RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 PPP1R1BQ9UD71 204 aaPredicted RBP21.23■□□□□ 0.99
COMMD4-224ENST00000568877 TRMT112Q9UI30 125 aaKnown RBP21.23■□□□□ 0.99
COMMD4-224ENST00000568877 GTF2E1P29083 439 aaPredicted RBP21.22■□□□□ 0.99
COMMD4-224ENST00000568877 LRP5O75197 1615 aa21.22■□□□□ 0.99
COMMD4-224ENST00000568877 NRXN2Q9P2S2 1712 aa21.21■□□□□ 0.99
COMMD4-224ENST00000568877 PXDNLA1KZ92 1463 aa21.21■□□□□ 0.99
COMMD4-224ENST00000568877 ALDH1L1O75891 902 aa21.21■□□□□ 0.99
COMMD4-224ENST00000568877 ST5P78524 1137 aa21.21■□□□□ 0.99
COMMD4-224ENST00000568877 NUTM1Q86Y26 1132 aa21.21■□□□□ 0.99
COMMD4-224ENST00000568877 TNNQ9UQP3 1299 aa21.21■□□□□ 0.99
COMMD4-224ENST00000568877 ABCC4O15439 1325 aa21.21■□□□□ 0.99
COMMD4-224ENST00000568877 RNF123Q5XPI4 1314 aa21.21■□□□□ 0.99
COMMD4-224ENST00000568877 CCT4P50991 539 aaKnown RBP21.2■□□□□ 0.98
COMMD4-224ENST00000568877 GCKRQ14397 625 aa21.2■□□□□ 0.98
COMMD4-224ENST00000568877 ERFEQ4G0M1 354 aa21.2■□□□□ 0.98
COMMD4-224ENST00000568877 CCDC24Q8N4L8 307 aa21.2■□□□□ 0.98
COMMD4-224ENST00000568877 ZBTB38Q8NAP3 1195 aaPredicted RBP21.2■□□□□ 0.98
COMMD4-224ENST00000568877 CLUAP1Q96AJ1 413 aa21.2■□□□□ 0.98
COMMD4-224ENST00000568877 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.19■□□□□ 0.98
COMMD4-224ENST00000568877 FAM89AQ96GI7 184 aa21.19■□□□□ 0.98
COMMD4-224ENST00000568877 CD2APQ9Y5K6 639 aa21.19■□□□□ 0.98
COMMD4-224ENST00000568877 AFDNP55196 1824 aaKnown RBP21.19■□□□□ 0.98
COMMD4-224ENST00000568877 SH3TC1Q8TE82 1336 aa21.19■□□□□ 0.98
COMMD4-224ENST00000568877 C10orf71Q711Q0 1435 aa21.19■□□□□ 0.98
COMMD4-224ENST00000568877 PLIN1O60240 522 aa21.18■□□□□ 0.98
COMMD4-224ENST00000568877 PCCAP05165 728 aaPredicted RBP21.18■□□□□ 0.98
COMMD4-224ENST00000568877 SYNE4Q8N205 404 aa21.18■□□□□ 0.98
COMMD4-224ENST00000568877 KLHL34Q8N239 644 aa21.18■□□□□ 0.98
COMMD4-224ENST00000568877 BRIP1Q9BX63 1249 aa21.18■□□□□ 0.98
COMMD4-224ENST00000568877 H7C1W4 665 aa21.17■□□□□ 0.98
COMMD4-224ENST00000568877 RTL5Q5HYW3 569 aaPredicted RBP21.17■□□□□ 0.98
COMMD4-224ENST00000568877 SLC10A5Q5PT55 438 aa21.17■□□□□ 0.98
COMMD4-224ENST00000568877 INTS3Q68E01 1043 aaKnown RBP21.17■□□□□ 0.98
COMMD4-224ENST00000568877 FTSJ3Q8IY81 847 aaKnown RBP21.17■□□□□ 0.98
COMMD4-224ENST00000568877 DZIP1LQ8IYY4 767 aaKnown RBP21.17■□□□□ 0.98
COMMD4-224ENST00000568877 FHDC1Q9C0D6 1143 aaPredicted RBP21.17■□□□□ 0.98
COMMD4-224ENST00000568877 ABCC12Q96J65 1359 aa21.17■□□□□ 0.98
COMMD4-224ENST00000568877 MS4A1P11836 297 aa21.16■□□□□ 0.98
COMMD4-224ENST00000568877 JARID2Q92833 1246 aaPredicted RBP21.16■□□□□ 0.98
COMMD4-224ENST00000568877 GRM8O00222 908 aa21.15■□□□□ 0.98
COMMD4-224ENST00000568877 PDE6BP35913 854 aa21.15■□□□□ 0.98
COMMD4-224ENST00000568877 TMEM57Q8N5G2 664 aa21.15■□□□□ 0.98
COMMD4-224ENST00000568877 C9orf78Q9NZ63 289 aaPredicted RBP21.15■□□□□ 0.98
COMMD4-224ENST00000568877 RIC1Q4ADV7 1423 aa21.14■□□□□ 0.98
COMMD4-224ENST00000568877 IRS4O14654 1257 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-224ENST00000568877 RLBP1P12271 317 aa21.14■□□□□ 0.97
COMMD4-224ENST00000568877 HCLS1P14317 486 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-224ENST00000568877 TGFB2P61812 414 aa21.14■□□□□ 0.97
COMMD4-224ENST00000568877 UBE3BQ7Z3V4 1068 aa21.14■□□□□ 0.97
COMMD4-224ENST00000568877 CDHR2Q9BYE9 1310 aa21.13■□□□□ 0.97
COMMD4-224ENST00000568877 HSP90B1P14625 803 aaKnown RBP21.13■□□□□ 0.97
COMMD4-224ENST00000568877 CASP7P55210 303 aa21.13■□□□□ 0.97
COMMD4-224ENST00000568877 RRP1P56182 461 aaKnown RBP21.13■□□□□ 0.97
COMMD4-224ENST00000568877 PANK1Q8TE04 598 aa21.13■□□□□ 0.97
COMMD4-224ENST00000568877 SRCAPQ6ZRS2 3230 aa21.12■□□□□ 0.97
COMMD4-224ENST00000568877 UTYO14607 1347 aa21.12■□□□□ 0.97
COMMD4-224ENST00000568877 KLRG2A4D1S0 409 aaPredicted RBP21.12■□□□□ 0.97
COMMD4-224ENST00000568877 NLRP3Q96P20 1036 aa21.12■□□□□ 0.97
COMMD4-224ENST00000568877 SYT17Q9BSW7 474 aa21.12■□□□□ 0.97
COMMD4-224ENST00000568877 USP44Q9H0E7 712 aa21.12■□□□□ 0.97
COMMD4-224ENST00000568877 PDZRN3Q9UPQ7 1066 aa21.12■□□□□ 0.97
COMMD4-224ENST00000568877 KIF13BQ9NQT8 1826 aa21.11■□□□□ 0.97
COMMD4-224ENST00000568877 PDE3AQ14432 1141 aa21.11■□□□□ 0.97
COMMD4-224ENST00000568877 C2CD5Q86YS7 1000 aa21.11■□□□□ 0.97
COMMD4-224ENST00000568877 N4BP2Q86UW6 1770 aaPredicted RBP21.1■□□□□ 0.97
COMMD4-224ENST00000568877 H0YIN7 160 aa21.1■□□□□ 0.97
COMMD4-224ENST00000568877 PDE8AO60658 829 aa21.1■□□□□ 0.97
COMMD4-224ENST00000568877 NBPF7P0C2Y1 421 aaPredicted RBP21.1■□□□□ 0.97
COMMD4-224ENST00000568877 C3orf67Q6ZVT6 689 aa21.1■□□□□ 0.97
COMMD4-224ENST00000568877 NLGN2Q8NFZ4 835 aa21.1■□□□□ 0.97
COMMD4-224ENST00000568877 A0A0G2JLW4 131 aa21.09■□□□□ 0.97
COMMD4-224ENST00000568877 DPEP1P16444 411 aa21.09■□□□□ 0.97
COMMD4-224ENST00000568877 CHRNA5P30532 468 aa21.09■□□□□ 0.97
COMMD4-224ENST00000568877 C20orf194Q5TEA3 1177 aa21.09■□□□□ 0.97
COMMD4-224ENST00000568877 ITPRIPQ8IWB1 547 aa21.09■□□□□ 0.97
COMMD4-224ENST00000568877 ANKRD31Q8N7Z5 1873 aa21.09■□□□□ 0.97
COMMD4-224ENST00000568877 SRGNP10124 158 aa21.08■□□□□ 0.97
COMMD4-224ENST00000568877 CRY2Q49AN0 593 aa21.08■□□□□ 0.97
COMMD4-224ENST00000568877 PLA2G12BQ9BX93 195 aa21.08■□□□□ 0.97
COMMD4-224ENST00000568877 SUPT16HQ9Y5B9 1047 aaKnown RBP21.08■□□□□ 0.97
COMMD4-224ENST00000568877 TNRC6CQ9HCJ0 1690 aaKnown RBP21.08■□□□□ 0.96
COMMD4-224ENST00000568877 KCNA3P22001 575 aa21.07■□□□□ 0.96
COMMD4-224ENST00000568877 SF3B3Q15393 1217 aaKnown RBP21.07■□□□□ 0.96
COMMD4-224ENST00000568877 MEIS3Q99687 375 aa21.07■□□□□ 0.96
COMMD4-224ENST00000568877 DDX60Q8IY21 1712 aaKnown RBP21.07■□□□□ 0.96
COMMD4-224ENST00000568877 GNAI3P08754 354 aa21.06■□□□□ 0.96
COMMD4-224ENST00000568877 UBTFL1P0CB47 393 aaPredicted RBP21.06■□□□□ 0.96
COMMD4-224ENST00000568877 NPR1P16066 1061 aa21.06■□□□□ 0.96
COMMD4-224ENST00000568877 MVPQ14764 893 aaKnown RBP21.06■□□□□ 0.96
COMMD4-224ENST00000568877 RPGRQ92834 1020 aaKnown RBP21.06■□□□□ 0.96
COMMD4-224ENST00000568877 MASTLQ96GX5 879 aa21.06■□□□□ 0.96
COMMD4-224ENST00000568877 SUCLG2Q96I99 432 aa21.06■□□□□ 0.96
COMMD4-224ENST00000568877 COG6Q9Y2V7 657 aa21.06■□□□□ 0.96
COMMD4-224ENST00000568877 CENPBP07199 599 aaPredicted RBP21.05■□□□□ 0.96
COMMD4-224ENST00000568877 CTSWP56202 376 aa21.05■□□□□ 0.96
COMMD4-224ENST00000568877 FOXO4P98177 505 aa21.05■□□□□ 0.96
COMMD4-224ENST00000568877 ZNF622Q969S3 477 aaKnown RBP eCLIP21.05■□□□□ 0.96
COMMD4-224ENST00000568877 LAMB2P55268 1798 aa21.05■□□□□ 0.96
COMMD4-224ENST00000568877 KIAA1551Q9HCM1 1747 aa21.04■□□□□ 0.96
COMMD4-224ENST00000568877 ZBTB7BO15156 539 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms