RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 IGF2-ASQ6U949 168 aa8.15□□□□□ -1.1
UBR1-209ENST00000569243 DTWD1Q8N5C7 304 aa8.15□□□□□ -1.1
UBR1-209ENST00000569243 SCHIP1Q9P0W5 487 aaPredicted RBP8.15□□□□□ -1.1
UBR1-209ENST00000569243 GPC6Q9Y625 555 aaPredicted RBP8.15□□□□□ -1.1
UBR1-209ENST00000569243 SFI1A8K8P3 1242 aa8.14□□□□□ -1.11
UBR1-209ENST00000569243 DZIP1LQ8IYY4 767 aaKnown RBP8.14□□□□□ -1.11
UBR1-209ENST00000569243 HSH2DQ96JZ2 352 aa8.14□□□□□ -1.11
UBR1-209ENST00000569243 SNRKQ9NRH2 765 aa8.14□□□□□ -1.11
UBR1-209ENST00000569243 DNAJB12Q9NXW2 375 aaKnown RBP8.14□□□□□ -1.11
UBR1-209ENST00000569243 PTCD1O75127 700 aaKnown RBP8.13□□□□□ -1.11
UBR1-209ENST00000569243 TBCELQ5QJ74 424 aa8.13□□□□□ -1.11
UBR1-209ENST00000569243 SH3PXD2AQ5TCZ1 1133 aa8.13□□□□□ -1.11
UBR1-209ENST00000569243 BACH1O14867 736 aa8.12□□□□□ -1.11
UBR1-209ENST00000569243 ALX3O95076 343 aa8.12□□□□□ -1.11
UBR1-209ENST00000569243 PLPP7Q8NBV4 271 aa8.12□□□□□ -1.11
UBR1-209ENST00000569243 TYRO3Q06418 890 aa8.11□□□□□ -1.11
UBR1-209ENST00000569243 MAP7D1Q3KQU3 841 aa8.11□□□□□ -1.11
UBR1-209ENST00000569243 AKTIPQ9H8T0 292 aa8.11□□□□□ -1.11
UBR1-209ENST00000569243 SLC9A9Q8IVB4 645 aa8.1□□□□□ -1.11
UBR1-209ENST00000569243 KRTAP4-11Q9BYQ6 195 aa8.1□□□□□ -1.11
UBR1-209ENST00000569243 SERTM1A2A2V5 107 aa8.09□□□□□ -1.11
UBR1-209ENST00000569243 IGLV1-40P01703 118 aa8.09□□□□□ -1.11
UBR1-209ENST00000569243 LCE4AQ5TA78 99 aa8.09□□□□□ -1.11
UBR1-209ENST00000569243 WFDC8Q8IUA0 241 aa8.09□□□□□ -1.11
UBR1-209ENST00000569243 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.09□□□□□ -1.11
UBR1-209ENST00000569243 ZNF280CQ8ND82 737 aa8.09□□□□□ -1.11
UBR1-209ENST00000569243 ANKIB1Q9P2G1 1089 aa8.09□□□□□ -1.11
UBR1-209ENST00000569243 PCDHGA11Q9Y5H2 935 aa8.09□□□□□ -1.11
UBR1-209ENST00000569243 GRIK5Q16478 980 aa8.08□□□□□ -1.12
UBR1-209ENST00000569243 FAM35AQ86V20 835 aa8.08□□□□□ -1.12
UBR1-209ENST00000569243 GSC2O15499 205 aa8.07□□□□□ -1.12
UBR1-209ENST00000569243 DEAF1O75398 565 aaPredicted RBP8.07□□□□□ -1.12
UBR1-209ENST00000569243 CPB1P15086 417 aa8.07□□□□□ -1.12
UBR1-209ENST00000569243 SPINK2P20155 84 aa8.07□□□□□ -1.12
UBR1-209ENST00000569243 OGFOD2Q6N063 350 aa8.07□□□□□ -1.12
UBR1-209ENST00000569243 ZNF358Q9NW07 568 aa8.07□□□□□ -1.12
UBR1-209ENST00000569243 RAXQ9Y2V3 346 aa8.07□□□□□ -1.12
UBR1-209ENST00000569243 PLAURQ03405 335 aa8.06□□□□□ -1.12
UBR1-209ENST00000569243 SUSD3Q96L08 255 aa8.06□□□□□ -1.12
UBR1-209ENST00000569243 HCN4Q9Y3Q4 1203 aa8.06□□□□□ -1.12
UBR1-209ENST00000569243 DLL1O00548 723 aa8.05□□□□□ -1.12
UBR1-209ENST00000569243 TNS4Q8IZW8 715 aa8.05□□□□□ -1.12
UBR1-209ENST00000569243 PNMA5Q96PV4 448 aa8.05□□□□□ -1.12
UBR1-209ENST00000569243 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
UBR1-209ENST00000569243 ADGRE2Q9UHX3 823 aa8.05□□□□□ -1.12
UBR1-209ENST00000569243 TBC1D2BQ9UPU7 963 aa8.05□□□□□ -1.12
UBR1-209ENST00000569243 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.05□□□□□ -1.12
UBR1-209ENST00000569243 WNT11O96014 354 aa8.04□□□□□ -1.12
UBR1-209ENST00000569243 EPHA4P54764 986 aa8.04□□□□□ -1.12
UBR1-209ENST00000569243 IRF5Q13568 498 aa8.04□□□□□ -1.12
UBR1-209ENST00000569243 WASHC4Q2M389 1173 aa8.04□□□□□ -1.12
UBR1-209ENST00000569243 ZDHHC13Q8IUH4 622 aa8.04□□□□□ -1.12
UBR1-209ENST00000569243 STOML1Q9UBI4 398 aa8.04□□□□□ -1.12
UBR1-209ENST00000569243 F8W735 103 aaPredicted RBP8.03□□□□□ -1.12
UBR1-209ENST00000569243 C8AP07357 584 aa8.03□□□□□ -1.12
UBR1-209ENST00000569243 NFKB1P19838 968 aa8.03□□□□□ -1.12
UBR1-209ENST00000569243 GRIK1P39086 918 aa8.03□□□□□ -1.12
UBR1-209ENST00000569243 PSME1Q06323 249 aa8.03□□□□□ -1.12
UBR1-209ENST00000569243 PERM1Q5SV97 790 aa8.03□□□□□ -1.12
UBR1-209ENST00000569243 C1orf53Q5VUE5 145 aa8.03□□□□□ -1.12
UBR1-209ENST00000569243 INTS5Q6P9B9 1019 aaKnown RBP8.03□□□□□ -1.12
UBR1-209ENST00000569243 GSX2Q9BZM3 304 aa8.03□□□□□ -1.12
UBR1-209ENST00000569243 PHACTR1Q9C0D0 580 aa8.03□□□□□ -1.12
UBR1-209ENST00000569243 EFCC1Q9HA90 598 aa8.03□□□□□ -1.12
UBR1-209ENST00000569243 SOX11P35716 441 aa8.02□□□□□ -1.13
UBR1-209ENST00000569243 ELMSAN1Q6PJG2 1045 aa8.02□□□□□ -1.13
UBR1-209ENST00000569243 TMEM130Q8N3G9 435 aa8.02□□□□□ -1.13
UBR1-209ENST00000569243 MRPL18Q9H0U6 180 aaKnown RBP8.02□□□□□ -1.13
UBR1-209ENST00000569243 FRRS1LQ9P0K9 344 aa8.02□□□□□ -1.13
UBR1-209ENST00000569243 GLB1P16278 677 aa8.01□□□□□ -1.13
UBR1-209ENST00000569243 VAC14Q08AM6 782 aa8.01□□□□□ -1.13
UBR1-209ENST00000569243 BTLAQ7Z6A9 289 aa8.01□□□□□ -1.13
UBR1-209ENST00000569243 DTX1Q86Y01 620 aa8.01□□□□□ -1.13
UBR1-209ENST00000569243 KRTAP4-5Q9BYR2 181 aa8.01□□□□□ -1.13
UBR1-209ENST00000569243 AGGF1Q8N302 714 aaeCLIP8□□□□□ -1.13
UBR1-209ENST00000569243 GTF2IP78347 998 aa7.99□□□□□ -1.13
UBR1-209ENST00000569243 CCINQ13939 588 aa7.99□□□□□ -1.13
UBR1-209ENST00000569243 PSMA6P60900 246 aaKnown RBP7.98□□□□□ -1.13
UBR1-209ENST00000569243 MCM6Q14566 821 aa7.98□□□□□ -1.13
UBR1-209ENST00000569243 PCSK7Q16549 785 aa7.98□□□□□ -1.13
UBR1-209ENST00000569243 GDPD2Q9HCC8 539 aa7.98□□□□□ -1.13
UBR1-209ENST00000569243 ZBTB42B2RXF5 422 aa7.97□□□□□ -1.13
UBR1-209ENST00000569243 MLLT1Q03111 559 aaPredicted RBP7.97□□□□□ -1.13
UBR1-209ENST00000569243 NFIAQ12857 509 aa7.97□□□□□ -1.13
UBR1-209ENST00000569243 EML3Q32P44 896 aa7.97□□□□□ -1.13
UBR1-209ENST00000569243 Q6ZS46 218 aa7.97□□□□□ -1.13
UBR1-209ENST00000569243 UBL7Q96S82 380 aaPredicted RBP7.97□□□□□ -1.13
UBR1-209ENST00000569243 NOD1Q9Y239 953 aa7.97□□□□□ -1.13
UBR1-209ENST00000569243 CHMP3Q9Y3E7 222 aa7.97□□□□□ -1.13
UBR1-209ENST00000569243 DHX15O43143 795 aaKnown RBP7.96□□□□□ -1.14
UBR1-209ENST00000569243 ABI1Q8IZP0 508 aa7.96□□□□□ -1.14
UBR1-209ENST00000569243 TTC9Q92623 222 aa7.96□□□□□ -1.14
UBR1-209ENST00000569243 SMG9Q9H0W8 520 aaKnown RBP7.96□□□□□ -1.14
UBR1-209ENST00000569243 PRR19A6NJB7 356 aa7.95□□□□□ -1.14
UBR1-209ENST00000569243 PIK3CDO00329 1044 aa7.95□□□□□ -1.14
UBR1-209ENST00000569243 ABL2P42684 1182 aa7.95□□□□□ -1.14
UBR1-209ENST00000569243 HIRAP54198 1017 aaPredicted RBP7.95□□□□□ -1.14
UBR1-209ENST00000569243 POU5F2Q8N7G0 328 aa7.95□□□□□ -1.14
UBR1-209ENST00000569243 TSPAN10Q9H1Z9 355 aaPredicted RBP7.95□□□□□ -1.14
UBR1-209ENST00000569243 LZTS3O60299 673 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms