RNA–Protein interactions for RNA: ENST00000568423.5

SCAMP5-218, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-218ENST00000568423 CACNA1FO60840 1977 aa23.05■■□□□ 1.28
SCAMP5-218ENST00000568423 ALDH1B1P30837 517 aa23.05■■□□□ 1.28
SCAMP5-218ENST00000568423 TRMT2AQ8IZ69 625 aaKnown RBP23.05■■□□□ 1.28
SCAMP5-218ENST00000568423 KLRG2A4D1S0 409 aaPredicted RBP23.04■■□□□ 1.28
SCAMP5-218ENST00000568423 GLTPD2A6NH11 291 aa23.04■■□□□ 1.28
SCAMP5-218ENST00000568423 ERFEQ4G0M1 354 aa23.04■■□□□ 1.28
SCAMP5-218ENST00000568423 RBM46Q8TBY0 533 aaKnown RBP23.04■■□□□ 1.28
SCAMP5-218ENST00000568423 COL11A2P13942 1736 aaPredicted RBP23.04■■□□□ 1.28
SCAMP5-218ENST00000568423 GPTP24298 496 aa23.03■■□□□ 1.28
SCAMP5-218ENST00000568423 GIGYF2Q6Y7W6 1299 aaKnown RBP23.03■■□□□ 1.28
SCAMP5-218ENST00000568423 PPP1R42Q7Z4L9 355 aa23.03■■□□□ 1.28
SCAMP5-218ENST00000568423 DBF4Q9UBU7 674 aaPredicted RBP23.03■■□□□ 1.28
SCAMP5-218ENST00000568423 LTBP3Q9NS15 1303 aa23.03■■□□□ 1.28
SCAMP5-218ENST00000568423 CCDC88AQ3V6T2 1871 aa23.02■■□□□ 1.28
SCAMP5-218ENST00000568423 PRELPP51888 382 aa23.02■■□□□ 1.28
SCAMP5-218ENST00000568423 CCDC93Q567U6 631 aa23.02■■□□□ 1.28
SCAMP5-218ENST00000568423 SLX4Q8IY92 1834 aa23.01■■□□□ 1.27
SCAMP5-218ENST00000568423 VAMP4O75379 141 aa23.01■■□□□ 1.27
SCAMP5-218ENST00000568423 VEGFAP15692 232 aaPredicted RBP23.01■■□□□ 1.27
SCAMP5-218ENST00000568423 APLP1P51693 650 aa23.01■■□□□ 1.27
SCAMP5-218ENST00000568423 PARP10Q53GL7 1025 aa23.01■■□□□ 1.27
SCAMP5-218ENST00000568423 NUTM1Q86Y26 1132 aa23.01■■□□□ 1.27
SCAMP5-218ENST00000568423 CCDC30Q5VVM6 783 aa23■■□□□ 1.27
SCAMP5-218ENST00000568423 CACNA1SQ13698 1873 aa22.99■■□□□ 1.27
SCAMP5-218ENST00000568423 FSTL1Q12841 308 aa22.99■■□□□ 1.27
SCAMP5-218ENST00000568423 HSP90AB3PQ58FF7 597 aa22.99■■□□□ 1.27
SCAMP5-218ENST00000568423 ZNF34Q8IZ26 560 aa22.99■■□□□ 1.27
SCAMP5-218ENST00000568423 RTKN2Q8IZC4 609 aa22.99■■□□□ 1.27
SCAMP5-218ENST00000568423 XAGE3Q8WTP9 111 aa22.99■■□□□ 1.27
SCAMP5-218ENST00000568423 RPGRQ92834 1020 aaKnown RBP22.99■■□□□ 1.27
SCAMP5-218ENST00000568423 FER1L6Q2WGJ9 1857 aa22.98■■□□□ 1.27
SCAMP5-218ENST00000568423 AIMP1Q12904 312 aaKnown RBP22.98■■□□□ 1.27
SCAMP5-218ENST00000568423 SUSD4Q5VX71 490 aa22.98■■□□□ 1.27
SCAMP5-218ENST00000568423 C7orf43Q8WVR3 580 aa22.98■■□□□ 1.27
SCAMP5-218ENST00000568423 CHMP4AQ9BY43 222 aa22.98■■□□□ 1.27
SCAMP5-218ENST00000568423 HYPKQ9NX55 129 aa22.98■■□□□ 1.27
SCAMP5-218ENST00000568423 CEP350Q5VT06 3117 aa22.98■■□□□ 1.27
SCAMP5-218ENST00000568423 IBTKQ9P2D0 1353 aaPredicted RBP22.98■■□□□ 1.27
SCAMP5-218ENST00000568423 TNRC6CQ9HCJ0 1690 aaKnown RBP22.97■■□□□ 1.27
SCAMP5-218ENST00000568423 COPS6Q7L5N1 327 aa22.97■■□□□ 1.27
SCAMP5-218ENST00000568423 UBN2Q6ZU65 1347 aa22.97■■□□□ 1.27
SCAMP5-218ENST00000568423 TCERG1O14776 1098 aaKnown RBP22.96■■□□□ 1.27
SCAMP5-218ENST00000568423 SMC1BQ8NDV3 1235 aa22.96■■□□□ 1.27
SCAMP5-218ENST00000568423 UTP14AQ9BVJ6 771 aaKnown RBP22.96■■□□□ 1.27
SCAMP5-218ENST00000568423 FKBP4Q02790 459 aaKnown RBP eCLIP22.95■■□□□ 1.26
SCAMP5-218ENST00000568423 CRY2Q49AN0 593 aa22.95■■□□□ 1.26
SCAMP5-218ENST00000568423 RBM17Q96I25 401 aaKnown RBP22.95■■□□□ 1.26
SCAMP5-218ENST00000568423 NLRP3Q96P20 1036 aa22.95■■□□□ 1.26
SCAMP5-218ENST00000568423 STK31Q9BXU1 1019 aa22.95■■□□□ 1.26
SCAMP5-218ENST00000568423 TMX4Q9H1E5 349 aaPredicted RBP22.95■■□□□ 1.26
SCAMP5-218ENST00000568423 PHAXQ9H814 394 aaKnown RBP22.95■■□□□ 1.26
SCAMP5-218ENST00000568423 ABCC12Q96J65 1359 aa22.94■■□□□ 1.26
SCAMP5-218ENST00000568423 CC2D2BQ6DHV5 1058 aa22.94■■□□□ 1.26
SCAMP5-218ENST00000568423 DICER1Q9UPY3 1922 aaKnown RBP22.94■■□□□ 1.26
SCAMP5-218ENST00000568423 TIAM2Q8IVF5 1701 aa22.94■■□□□ 1.26
SCAMP5-218ENST00000568423 NTSR2O95665 410 aa22.93■■□□□ 1.26
SCAMP5-218ENST00000568423 GRIPAP1Q4V328 841 aa22.92■■□□□ 1.26
SCAMP5-218ENST00000568423 RIC1Q4ADV7 1423 aa22.91■■□□□ 1.26
SCAMP5-218ENST00000568423 RNF123Q5XPI4 1314 aa22.91■■□□□ 1.26
SCAMP5-218ENST00000568423 HOXA10P31260 410 aaPredicted RBP22.91■■□□□ 1.26
SCAMP5-218ENST00000568423 ZNF277Q9NRM2 450 aaPredicted RBP22.91■■□□□ 1.26
SCAMP5-218ENST00000568423 SLC4A2P04920 1241 aa22.9■■□□□ 1.26
SCAMP5-218ENST00000568423 TCIRG1Q13488 830 aa22.9■■□□□ 1.26
SCAMP5-218ENST00000568423 G2E3Q7L622 706 aa22.9■■□□□ 1.26
SCAMP5-218ENST00000568423 PLBD2Q8NHP8 589 aa22.9■■□□□ 1.26
SCAMP5-218ENST00000568423 CRAMP1Q96RY5 1269 aa22.9■■□□□ 1.26
SCAMP5-218ENST00000568423 CT47B1P0C2W7 299 aaPredicted RBP22.89■■□□□ 1.25
SCAMP5-218ENST00000568423 OLFM4Q6UX06 510 aa22.89■■□□□ 1.25
SCAMP5-218ENST00000568423 SYNE4Q8N205 404 aa22.89■■□□□ 1.25
SCAMP5-218ENST00000568423 ZNF428Q96B54 188 aa22.89■■□□□ 1.25
SCAMP5-218ENST00000568423 TRMT112Q9UI30 125 aaKnown RBP22.89■■□□□ 1.25
SCAMP5-218ENST00000568423 DDNO94850 711 aaPredicted RBP22.88■■□□□ 1.25
SCAMP5-218ENST00000568423 FLIIQ13045 1269 aa22.88■■□□□ 1.25
SCAMP5-218ENST00000568423 SLC10A5Q5PT55 438 aa22.88■■□□□ 1.25
SCAMP5-218ENST00000568423 ANKRD13DQ6ZTN6 518 aa22.88■■□□□ 1.25
SCAMP5-218ENST00000568423 NLRP10Q86W26 655 aa22.88■■□□□ 1.25
SCAMP5-218ENST00000568423 JDP2Q8WYK2 163 aa22.88■■□□□ 1.25
SCAMP5-218ENST00000568423 IQCA1LA6NCM1 817 aa22.87■■□□□ 1.25
SCAMP5-218ENST00000568423 IARSP41252 1262 aaKnown RBP22.87■■□□□ 1.25
SCAMP5-218ENST00000568423 PSMD1Q99460 953 aa22.87■■□□□ 1.25
SCAMP5-218ENST00000568423 LAMB2P55268 1798 aa22.86■■□□□ 1.25
SCAMP5-218ENST00000568423 PPEF1O14829 653 aaPredicted RBP22.86■■□□□ 1.25
SCAMP5-218ENST00000568423 SSH1Q8WYL5 1049 aa22.86■■□□□ 1.25
SCAMP5-218ENST00000568423 WDR90Q96KV7 1748 aa22.85■■□□□ 1.25
SCAMP5-218ENST00000568423 SH3TC1Q8TE82 1336 aa22.85■■□□□ 1.25
SCAMP5-218ENST00000568423 POTECB2RU33 542 aa22.85■■□□□ 1.25
SCAMP5-218ENST00000568423 DDX58O95786 925 aaKnown RBP22.84■■□□□ 1.25
SCAMP5-218ENST00000568423 ALDH1L2Q3SY69 923 aa22.84■■□□□ 1.25
SCAMP5-218ENST00000568423 MRPL50Q8N5N7 158 aaKnown RBP22.84■■□□□ 1.25
SCAMP5-218ENST00000568423 HCLS1P14317 486 aaPredicted RBP22.83■■□□□ 1.25
SCAMP5-218ENST00000568423 DDX46Q7L014 1031 aaKnown RBP22.83■■□□□ 1.25
SCAMP5-218ENST00000568423 BCL2L13Q9BXK5 485 aa22.83■■□□□ 1.25
SCAMP5-218ENST00000568423 DDX60Q8IY21 1712 aaKnown RBP22.82■■□□□ 1.24
SCAMP5-218ENST00000568423 PI4KAP2A4QPH2 592 aa22.82■■□□□ 1.24
SCAMP5-218ENST00000568423 BBOX1O75936 387 aa22.82■■□□□ 1.24
SCAMP5-218ENST00000568423 FKBP5Q13451 457 aaPredicted RBP22.82■■□□□ 1.24
SCAMP5-218ENST00000568423 KSR2Q6VAB6 950 aa22.82■■□□□ 1.24
SCAMP5-218ENST00000568423 C3orf67Q6ZVT6 689 aa22.82■■□□□ 1.24
SCAMP5-218ENST00000568423 RIC3Q7Z5B4 369 aa22.82■■□□□ 1.24
SCAMP5-218ENST00000568423 PI4KAP1Q8N8J0 262 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms