RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 FOXR1Q6PIV2 292 aa10.04□□□□□ -0.8
CYLD-213ENST00000568744 NUDT16Q96DE0 195 aaKnown RBP10.04□□□□□ -0.8
CYLD-213ENST00000568744 RTCBQ9Y3I0 505 aaKnown RBP10.04□□□□□ -0.8
CYLD-213ENST00000568744 GPR25O00155 361 aa10.03□□□□□ -0.8
CYLD-213ENST00000568744 MZF1P28698 734 aaPredicted RBP10.03□□□□□ -0.8
CYLD-213ENST00000568744 INPP5BP32019 993 aa10.03□□□□□ -0.8
CYLD-213ENST00000568744 SAMD5Q5TGI4 173 aa10.03□□□□□ -0.8
CYLD-213ENST00000568744 SV2AQ7L0J3 742 aa10.03□□□□□ -0.8
CYLD-213ENST00000568744 GMCL1Q96IK5 515 aa10.03□□□□□ -0.8
CYLD-213ENST00000568744 TRERF1Q96PN7 1200 aa10.03□□□□□ -0.8
CYLD-213ENST00000568744 PDGFAP04085 211 aa10.02□□□□□ -0.81
CYLD-213ENST00000568744 ZSCAN29Q8IWY8 852 aaPredicted RBP10.02□□□□□ -0.81
CYLD-213ENST00000568744 ABHD17AQ96GS6 310 aa10.02□□□□□ -0.81
CYLD-213ENST00000568744 NXF1Q9UBU9 619 aaKnown RBP10.02□□□□□ -0.81
CYLD-213ENST00000568744 FAM157BP0CG42 384 aa10.01□□□□□ -0.81
CYLD-213ENST00000568744 SFSWAPQ12872 951 aaKnown RBP10.01□□□□□ -0.81
CYLD-213ENST00000568744 PHF24Q9UPV7 400 aa10.01□□□□□ -0.81
CYLD-213ENST00000568744 UBAP1LF5GYI3 381 aa10□□□□□ -0.81
CYLD-213ENST00000568744 BNIP3LO60238 219 aa10□□□□□ -0.81
CYLD-213ENST00000568744 MAPTP10636 758 aaKnown RBP10□□□□□ -0.81
CYLD-213ENST00000568744 USP5P45974 858 aa10□□□□□ -0.81
CYLD-213ENST00000568744 TNP2Q05952 138 aa10□□□□□ -0.81
CYLD-213ENST00000568744 KCNH4Q9UQ05 1017 aa10□□□□□ -0.81
CYLD-213ENST00000568744 A6NHS1 94 aa9.99□□□□□ -0.81
CYLD-213ENST00000568744 UBAP2LQ14157 1087 aaKnown RBP9.99□□□□□ -0.81
CYLD-213ENST00000568744 MARK1Q9P0L2 795 aa9.99□□□□□ -0.81
CYLD-213ENST00000568744 FNDC3AQ9Y2H6 1198 aaKnown RBP9.99□□□□□ -0.81
CYLD-213ENST00000568744 CD33P20138 364 aa9.98□□□□□ -0.81
CYLD-213ENST00000568744 STRN4Q9NRL3 753 aa9.98□□□□□ -0.81
CYLD-213ENST00000568744 ATXN7L1Q9ULK2 861 aaPredicted RBP9.98□□□□□ -0.81
CYLD-213ENST00000568744 ANKRD33BA6NCL7 494 aa9.97□□□□□ -0.81
CYLD-213ENST00000568744 XYLBO75191 536 aa9.97□□□□□ -0.81
CYLD-213ENST00000568744 RPLP1P05386 114 aaKnown RBP9.97□□□□□ -0.81
CYLD-213ENST00000568744 FGFR3P22607 806 aa9.97□□□□□ -0.81
CYLD-213ENST00000568744 PDE3BQ13370 1112 aa9.97□□□□□ -0.81
CYLD-213ENST00000568744 KRT25Q7Z3Z0 450 aa9.97□□□□□ -0.81
CYLD-213ENST00000568744 TMC7Q7Z402 723 aa9.97□□□□□ -0.81
CYLD-213ENST00000568744 ASB16Q96NS5 453 aa9.97□□□□□ -0.81
CYLD-213ENST00000568744 CITED4Q96RK1 184 aa9.97□□□□□ -0.81
CYLD-213ENST00000568744 RBCK1Q9BYM8 510 aa9.97□□□□□ -0.81
CYLD-213ENST00000568744 GGNBP2Q9H3C7 697 aa9.97□□□□□ -0.81
CYLD-213ENST00000568744 EFSO43281 561 aa9.96□□□□□ -0.82
CYLD-213ENST00000568744 GRNP28799 593 aaKnown RBP9.96□□□□□ -0.82
CYLD-213ENST00000568744 GRIN2CQ14957 1233 aa9.96□□□□□ -0.82
CYLD-213ENST00000568744 NDFIP2Q9NV92 336 aa9.96□□□□□ -0.82
CYLD-213ENST00000568744 KCNMB2Q9Y691 235 aa9.96□□□□□ -0.82
CYLD-213ENST00000568744 LAMC2Q13753 1193 aa9.95□□□□□ -0.82
CYLD-213ENST00000568744 TRIP4Q15650 581 aaPredicted RBP9.95□□□□□ -0.82
CYLD-213ENST00000568744 ZNF438Q7Z4V0 828 aa9.95□□□□□ -0.82
CYLD-213ENST00000568744 GJD3Q8N144 294 aa9.95□□□□□ -0.82
CYLD-213ENST00000568744 PNMA5Q96PV4 448 aa9.95□□□□□ -0.82
CYLD-213ENST00000568744 EHHADHQ08426 723 aa9.94□□□□□ -0.82
CYLD-213ENST00000568744 CCINQ13939 588 aa9.94□□□□□ -0.82
CYLD-213ENST00000568744 DNAJC14Q6Y2X3 702 aaPredicted RBP9.94□□□□□ -0.82
CYLD-213ENST00000568744 FOXD4L4Q8WXT5 416 aaPredicted RBP9.94□□□□□ -0.82
CYLD-213ENST00000568744 CFHR5Q9BXR6 569 aa9.94□□□□□ -0.82
CYLD-213ENST00000568744 NIF3L1Q9GZT8 377 aa9.94□□□□□ -0.82
CYLD-213ENST00000568744 H3BM21 787 aa9.93□□□□□ -0.82
CYLD-213ENST00000568744 SASH3O75995 380 aa9.93□□□□□ -0.82
CYLD-213ENST00000568744 KCNQ4P56696 695 aa9.93□□□□□ -0.82
CYLD-213ENST00000568744 CTBSQ01459 385 aa9.93□□□□□ -0.82
CYLD-213ENST00000568744 SPEM2Q0P670 501 aa9.93□□□□□ -0.82
CYLD-213ENST00000568744 RAB44Q7Z6P3 723 aaPredicted RBP9.93□□□□□ -0.82
CYLD-213ENST00000568744 SLC16A10Q8TF71 515 aa9.93□□□□□ -0.82
CYLD-213ENST00000568744 NANOS1Q8WY41 292 aaKnown RBP9.93□□□□□ -0.82
CYLD-213ENST00000568744 DMRTB1Q96MA1 342 aa9.93□□□□□ -0.82
CYLD-213ENST00000568744 PRR12Q9ULL5 1215 aa9.93□□□□□ -0.82
CYLD-213ENST00000568744 TERTO14746 1132 aaKnown RBP9.92□□□□□ -0.82
CYLD-213ENST00000568744 GPR182O15218 404 aa9.92□□□□□ -0.82
CYLD-213ENST00000568744 PLCB3Q01970 1234 aa9.92□□□□□ -0.82
CYLD-213ENST00000568744 RGS22Q8NE09 1264 aa9.92□□□□□ -0.82
CYLD-213ENST00000568744 BHMTQ93088 406 aa9.92□□□□□ -0.82
CYLD-213ENST00000568744 FAM129BQ96TA1 746 aa9.92□□□□□ -0.82
CYLD-213ENST00000568744 BMP4P12644 408 aa9.91□□□□□ -0.82
CYLD-213ENST00000568744 ERCC3P19447 782 aa9.91□□□□□ -0.82
CYLD-213ENST00000568744 MX2P20592 715 aa9.91□□□□□ -0.82
CYLD-213ENST00000568744 MAPK8P45983 427 aa9.91□□□□□ -0.82
CYLD-213ENST00000568744 NPAS3Q8IXF0 933 aa9.91□□□□□ -0.82
CYLD-213ENST00000568744 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
CYLD-213ENST00000568744 SLC30A3Q99726 388 aa9.91□□□□□ -0.82
CYLD-213ENST00000568744 GSX2Q9BZM3 304 aa9.91□□□□□ -0.82
CYLD-213ENST00000568744 ELP3Q9H9T3 547 aa9.91□□□□□ -0.82
CYLD-213ENST00000568744 HCN2Q9UL51 889 aa9.91□□□□□ -0.82
CYLD-213ENST00000568744 RARAP10276 462 aa9.9□□□□□ -0.82
CYLD-213ENST00000568744 NFKB1P19838 968 aa9.9□□□□□ -0.82
CYLD-213ENST00000568744 TARSP26639 723 aaKnown RBP9.9□□□□□ -0.82
CYLD-213ENST00000568744 TTC39BQ5VTQ0 682 aaPredicted RBP9.9□□□□□ -0.82
CYLD-213ENST00000568744 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
CYLD-213ENST00000568744 TBC1D8BQ0IIM8 1120 aa9.89□□□□□ -0.83
CYLD-213ENST00000568744 NEUROD1Q13562 356 aa9.89□□□□□ -0.83
CYLD-213ENST00000568744 PDE12Q6L8Q7 609 aaKnown RBP9.89□□□□□ -0.83
CYLD-213ENST00000568744 IGFLR1Q9H665 355 aa9.89□□□□□ -0.83
CYLD-213ENST00000568744 TMEM63CQ9P1W3 806 aa9.89□□□□□ -0.83
CYLD-213ENST00000568744 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.89□□□□□ -0.83
CYLD-213ENST00000568744 TREHO43280 583 aa9.88□□□□□ -0.83
CYLD-213ENST00000568744 NEFLP07196 543 aa9.88□□□□□ -0.83
CYLD-213ENST00000568744 ORC1Q13415 861 aa9.88□□□□□ -0.83
CYLD-213ENST00000568744 NPAS4Q8IUM7 802 aa9.88□□□□□ -0.83
CYLD-213ENST00000568744 COL25A1Q9BXS0 654 aaPredicted RBP9.88□□□□□ -0.83
CYLD-213ENST00000568744 FOXD3Q9UJU5 478 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms