RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 BCS1LQ9Y276 419 aa16.02■□□□□ 0.15
NSMCE1-214ENST00000569236 UTP14AQ9BVJ6 771 aaKnown RBP16.01■□□□□ 0.15
NSMCE1-214ENST00000569236 NTSR2O95665 410 aa16■□□□□ 0.15
NSMCE1-214ENST00000569236 ERFEQ4G0M1 354 aa16■□□□□ 0.15
NSMCE1-214ENST00000569236 DALRD3Q5D0E6 543 aaKnown RBP16■□□□□ 0.15
NSMCE1-214ENST00000569236 G2E3Q7L622 706 aa16■□□□□ 0.15
NSMCE1-214ENST00000569236 NLRP10Q86W26 655 aa16■□□□□ 0.15
NSMCE1-214ENST00000569236 TRMT2AQ8IZ69 625 aaKnown RBP16■□□□□ 0.15
NSMCE1-214ENST00000569236 COL11A2P13942 1736 aaPredicted RBP16■□□□□ 0.15
NSMCE1-214ENST00000569236 FLIIQ13045 1269 aa16■□□□□ 0.15
NSMCE1-214ENST00000569236 KSR2Q6VAB6 950 aa16■□□□□ 0.15
NSMCE1-214ENST00000569236 ISCA1Q9BUE6 129 aa16■□□□□ 0.15
NSMCE1-214ENST00000569236 PI4KAP2A4QPH2 592 aa15.99■□□□□ 0.15
NSMCE1-214ENST00000569236 ATP5J2-PTCD1G3V325 749 aa15.99■□□□□ 0.15
NSMCE1-214ENST00000569236 IRX6P78412 446 aaPredicted RBP15.99■□□□□ 0.15
NSMCE1-214ENST00000569236 PI4KAP1Q8N8J0 262 aa15.99■□□□□ 0.15
NSMCE1-214ENST00000569236 MAP3K2Q9Y2U5 619 aa15.99■□□□□ 0.15
NSMCE1-214ENST00000569236 ABCC12Q96J65 1359 aa15.99■□□□□ 0.15
NSMCE1-214ENST00000569236 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
NSMCE1-214ENST00000569236 ZNF622Q969S3 477 aaKnown RBP eCLIP15.98■□□□□ 0.15
NSMCE1-214ENST00000569236 MYD88Q99836 296 aa15.98■□□□□ 0.15
NSMCE1-214ENST00000569236 METTL22Q9BUU2 404 aaPredicted RBP15.98■□□□□ 0.15
NSMCE1-214ENST00000569236 TRMT112Q9UI30 125 aaKnown RBP15.98■□□□□ 0.15
NSMCE1-214ENST00000569236 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
NSMCE1-214ENST00000569236 TNRC6CQ9HCJ0 1690 aaKnown RBP15.98■□□□□ 0.15
NSMCE1-214ENST00000569236 SRGNP10124 158 aa15.98■□□□□ 0.15
NSMCE1-214ENST00000569236 TTLL6Q8N841 843 aa15.98■□□□□ 0.15
NSMCE1-214ENST00000569236 ADCY9O60503 1353 aa15.97■□□□□ 0.15
NSMCE1-214ENST00000569236 RIC1Q4ADV7 1423 aa15.97■□□□□ 0.15
NSMCE1-214ENST00000569236 KLRG2A4D1S0 409 aaPredicted RBP15.97■□□□□ 0.15
NSMCE1-214ENST00000569236 TRIM28Q13263 835 aaKnown RBP15.97■□□□□ 0.15
NSMCE1-214ENST00000569236 ZNF428Q96B54 188 aa15.97■□□□□ 0.15
NSMCE1-214ENST00000569236 MASTLQ96GX5 879 aa15.97■□□□□ 0.15
NSMCE1-214ENST00000569236 SH3TC1Q8TE82 1336 aa15.97■□□□□ 0.15
NSMCE1-214ENST00000569236 CHD4Q14839 1912 aa15.97■□□□□ 0.15
NSMCE1-214ENST00000569236 NEXNQ0ZGT2 675 aa15.96■□□□□ 0.15
NSMCE1-214ENST00000569236 STYK1Q6J9G0 422 aa15.96■□□□□ 0.15
NSMCE1-214ENST00000569236 CT47B1P0C2W7 299 aaPredicted RBP15.95■□□□□ 0.14
NSMCE1-214ENST00000569236 NPR1P16066 1061 aa15.95■□□□□ 0.14
NSMCE1-214ENST00000569236 CNKSR1Q969H4 720 aa15.95■□□□□ 0.14
NSMCE1-214ENST00000569236 PPP4R2Q9NY27 417 aa15.95■□□□□ 0.14
NSMCE1-214ENST00000569236 CACNA1SQ13698 1873 aa15.95■□□□□ 0.14
NSMCE1-214ENST00000569236 SLC10A5Q5PT55 438 aa15.95■□□□□ 0.14
NSMCE1-214ENST00000569236 CCDC191Q8NCU4 936 aa15.95■□□□□ 0.14
NSMCE1-214ENST00000569236 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
NSMCE1-214ENST00000569236 RCAN3Q9UKA8 241 aa15.95■□□□□ 0.14
NSMCE1-214ENST00000569236 CRY2Q49AN0 593 aa15.94■□□□□ 0.14
NSMCE1-214ENST00000569236 DNAAF4Q8WXU2 420 aa15.94■□□□□ 0.14
NSMCE1-214ENST00000569236 CWC25Q9NXE8 425 aaPredicted RBP15.94■□□□□ 0.14
NSMCE1-214ENST00000569236 SYNE4Q8N205 404 aa15.93■□□□□ 0.14
NSMCE1-214ENST00000569236 SSH1Q8WYL5 1049 aa15.93■□□□□ 0.14
NSMCE1-214ENST00000569236 RPGRQ92834 1020 aaKnown RBP15.93■□□□□ 0.14
NSMCE1-214ENST00000569236 FAM89AQ96GI7 184 aa15.93■□□□□ 0.14
NSMCE1-214ENST00000569236 HCLS1P14317 486 aaPredicted RBP15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 ALDH1L2Q3SY69 923 aa15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 RTL5Q5HYW3 569 aaPredicted RBP15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 ARHGAP27Q6ZUM4 889 aa15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 MRPL50Q8N5N7 158 aaKnown RBP15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 IGKV5-2P06315 115 aa15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 ALDH1B1P30837 517 aa15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 PRPF40BQ6NWY9 871 aaKnown RBP15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 ZBTB38Q8NAP3 1195 aaPredicted RBP15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 BCL2L13Q9BXK5 485 aa15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 DDX60Q8IY21 1712 aaKnown RBP15.92■□□□□ 0.14
NSMCE1-214ENST00000569236 SLX4Q8IY92 1834 aa15.91■□□□□ 0.14
NSMCE1-214ENST00000569236 LAMB2P55268 1798 aa15.91■□□□□ 0.14
NSMCE1-214ENST00000569236 CWF19L2Q2TBE0 894 aaKnown RBP15.91■□□□□ 0.14
NSMCE1-214ENST00000569236 C3orf67Q6ZVT6 689 aa15.91■□□□□ 0.14
NSMCE1-214ENST00000569236 SMC4Q9NTJ3 1288 aa15.91■□□□□ 0.14
NSMCE1-214ENST00000569236 NEURL1BA8MQ27 555 aa15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 F6X3S4 739 aa15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 PCCAP05165 728 aaPredicted RBP15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 YY1P25490 414 aa15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 RRP1P56182 461 aaKnown RBP15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 LINS1Q8NG48 757 aa15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 RBM17Q96I25 401 aaKnown RBP15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 ZNF219Q9P2Y4 722 aaPredicted RBP15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 IRS4O14654 1257 aaPredicted RBP15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 C21orf2O43822 256 aa15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 HOXA10P31260 410 aaPredicted RBP15.9■□□□□ 0.14
NSMCE1-214ENST00000569236 PTPRCP08575 1304 aa15.89■□□□□ 0.13
NSMCE1-214ENST00000569236 CRAMP1Q96RY5 1269 aa15.88■□□□□ 0.13
NSMCE1-214ENST00000569236 GCKRQ14397 625 aa15.87■□□□□ 0.13
NSMCE1-214ENST00000569236 SOGA3Q5TF21 947 aa15.87■□□□□ 0.13
NSMCE1-214ENST00000569236 SLC4A10Q6U841 1118 aa15.87■□□□□ 0.13
NSMCE1-214ENST00000569236 JARID2Q92833 1246 aaPredicted RBP15.87■□□□□ 0.13
NSMCE1-214ENST00000569236 CDHR2Q9BYE9 1310 aa15.87■□□□□ 0.13
NSMCE1-214ENST00000569236 RARSP54136 660 aaKnown RBP15.87■□□□□ 0.13
NSMCE1-214ENST00000569236 BEND3Q5T5X7 828 aa15.87■□□□□ 0.13
NSMCE1-214ENST00000569236 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
NSMCE1-214ENST00000569236 SF3B3Q15393 1217 aaKnown RBP15.86■□□□□ 0.13
NSMCE1-214ENST00000569236 ABCC4O15439 1325 aa15.86■□□□□ 0.13
NSMCE1-214ENST00000569236 FER1L6Q2WGJ9 1857 aa15.86■□□□□ 0.13
NSMCE1-214ENST00000569236 PDE8AO60658 829 aa15.85■□□□□ 0.13
NSMCE1-214ENST00000569236 UBE3BQ7Z3V4 1068 aa15.85■□□□□ 0.13
NSMCE1-214ENST00000569236 C7orf43Q8WVR3 580 aa15.85■□□□□ 0.13
NSMCE1-214ENST00000569236 H7C1W4 665 aa15.85■□□□□ 0.13
NSMCE1-214ENST00000569236 PPEF1O14829 653 aaPredicted RBP15.85■□□□□ 0.13
NSMCE1-214ENST00000569236 CCDC93Q567U6 631 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms