST00000569455 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
CDH13-214ENST00000569455 KLHL34Q8N239 644 aa9.45□□□□□ -0.9
CDH13-214ENST00000569455 SUCLG2Q96I99 432 aa9.45□□□□□ -0.9
CDH13-214ENST00000569455 LRRCC1Q9C099 1032 aa9.45□□□□□ -0.9
CDH13-214ENST00000569455 BICC1Q9H694 974 aaKnown RBP9.45□□□□□ -0.9
CDH13-214ENST00000569455 ZNF652Q9Y2D9 606 aa9.45□□□□□ -0.9
CDH13-214ENST00000569455 RFC4P35249 363 aa9.44□□□□□ -0.9
CDH13-214ENST00000569455 APLP1P51693 650 aa9.44□□□□□ -0.9
CDH13-214ENST00000569455 OS9Q13438 667 aaPredicted RBP9.44□□□□□ -0.9
CDH13-214ENST00000569455 COL13A1Q5TAT6 717 aaPredicted RBP9.44□□□□□ -0.9
CDH13-214ENST00000569455 COL23A1Q86Y22 540 aaPredicted RBP9.44□□□□□ -0.9
CDH13-214ENST00000569455 ERC1Q8IUD2 1116 aa9.44□□□□□ -0.9
CDH13-214ENST00000569455 TBC1D2BQ9UPU7 963 aa9.44□□□□□ -0.9
CDH13-214ENST00000569455 EXOC6BQ9Y2D4 811 aa9.44□□□□□ -0.9
CDH13-214ENST00000569455 MYH3P11055 1940 aa9.44□□□□□ -0.9
CDH13-214ENST00000569455 CDHR2Q9BYE9 1310 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 APBB1O00213 710 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 PCCAP05165 728 aaPredicted RBP9.43□□□□□ -0.9
CDH13-214ENST00000569455 CASP7P55210 303 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 HLFQ16534 295 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 RABL6Q3YEC7 729 aaPredicted RBP9.43□□□□□ -0.9
CDH13-214ENST00000569455 PARP10Q53GL7 1025 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 TNS4Q8IZW8 715 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 NLGN1Q8N2Q7 840 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 ARHGEF1Q92888 912 aaKnown RBP9.43□□□□□ -0.9
CDH13-214ENST00000569455 KIF1BPQ96EK5 621 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 KAZALD1Q96I82 304 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 BACH2Q9BYV9 841 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 NARFQ9UHQ1 456 aa9.43□□□□□ -0.9
CDH13-214ENST00000569455 NOP58Q9Y2X3 529 aaKnown RBP9.43□□□□□ -0.9
CDH13-214ENST00000569455 SCN7AQ01118 1682 aa9.42□□□□□ -0.9
CDH13-214ENST00000569455 ZPR1O75312 459 aa9.42□□□□□ -0.9
CDH13-214ENST00000569455 HSP90B1P14625 803 aaKnown RBP9.42□□□□□ -0.9
CDH13-214ENST00000569455 G3BP1Q13283 466 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDH13-214ENST00000569455 CLEC4GQ6UXB4 293 aa9.42□□□□□ -0.9
CDH13-214ENST00000569455 NLRP10Q86W26 655 aa9.42□□□□□ -0.9
CDH13-214ENST00000569455 ZNF34Q8IZ26 560 aa9.42□□□□□ -0.9
CDH13-214ENST00000569455 ZBTB38Q8NAP3 1195 aaPredicted RBP9.42□□□□□ -0.9
CDH13-214ENST00000569455 C4AP0C0L4 1744 aa9.42□□□□□ -0.9
CDH13-214ENST00000569455 USP42Q9H9J4 1324 aaKnown RBP9.41□□□□□ -0.9
CDH13-214ENST00000569455 CAMTA2O94983 1202 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms