RNA–Protein interactions for RNA: ENST00000568316.1

RBBP6-211, Transcript of RB binding protein 6, ubiquitin ligase, human

TSL 5

Gene RBBP6, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP6-211	ENST00000568316	CWC25	Q9NXE8	425 aa	Predicted RBP	31.53	■■■□□ 2.64
RBBP6-211	ENST00000568316	IBTK	Q9P2D0	1353 aa	Predicted RBP	31.53	■■■□□ 2.64
RBBP6-211	ENST00000568316	NEURL1B	A8MQ27	555 aa		31.52	■■■□□ 2.64
RBBP6-211	ENST00000568316	BEND3	Q5T5X7	828 aa		31.52	■■■□□ 2.64
RBBP6-211	ENST00000568316	CCDC191	Q8NCU4	936 aa		31.52	■■■□□ 2.64
RBBP6-211	ENST00000568316	ARHGAP45	Q92619	1136 aa		31.52	■■■□□ 2.64
RBBP6-211	ENST00000568316	FHDC1	Q9C0D6	1143 aa	Predicted RBP	31.52	■■■□□ 2.64
RBBP6-211	ENST00000568316	TRMT112	Q9UI30	125 aa	Known RBP	31.52	■■■□□ 2.64
RBBP6-211	ENST00000568316	ST5	P78524	1137 aa		31.51	■■■□□ 2.63
RBBP6-211	ENST00000568316	ERFE	Q4G0M1	354 aa		31.51	■■■□□ 2.63
RBBP6-211	ENST00000568316	TNN	Q9UQP3	1299 aa		31.51	■■■□□ 2.63
RBBP6-211	ENST00000568316	ZKSCAN2	Q63HK3	967 aa		31.5	■■■□□ 2.63
RBBP6-211	ENST00000568316	ATF7IP	Q6VMQ6	1270 aa		31.5	■■■□□ 2.63
RBBP6-211	ENST00000568316	ABCC12	Q96J65	1359 aa		31.5	■■■□□ 2.63
RBBP6-211	ENST00000568316	TRIM27	P14373	513 aa		31.49	■■■□□ 2.63
RBBP6-211	ENST00000568316	RTL5	Q5HYW3	569 aa	Predicted RBP	31.49	■■■□□ 2.63
RBBP6-211	ENST00000568316	SYNE4	Q8N205	404 aa		31.49	■■■□□ 2.63
RBBP6-211	ENST00000568316	FAM89A	Q96GI7	184 aa		31.48	■■■□□ 2.63
RBBP6-211	ENST00000568316	SRCIN1	Q9C0H9	1055 aa		31.48	■■■□□ 2.63
RBBP6-211	ENST00000568316	CD2AP	Q9Y5K6	639 aa		31.48	■■■□□ 2.63
RBBP6-211	ENST00000568316	SH3TC1	Q8TE82	1336 aa		31.48	■■■□□ 2.63
RBBP6-211	ENST00000568316	PXDNL	A1KZ92	1463 aa		31.47	■■■□□ 2.63
RBBP6-211	ENST00000568316	JARID2	Q92833	1246 aa	Predicted RBP	31.47	■■■□□ 2.63
RBBP6-211	ENST00000568316	CLUAP1	Q96AJ1	413 aa		31.47	■■■□□ 2.63
RBBP6-211	ENST00000568316	GCKR	Q14397	625 aa		31.46	■■■□□ 2.63
RBBP6-211	ENST00000568316	KIF13B	Q9NQT8	1826 aa		31.46	■■■□□ 2.63
RBBP6-211	ENST00000568316	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.45	■■■□□ 2.63
RBBP6-211	ENST00000568316	RNF123	Q5XPI4	1314 aa		31.45	■■■□□ 2.62
RBBP6-211	ENST00000568316	ANKRD31	Q8N7Z5	1873 aa		31.44	■■■□□ 2.62
RBBP6-211	ENST00000568316	SYT17	Q9BSW7	474 aa		31.44	■■■□□ 2.62
RBBP6-211	ENST00000568316	BRIP1	Q9BX63	1249 aa		31.44	■■■□□ 2.62
RBBP6-211	ENST00000568316	ABCC4	O15439	1325 aa		31.44	■■■□□ 2.62
RBBP6-211	ENST00000568316	ALDH1L1	O75891	902 aa		31.43	■■■□□ 2.62
RBBP6-211	ENST00000568316	PCCA	P05165	728 aa	Predicted RBP	31.43	■■■□□ 2.62
RBBP6-211	ENST00000568316	NLGN2	Q8NFZ4	835 aa		31.43	■■■□□ 2.62
RBBP6-211	ENST00000568316	PLIN1	O60240	522 aa		31.42	■■■□□ 2.62
RBBP6-211	ENST00000568316	HCLS1	P14317	486 aa	Predicted RBP	31.42	■■■□□ 2.62
RBBP6-211	ENST00000568316	TNRC6C	Q9HCJ0	1690 aa	Known RBP	31.41	■■■□□ 2.62
RBBP6-211	ENST00000568316	CCT4	P50991	539 aa	Known RBP	31.41	■■■□□ 2.62
RBBP6-211	ENST00000568316	UBE3B	Q7Z3V4	1068 aa		31.41	■■■□□ 2.62
RBBP6-211	ENST00000568316	CHRNA5	P30532	468 aa		31.4	■■■□□ 2.62
RBBP6-211	ENST00000568316	FTSJ3	Q8IY81	847 aa	Known RBP	31.4	■■■□□ 2.62
RBBP6-211	ENST00000568316	N4BP2	Q86UW6	1770 aa	Predicted RBP	31.39	■■■□□ 2.62
RBBP6-211	ENST00000568316	IRS4	O14654	1257 aa	Predicted RBP	31.39	■■■□□ 2.62
RBBP6-211	ENST00000568316	PDE6B	P35913	854 aa		31.39	■■■□□ 2.62
RBBP6-211	ENST00000568316	SLC10A5	Q5PT55	438 aa		31.39	■■■□□ 2.62
RBBP6-211	ENST00000568316		A0A0G2JLW4	131 aa		31.38	■■■□□ 2.61
RBBP6-211	ENST00000568316		H7C1W4	665 aa		31.38	■■■□□ 2.61
RBBP6-211	ENST00000568316	DPEP1	P16444	411 aa		31.38	■■■□□ 2.61
RBBP6-211	ENST00000568316	TGFB2	P61812	414 aa		31.38	■■■□□ 2.61
RBBP6-211	ENST00000568316	C3orf67	Q6ZVT6	689 aa		31.38	■■■□□ 2.61
RBBP6-211	ENST00000568316	C2CD5	Q86YS7	1000 aa		31.38	■■■□□ 2.61
RBBP6-211	ENST00000568316	DZIP1L	Q8IYY4	767 aa	Known RBP	31.38	■■■□□ 2.61
RBBP6-211	ENST00000568316	C9orf78	Q9NZ63	289 aa	Predicted RBP	31.38	■■■□□ 2.61
RBBP6-211	ENST00000568316	RIC1	Q4ADV7	1423 aa		31.38	■■■□□ 2.61
RBBP6-211	ENST00000568316	KIAA1551	Q9HCM1	1747 aa		31.38	■■■□□ 2.61
RBBP6-211	ENST00000568316	GRM8	O00222	908 aa		31.37	■■■□□ 2.61
RBBP6-211	ENST00000568316	RLBP1	P12271	317 aa		31.37	■■■□□ 2.61
RBBP6-211	ENST00000568316	INTS3	Q68E01	1043 aa	Known RBP	31.37	■■■□□ 2.61
RBBP6-211	ENST00000568316	TMEM57	Q8N5G2	664 aa		31.37	■■■□□ 2.61
RBBP6-211	ENST00000568316	DDX60	Q8IY21	1712 aa	Known RBP	31.36	■■■□□ 2.61
RBBP6-211	ENST00000568316	COL11A2	P13942	1736 aa	Predicted RBP	31.35	■■■□□ 2.61
RBBP6-211	ENST00000568316	CDHR2	Q9BYE9	1310 aa		31.35	■■■□□ 2.61
RBBP6-211	ENST00000568316	CASP7	P55210	303 aa		31.35	■■■□□ 2.61
RBBP6-211	ENST00000568316	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	31.35	■■■□□ 2.61
RBBP6-211	ENST00000568316	NLRP3	Q96P20	1036 aa		31.35	■■■□□ 2.61
RBBP6-211	ENST00000568316	WWC3	Q9ULE0	1092 aa		31.35	■■■□□ 2.61
RBBP6-211	ENST00000568316		H0YIN7	160 aa		31.34	■■■□□ 2.61
RBBP6-211	ENST00000568316	PANK1	Q8TE04	598 aa		31.34	■■■□□ 2.61
RBBP6-211	ENST00000568316	LAMB2	P55268	1798 aa		31.34	■■■□□ 2.61
RBBP6-211	ENST00000568316	KLRG2	A4D1S0	409 aa	Predicted RBP	31.32	■■■□□ 2.6
RBBP6-211	ENST00000568316	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.32	■■■□□ 2.6
RBBP6-211	ENST00000568316	USP44	Q9H0E7	712 aa		31.32	■■■□□ 2.6
RBBP6-211	ENST00000568316	SRGN	P10124	158 aa		31.31	■■■□□ 2.6
RBBP6-211	ENST00000568316	HSP90B1	P14625	803 aa	Known RBP	31.31	■■■□□ 2.6
RBBP6-211	ENST00000568316	KCNA3	P22001	575 aa		31.31	■■■□□ 2.6
RBBP6-211	ENST00000568316	PDE8A	O60658	829 aa		31.3	■■■□□ 2.6
RBBP6-211	ENST00000568316	MS4A1	P11836	297 aa		31.3	■■■□□ 2.6
RBBP6-211	ENST00000568316	RRP1	P56182	461 aa	Known RBP	31.3	■■■□□ 2.6
RBBP6-211	ENST00000568316	CRY2	Q49AN0	593 aa		31.3	■■■□□ 2.6
RBBP6-211	ENST00000568316	ITPRIP	Q8IWB1	547 aa		31.3	■■■□□ 2.6
RBBP6-211	ENST00000568316	ZNF622	Q969S3	477 aa	Known RBP eCLIP	31.3	■■■□□ 2.6	1e-6	■■■■□ 25.6
RBBP6-211	ENST00000568316	PDZRN3	Q9UPQ7	1066 aa		31.3	■■■□□ 2.6
RBBP6-211	ENST00000568316	UTY	O14607	1347 aa		31.29	■■■□□ 2.6
RBBP6-211	ENST00000568316	RPGR	Q92834	1020 aa	Known RBP	31.29	■■■□□ 2.6
RBBP6-211	ENST00000568316	C20orf194	Q5TEA3	1177 aa		31.28	■■■□□ 2.6
RBBP6-211	ENST00000568316	MEIS3	Q99687	375 aa		31.28	■■■□□ 2.6
RBBP6-211	ENST00000568316	DLEC1	Q9Y238	1755 aa		31.28	■■■□□ 2.6
RBBP6-211	ENST00000568316	NPR1	P16066	1061 aa		31.27	■■■□□ 2.6
RBBP6-211	ENST00000568316	MASTL	Q96GX5	879 aa		31.27	■■■□□ 2.6
RBBP6-211	ENST00000568316	SUCLG2	Q96I99	432 aa		31.27	■■■□□ 2.6
RBBP6-211	ENST00000568316	CCDC85A	Q96PX6	553 aa	Predicted RBP	31.27	■■■□□ 2.6
RBBP6-211	ENST00000568316	CTSW	P56202	376 aa		31.26	■■■□□ 2.59
RBBP6-211	ENST00000568316	STYK1	Q6J9G0	422 aa		31.26	■■■□□ 2.59
RBBP6-211	ENST00000568316	PLA2G12B	Q9BX93	195 aa		31.26	■■■□□ 2.59
RBBP6-211	ENST00000568316	PIM2	Q9P1W9	311 aa		31.26	■■■□□ 2.59
RBBP6-211	ENST00000568316	UBTFL1	P0CB47	393 aa	Predicted RBP	31.25	■■■□□ 2.59
RBBP6-211	ENST00000568316	SF3B3	Q15393	1217 aa	Known RBP	31.25	■■■□□ 2.59
RBBP6-211	ENST00000568316	EPHA10	Q5JZY3	1008 aa		31.24	■■■□□ 2.59
RBBP6-211	ENST00000568316	COG6	Q9Y2V7	657 aa		31.24	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms