RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
UBR1-210ENST00000569337 UTP14AQ9BVJ6 771 aaKnown RBP12.06□□□□□ -0.48
UBR1-210ENST00000569337 VAMP4O75379 141 aa12.05□□□□□ -0.48
UBR1-210ENST00000569337 NTSR2O95665 410 aa12.05□□□□□ -0.48
UBR1-210ENST00000569337 LMNB1P20700 586 aa12.05□□□□□ -0.48
UBR1-210ENST00000569337 SOGA3Q5TF21 947 aa12.05□□□□□ -0.48
UBR1-210ENST00000569337 CCDC30Q5VVM6 783 aa12.05□□□□□ -0.48
UBR1-210ENST00000569337 CACNA1FO60840 1977 aa12.05□□□□□ -0.48
UBR1-210ENST00000569337 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
UBR1-210ENST00000569337 NFKBIEO00221 500 aa12.04□□□□□ -0.48
UBR1-210ENST00000569337 TWISTNBQ3B726 338 aaPredicted RBP12.04□□□□□ -0.48
UBR1-210ENST00000569337 NLRP10Q86W26 655 aa12.04□□□□□ -0.48
UBR1-210ENST00000569337 RPGRQ92834 1020 aaKnown RBP12.04□□□□□ -0.48
UBR1-210ENST00000569337 NLRP3Q96P20 1036 aa12.04□□□□□ -0.48
UBR1-210ENST00000569337 TRMT112Q9UI30 125 aaKnown RBP12.04□□□□□ -0.48
UBR1-210ENST00000569337 ABCC12Q96J65 1359 aa12.04□□□□□ -0.48
UBR1-210ENST00000569337 C1QTNF8P60827 252 aa12.03□□□□□ -0.48
UBR1-210ENST00000569337 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
UBR1-210ENST00000569337 RIC3Q7Z5B4 369 aa12.03□□□□□ -0.48
UBR1-210ENST00000569337 PHAXQ9H814 394 aaKnown RBP12.03□□□□□ -0.48
UBR1-210ENST00000569337 RNF123Q5XPI4 1314 aa12.03□□□□□ -0.48
UBR1-210ENST00000569337 BRCA1P38398 1863 aaKnown RBP12.02□□□□□ -0.48
UBR1-210ENST00000569337 ATP5J2-PTCD1G3V325 749 aa12.02□□□□□ -0.49
UBR1-210ENST00000569337 TCERG1O14776 1098 aaKnown RBP12.02□□□□□ -0.49
UBR1-210ENST00000569337 CCDC93Q567U6 631 aa12.02□□□□□ -0.49
UBR1-210ENST00000569337 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.49
UBR1-210ENST00000569337 C7orf43Q8WVR3 580 aa12.02□□□□□ -0.49
UBR1-210ENST00000569337 RBM17Q96I25 401 aaKnown RBP12.02□□□□□ -0.49
UBR1-210ENST00000569337 STK31Q9BXU1 1019 aa12.02□□□□□ -0.49
UBR1-210ENST00000569337 TAOK3Q9H2K8 898 aa12.02□□□□□ -0.49
UBR1-210ENST00000569337 DDX58O95786 925 aaKnown RBP12.01□□□□□ -0.49
UBR1-210ENST00000569337 HOXA10P31260 410 aaPredicted RBP12.01□□□□□ -0.49
UBR1-210ENST00000569337 PRELPP51888 382 aa12.01□□□□□ -0.49
UBR1-210ENST00000569337 ARFGEF1Q9Y6D6 1849 aa12.01□□□□□ -0.49
UBR1-210ENST00000569337 KDM2BQ8NHM5 1336 aa12.01□□□□□ -0.49
UBR1-210ENST00000569337 SH3TC1Q8TE82 1336 aa12.01□□□□□ -0.49
UBR1-210ENST00000569337 ANKRD31Q8N7Z5 1873 aa12.01□□□□□ -0.49
UBR1-210ENST00000569337 RIC1Q4ADV7 1423 aa12.01□□□□□ -0.49
UBR1-210ENST00000569337 HCLS1P14317 486 aaPredicted RBP12□□□□□ -0.49
UBR1-210ENST00000569337 TRIM28Q13263 835 aaKnown RBP12□□□□□ -0.49
UBR1-210ENST00000569337 C3orf67Q6ZVT6 689 aa12□□□□□ -0.49
UBR1-210ENST00000569337 RTKN2Q8IZC4 609 aa12□□□□□ -0.49
UBR1-210ENST00000569337 SYNE4Q8N205 404 aa12□□□□□ -0.49
UBR1-210ENST00000569337 SSH1Q8WYL5 1049 aa12□□□□□ -0.49
UBR1-210ENST00000569337 ZNF428Q96B54 188 aa12□□□□□ -0.49
UBR1-210ENST00000569337 CRAMP1Q96RY5 1269 aa12□□□□□ -0.49
UBR1-210ENST00000569337 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
UBR1-210ENST00000569337 LTBP3Q9NS15 1303 aa12□□□□□ -0.49
UBR1-210ENST00000569337 ZC3H4Q9UPT8 1303 aaKnown RBP12□□□□□ -0.49
UBR1-210ENST00000569337 KIF3CO14782 793 aa11.99□□□□□ -0.49
UBR1-210ENST00000569337 SLC4A2P04920 1241 aa11.99□□□□□ -0.49
UBR1-210ENST00000569337 CT47B1P0C2W7 299 aaPredicted RBP11.99□□□□□ -0.49
UBR1-210ENST00000569337 RARSP54136 660 aaKnown RBP11.99□□□□□ -0.49
UBR1-210ENST00000569337 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
UBR1-210ENST00000569337 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
UBR1-210ENST00000569337 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
UBR1-210ENST00000569337 OLFM4Q6UX06 510 aa11.99□□□□□ -0.49
UBR1-210ENST00000569337 FAM89AQ96GI7 184 aa11.99□□□□□ -0.49
UBR1-210ENST00000569337 MYD88Q99836 296 aa11.99□□□□□ -0.49
UBR1-210ENST00000569337 BCL2L13Q9BXK5 485 aa11.99□□□□□ -0.49
UBR1-210ENST00000569337 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
UBR1-210ENST00000569337 NMRK2Q9NPI5 230 aa11.99□□□□□ -0.49
UBR1-210ENST00000569337 NUP98P52948 1817 aa11.98□□□□□ -0.49
UBR1-210ENST00000569337 DLEC1Q9Y238 1755 aa11.98□□□□□ -0.49
UBR1-210ENST00000569337 GLTPD2A6NH11 291 aa11.98□□□□□ -0.49
UBR1-210ENST00000569337 BCAR3O75815 825 aa11.98□□□□□ -0.49
UBR1-210ENST00000569337 RTL5Q5HYW3 569 aaPredicted RBP11.98□□□□□ -0.49
UBR1-210ENST00000569337 DDX46Q7L014 1031 aaKnown RBP11.98□□□□□ -0.49
UBR1-210ENST00000569337 C16orf71Q8IYS4 520 aaPredicted RBP11.98□□□□□ -0.49
UBR1-210ENST00000569337 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
UBR1-210ENST00000569337 COL11A2P13942 1736 aaPredicted RBP11.97□□□□□ -0.49
UBR1-210ENST00000569337 PI4KAP2A4QPH2 592 aa11.97□□□□□ -0.49
UBR1-210ENST00000569337 PPEF1O14829 653 aaPredicted RBP11.97□□□□□ -0.49
UBR1-210ENST00000569337 GRIPAP1Q4V328 841 aa11.97□□□□□ -0.49
UBR1-210ENST00000569337 KSR2Q6VAB6 950 aa11.97□□□□□ -0.49
UBR1-210ENST00000569337 G2E3Q7L622 706 aa11.97□□□□□ -0.49
UBR1-210ENST00000569337 MRPL50Q8N5N7 158 aaKnown RBP11.97□□□□□ -0.49
UBR1-210ENST00000569337 PI4KAP1Q8N8J0 262 aa11.97□□□□□ -0.49
UBR1-210ENST00000569337 CCDC191Q8NCU4 936 aa11.97□□□□□ -0.49
UBR1-210ENST00000569337 METTL22Q9BUU2 404 aaPredicted RBP11.97□□□□□ -0.49
UBR1-210ENST00000569337 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
UBR1-210ENST00000569337 RCAN3Q9UKA8 241 aa11.97□□□□□ -0.49
UBR1-210ENST00000569337 MAP3K2Q9Y2U5 619 aa11.97□□□□□ -0.49
UBR1-210ENST00000569337 IRS4O14654 1257 aaPredicted RBP11.96□□□□□ -0.49
UBR1-210ENST00000569337 BBOX1O75936 387 aa11.96□□□□□ -0.49
UBR1-210ENST00000569337 TOMM70O94826 608 aa11.96□□□□□ -0.49
UBR1-210ENST00000569337 HSP90B1P14625 803 aaKnown RBP11.96□□□□□ -0.49
UBR1-210ENST00000569337 NEXNQ0ZGT2 675 aa11.96□□□□□ -0.49
UBR1-210ENST00000569337 ALDH1L2Q3SY69 923 aa11.96□□□□□ -0.49
UBR1-210ENST00000569337 ZBTB38Q8NAP3 1195 aaPredicted RBP11.96□□□□□ -0.49
UBR1-210ENST00000569337 CWC25Q9NXE8 425 aaPredicted RBP11.96□□□□□ -0.49
UBR1-210ENST00000569337 SLX4Q8IY92 1834 aa11.95□□□□□ -0.5
UBR1-210ENST00000569337 ABCC4O15439 1325 aa11.95□□□□□ -0.5
UBR1-210ENST00000569337 PSMD1Q99460 953 aa11.95□□□□□ -0.5
UBR1-210ENST00000569337 ATP6V0A2Q9Y487 856 aa11.95□□□□□ -0.5
UBR1-210ENST00000569337 TNRC6CQ9HCJ0 1690 aaKnown RBP11.94□□□□□ -0.5
UBR1-210ENST00000569337 PCCAP05165 728 aaPredicted RBP11.94□□□□□ -0.5
UBR1-210ENST00000569337 VEGFAP15692 232 aaPredicted RBP11.94□□□□□ -0.5
UBR1-210ENST00000569337 IARSP41252 1262 aaKnown RBP11.94□□□□□ -0.5
UBR1-210ENST00000569337 FLIIQ13045 1269 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms