RNA–Protein interactions for RNA: ENST00000568059.1

NEIL1-218, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 4

Gene NEIL1, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-218ENST00000568059 CRY2Q49AN0 593 aa20.87■□□□□ 0.93
NEIL1-218ENST00000568059 CCDC93Q567U6 631 aa20.87■□□□□ 0.93
NEIL1-218ENST00000568059 RPGRQ92834 1020 aaKnown RBP20.87■□□□□ 0.93
NEIL1-218ENST00000568059 UTP14AQ9BVJ6 771 aaKnown RBP20.87■□□□□ 0.93
NEIL1-218ENST00000568059 HYPKQ9NX55 129 aa20.87■□□□□ 0.93
NEIL1-218ENST00000568059 LAMB2P55268 1798 aa20.87■□□□□ 0.93
NEIL1-218ENST00000568059 ALDH1B1P30837 517 aa20.86■□□□□ 0.93
NEIL1-218ENST00000568059 WWC1Q8IX03 1113 aa20.86■□□□□ 0.93
NEIL1-218ENST00000568059 PLBD2Q8NHP8 589 aa20.86■□□□□ 0.93
NEIL1-218ENST00000568059 NMRK2Q9NPI5 230 aa20.86■□□□□ 0.93
NEIL1-218ENST00000568059 TCIRG1Q13488 830 aa20.85■□□□□ 0.93
NEIL1-218ENST00000568059 TSR2Q969E8 191 aaKnown RBP20.85■□□□□ 0.93
NEIL1-218ENST00000568059 NLRP10Q86W26 655 aa20.84■□□□□ 0.93
NEIL1-218ENST00000568059 NCBP3Q53F19 620 aaKnown RBP20.83■□□□□ 0.93
NEIL1-218ENST00000568059 ANKRD13DQ6ZTN6 518 aa20.83■□□□□ 0.93
NEIL1-218ENST00000568059 C8orf58Q8NAV2 365 aa20.83■□□□□ 0.93
NEIL1-218ENST00000568059 C7orf43Q8WVR3 580 aa20.83■□□□□ 0.93
NEIL1-218ENST00000568059 CHMP4AQ9BY43 222 aa20.83■□□□□ 0.93
NEIL1-218ENST00000568059 IL16Q14005 1332 aa20.82■□□□□ 0.92
NEIL1-218ENST00000568059 DDX60Q8IY21 1712 aaKnown RBP20.82■□□□□ 0.92
NEIL1-218ENST00000568059 GOLGA2Q08379 1002 aa20.82■□□□□ 0.92
NEIL1-218ENST00000568059 NLRP3Q96P20 1036 aa20.82■□□□□ 0.92
NEIL1-218ENST00000568059 SH3TC1Q8TE82 1336 aa20.81■□□□□ 0.92
NEIL1-218ENST00000568059 CCDC30Q5VVM6 783 aa20.81■□□□□ 0.92
NEIL1-218ENST00000568059 FAM9BQ8IZU0 186 aa20.81■□□□□ 0.92
NEIL1-218ENST00000568059 RBM17Q96I25 401 aaKnown RBP20.81■□□□□ 0.92
NEIL1-218ENST00000568059 TRMT112Q9UI30 125 aaKnown RBP20.81■□□□□ 0.92
NEIL1-218ENST00000568059 GLTPD2A6NH11 291 aa20.8■□□□□ 0.92
NEIL1-218ENST00000568059 HOXA10P31260 410 aaPredicted RBP20.8■□□□□ 0.92
NEIL1-218ENST00000568059 FKBP4Q02790 459 aaKnown RBP eCLIP20.8■□□□□ 0.92
NEIL1-218ENST00000568059 OLFM4Q6UX06 510 aa20.8■□□□□ 0.92
NEIL1-218ENST00000568059 C3orf67Q6ZVT6 689 aa20.8■□□□□ 0.92
NEIL1-218ENST00000568059 C16orf71Q8IYS4 520 aaPredicted RBP20.8■□□□□ 0.92
NEIL1-218ENST00000568059 RTKN2Q8IZC4 609 aa20.8■□□□□ 0.92
NEIL1-218ENST00000568059 TSPYL6Q8N831 410 aa20.8■□□□□ 0.92
NEIL1-218ENST00000568059 SALL2Q9Y467 1007 aaPredicted RBP20.8■□□□□ 0.92
NEIL1-218ENST00000568059 RIC3Q7Z5B4 369 aa20.79■□□□□ 0.92
NEIL1-218ENST00000568059 PHAXQ9H814 394 aaKnown RBP20.79■□□□□ 0.92
NEIL1-218ENST00000568059 WDR90Q96KV7 1748 aa20.78■□□□□ 0.92
NEIL1-218ENST00000568059 ATP5J2-PTCD1G3V325 749 aa20.78■□□□□ 0.92
NEIL1-218ENST00000568059 PPEF1O14829 653 aaPredicted RBP20.78■□□□□ 0.92
NEIL1-218ENST00000568059 TOMM70O94826 608 aa20.78■□□□□ 0.92
NEIL1-218ENST00000568059 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
NEIL1-218ENST00000568059 CRAMP1Q96RY5 1269 aa20.78■□□□□ 0.92
NEIL1-218ENST00000568059 ISCA1Q9BUE6 129 aa20.78■□□□□ 0.92
NEIL1-218ENST00000568059 SNED1Q8TER0 1413 aa20.78■□□□□ 0.92
NEIL1-218ENST00000568059 FANCIQ9NVI1 1328 aa20.78■□□□□ 0.92
NEIL1-218ENST00000568059 TWISTNBQ3B726 338 aaPredicted RBP20.77■□□□□ 0.92
NEIL1-218ENST00000568059 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
NEIL1-218ENST00000568059 STK31Q9BXU1 1019 aa20.77■□□□□ 0.92
NEIL1-218ENST00000568059 RRAGCQ9HB90 399 aa20.77■□□□□ 0.92
NEIL1-218ENST00000568059 DDX58O95786 925 aaKnown RBP20.76■□□□□ 0.91
NEIL1-218ENST00000568059 HCLS1P14317 486 aaPredicted RBP20.76■□□□□ 0.91
NEIL1-218ENST00000568059 CC2D2BQ6DHV5 1058 aa20.76■□□□□ 0.91
NEIL1-218ENST00000568059 DPY19L2Q6NUT2 758 aa20.76■□□□□ 0.91
NEIL1-218ENST00000568059 ZNF277Q9NRM2 450 aaPredicted RBP20.76■□□□□ 0.91
NEIL1-218ENST00000568059 ABCC4O15439 1325 aa20.76■□□□□ 0.91
NEIL1-218ENST00000568059 WDR63Q8IWG1 891 aa20.75■□□□□ 0.91
NEIL1-218ENST00000568059 SYNE4Q8N205 404 aa20.75■□□□□ 0.91
NEIL1-218ENST00000568059 RBM46Q8TBY0 533 aaKnown RBP20.74■□□□□ 0.91
NEIL1-218ENST00000568059 PSMD1Q99460 953 aa20.74■□□□□ 0.91
NEIL1-218ENST00000568059 TMX4Q9H1E5 349 aaPredicted RBP20.74■□□□□ 0.91
NEIL1-218ENST00000568059 TCERG1O14776 1098 aaKnown RBP20.73■□□□□ 0.91
NEIL1-218ENST00000568059 HSPA6P17066 643 aa20.73■□□□□ 0.91
NEIL1-218ENST00000568059 GRIPAP1Q4V328 841 aa20.73■□□□□ 0.91
NEIL1-218ENST00000568059 FAM89AQ96GI7 184 aa20.73■□□□□ 0.91
NEIL1-218ENST00000568059 MYD88Q99836 296 aa20.73■□□□□ 0.91
NEIL1-218ENST00000568059 VEGFAP15692 232 aaPredicted RBP20.72■□□□□ 0.91
NEIL1-218ENST00000568059 IARSP41252 1262 aaKnown RBP20.72■□□□□ 0.91
NEIL1-218ENST00000568059 TRIM28Q13263 835 aaKnown RBP20.72■□□□□ 0.91
NEIL1-218ENST00000568059 DDX46Q7L014 1031 aaKnown RBP20.72■□□□□ 0.91
NEIL1-218ENST00000568059 LRRC37AA6NMS7 1700 aa20.72■□□□□ 0.91
NEIL1-218ENST00000568059 TAF1P21675 1872 aa20.71■□□□□ 0.91
NEIL1-218ENST00000568059 RTL5Q5HYW3 569 aaPredicted RBP20.71■□□□□ 0.91
NEIL1-218ENST00000568059 CACNA1FO60840 1977 aa20.71■□□□□ 0.91
NEIL1-218ENST00000568059 SLC51AQ86UW1 340 aa20.7■□□□□ 0.9
NEIL1-218ENST00000568059 METTL22Q9BUU2 404 aaPredicted RBP20.7■□□□□ 0.9
NEIL1-218ENST00000568059 MAP3K2Q9Y2U5 619 aa20.7■□□□□ 0.9
NEIL1-218ENST00000568059 ATP6V0A2Q9Y487 856 aa20.7■□□□□ 0.9
NEIL1-218ENST00000568059 IRS4O14654 1257 aaPredicted RBP20.69■□□□□ 0.9
NEIL1-218ENST00000568059 GRAPQ13588 217 aa20.69■□□□□ 0.9
NEIL1-218ENST00000568059 GRAPLQ8TC17 118 aaPredicted RBP20.69■□□□□ 0.9
NEIL1-218ENST00000568059 MYH16Q9H6N6 1097 aa20.69■□□□□ 0.9
NEIL1-218ENST00000568059 ZNF541Q9H0D2 1346 aa20.69■□□□□ 0.9
NEIL1-218ENST00000568059 COL4A5P29400 1685 aa20.68■□□□□ 0.9
NEIL1-218ENST00000568059 DDNO94850 711 aaPredicted RBP20.68■□□□□ 0.9
NEIL1-218ENST00000568059 KSR2Q6VAB6 950 aa20.68■□□□□ 0.9
NEIL1-218ENST00000568059 ZBTB38Q8NAP3 1195 aaPredicted RBP20.68■□□□□ 0.9
NEIL1-218ENST00000568059 CCDC191Q8NCU4 936 aa20.68■□□□□ 0.9
NEIL1-218ENST00000568059 JDP2Q8WYK2 163 aa20.68■□□□□ 0.9
NEIL1-218ENST00000568059 CWC25Q9NXE8 425 aaPredicted RBP20.68■□□□□ 0.9
NEIL1-218ENST00000568059 SCN4AP35499 1836 aa20.68■□□□□ 0.9
NEIL1-218ENST00000568059 PI4KAP2A4QPH2 592 aa20.67■□□□□ 0.9
NEIL1-218ENST00000568059 BBOX1O75936 387 aa20.67■□□□□ 0.9
NEIL1-218ENST00000568059 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
NEIL1-218ENST00000568059 HSP90B1P14625 803 aaKnown RBP20.67■□□□□ 0.9
NEIL1-218ENST00000568059 EXOSC9Q06265 439 aaKnown RBP20.67■□□□□ 0.9
NEIL1-218ENST00000568059 FSTL1Q12841 308 aa20.67■□□□□ 0.9
NEIL1-218ENST00000568059 PI4KAP1Q8N8J0 262 aa20.67■□□□□ 0.9
NEIL1-218ENST00000568059 SMC1BQ8NDV3 1235 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms