RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 MAGEB6P1A0A0J9YX57 407 aa10.5□□□□□ -0.73
SMG1-214ENST00000568038 MPNDQ8N594 471 aa10.5□□□□□ -0.73
SMG1-214ENST00000568038 LRRC59Q96AG4 307 aaKnown RBP10.5□□□□□ -0.73
SMG1-214ENST00000568038 NRKQ7Z2Y5 1582 aa10.5□□□□□ -0.73
SMG1-214ENST00000568038 NHSL1Q5SYE7 1610 aa10.5□□□□□ -0.73
SMG1-214ENST00000568038 AHDC1Q5TGY3 1603 aaPredicted RBP10.5□□□□□ -0.73
SMG1-214ENST00000568038 TRPM3Q9HCF6 1732 aaPredicted RBP10.5□□□□□ -0.73
SMG1-214ENST00000568038 AP1G2O75843 785 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 ADH1CP00326 375 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 TNNT2P45379 298 aaPredicted RBP10.49□□□□□ -0.73
SMG1-214ENST00000568038 WDR4P57081 412 aaKnown RBP10.49□□□□□ -0.73
SMG1-214ENST00000568038 NEUROD2Q15784 382 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 NBPF14Q5TI25 921 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 TREML4Q6UXN2 200 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 TRIM46Q7Z4K8 759 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 MORC1Q86VD1 984 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 NLRP13Q86W25 1043 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 KIFC2Q96AC6 838 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 COG3Q96JB2 828 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 PHLPP1O60346 1717 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 TNS3Q68CZ2 1445 aa10.49□□□□□ -0.73
SMG1-214ENST00000568038 ANP32CO43423 234 aa10.48□□□□□ -0.73
SMG1-214ENST00000568038 HSPA1LP34931 641 aa10.48□□□□□ -0.73
SMG1-214ENST00000568038 NSD2O96028 1365 aa10.48□□□□□ -0.73
SMG1-214ENST00000568038 FBLN1P23142 703 aa10.47□□□□□ -0.73
SMG1-214ENST00000568038 FBXO41Q8TF61 875 aa10.47□□□□□ -0.73
SMG1-214ENST00000568038 CDK15Q96Q40 435 aa10.47□□□□□ -0.73
SMG1-214ENST00000568038 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMG1-214ENST00000568038 ARHGEF10O15013 1369 aa10.47□□□□□ -0.73
SMG1-214ENST00000568038 NPC1L1Q9UHC9 1359 aa10.47□□□□□ -0.73
SMG1-214ENST00000568038 PIK3C2AO00443 1686 aa10.47□□□□□ -0.73
SMG1-214ENST00000568038 KIF20BQ96Q89 1820 aa10.47□□□□□ -0.73
SMG1-214ENST00000568038 NR6A1Q15406 480 aa10.46□□□□□ -0.73
SMG1-214ENST00000568038 PRKRIP1Q9H875 184 aaPredicted RBP10.46□□□□□ -0.73
SMG1-214ENST00000568038 USP31Q70CQ4 1352 aa10.46□□□□□ -0.74
SMG1-214ENST00000568038 COL16A1Q07092 1604 aaPredicted RBP10.46□□□□□ -0.74
SMG1-214ENST00000568038 ALS2Q96Q42 1657 aa10.46□□□□□ -0.74
SMG1-214ENST00000568038 OVOS2A0A0J9YW53 1432 aa10.45□□□□□ -0.74
SMG1-214ENST00000568038 OVOS2Q6IE36 1432 aa10.45□□□□□ -0.74
SMG1-214ENST00000568038 PNPLA6Q8IY17 1366 aa10.45□□□□□ -0.74
SMG1-214ENST00000568038 TIMP2P16035 220 aa10.45□□□□□ -0.74
SMG1-214ENST00000568038 IL27Q8NEV9 243 aa10.45□□□□□ -0.74
SMG1-214ENST00000568038 ZBTB7CA1YPR0 619 aa10.44□□□□□ -0.74
SMG1-214ENST00000568038 WFS1O76024 890 aa10.44□□□□□ -0.74
SMG1-214ENST00000568038 ZIC2O95409 532 aaPredicted RBP10.44□□□□□ -0.74
SMG1-214ENST00000568038 GCP02774 474 aa10.44□□□□□ -0.74
SMG1-214ENST00000568038 GRM5P41594 1212 aa10.44□□□□□ -0.74
SMG1-214ENST00000568038 RALBP1Q15311 655 aa10.44□□□□□ -0.74
SMG1-214ENST00000568038 PPP2R2DQ66LE6 453 aa10.44□□□□□ -0.74
SMG1-214ENST00000568038 SH3BP5LQ7L8J4 393 aa10.44□□□□□ -0.74
SMG1-214ENST00000568038 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
SMG1-214ENST00000568038 PARD3Q8TEW0 1356 aa10.43□□□□□ -0.74
SMG1-214ENST00000568038 USP19O94966 1318 aa10.43□□□□□ -0.74
SMG1-214ENST00000568038 NR3C2P08235 984 aa10.43□□□□□ -0.74
SMG1-214ENST00000568038 ZC3H6P61129 1189 aaKnown RBP10.43□□□□□ -0.74
SMG1-214ENST00000568038 NR5A1Q13285 461 aa10.43□□□□□ -0.74
SMG1-214ENST00000568038 RRS1Q15050 365 aaKnown RBP10.43□□□□□ -0.74
SMG1-214ENST00000568038 VASH1Q7L8A9 365 aaPredicted RBP10.43□□□□□ -0.74
SMG1-214ENST00000568038 SH3RF1Q7Z6J0 888 aa10.43□□□□□ -0.74
SMG1-214ENST00000568038 ZFP42Q96MM3 310 aa10.43□□□□□ -0.74
SMG1-214ENST00000568038 JCADQ9P266 1359 aa10.42□□□□□ -0.74
SMG1-214ENST00000568038 ANKRD26Q9UPS8 1709 aa10.42□□□□□ -0.74
SMG1-214ENST00000568038 PPM1GO15355 546 aaPredicted RBP10.42□□□□□ -0.74
SMG1-214ENST00000568038 PRKCSHP14314 528 aaPredicted RBP10.42□□□□□ -0.74
SMG1-214ENST00000568038 PPP2R1AP30153 589 aa10.42□□□□□ -0.74
SMG1-214ENST00000568038 KCNH5Q8NCM2 988 aa10.42□□□□□ -0.74
SMG1-214ENST00000568038 PURBQ96QR8 312 aaKnown RBP10.42□□□□□ -0.74
SMG1-214ENST00000568038 ARHGAP9Q9BRR9 750 aa10.42□□□□□ -0.74
SMG1-214ENST00000568038 FKBPLQ9UIM3 349 aa10.42□□□□□ -0.74
SMG1-214ENST00000568038 MED1Q15648 1581 aaPredicted RBP10.42□□□□□ -0.74
SMG1-214ENST00000568038 MARF1Q9Y4F3 1742 aaKnown RBP10.41□□□□□ -0.74
SMG1-214ENST00000568038 MYBBP1AQ9BQG0 1328 aaKnown RBP10.41□□□□□ -0.74
SMG1-214ENST00000568038 FSHRP23945 695 aa10.41□□□□□ -0.74
SMG1-214ENST00000568038 MTHFSP49914 203 aa10.41□□□□□ -0.74
SMG1-214ENST00000568038 SCARF1Q14162 830 aa10.41□□□□□ -0.74
SMG1-214ENST00000568038 MRPL14Q6P1L8 145 aaKnown RBP10.41□□□□□ -0.74
SMG1-214ENST00000568038 ITPKCQ96DU7 683 aa10.41□□□□□ -0.74
SMG1-214ENST00000568038 PCMTD1Q96MG8 357 aaPredicted RBP10.41□□□□□ -0.74
SMG1-214ENST00000568038 C1QTNF2Q9BXJ5 285 aa10.41□□□□□ -0.74
SMG1-214ENST00000568038 POLKQ9UBT6 870 aa10.41□□□□□ -0.74
SMG1-214ENST00000568038 EMILIN1Q9Y6C2 1016 aa10.41□□□□□ -0.74
SMG1-214ENST00000568038 MAP3K19Q56UN5 1328 aa10.4□□□□□ -0.74
SMG1-214ENST00000568038 SLIT3O75094 1523 aa10.4□□□□□ -0.74
SMG1-214ENST00000568038 TERTO14746 1132 aaKnown RBP10.4□□□□□ -0.74
SMG1-214ENST00000568038 AMPHP49418 695 aa10.4□□□□□ -0.74
SMG1-214ENST00000568038 ZBTB33Q86T24 672 aa10.4□□□□□ -0.74
SMG1-214ENST00000568038 GPKOWQ92917 476 aaPredicted RBP eCLIP10.4□□□□□ -0.74
SMG1-214ENST00000568038 KLF16Q9BXK1 252 aaPredicted RBP10.4□□□□□ -0.74
SMG1-214ENST00000568038 USP54Q70EL1 1684 aa10.4□□□□□ -0.74
SMG1-214ENST00000568038 AATKQ6ZMQ8 1374 aa10.39□□□□□ -0.75
SMG1-214ENST00000568038 ADAMTS2O95450 1211 aa10.39□□□□□ -0.75
SMG1-214ENST00000568038 RFC5P40937 340 aa10.39□□□□□ -0.75
SMG1-214ENST00000568038 NFX1Q12986 1120 aaKnown RBP10.39□□□□□ -0.75
SMG1-214ENST00000568038 CHRNA2Q15822 529 aa10.39□□□□□ -0.75
SMG1-214ENST00000568038 ERFEQ4G0M1 354 aa10.39□□□□□ -0.75
SMG1-214ENST00000568038 C6orf118Q5T5N4 469 aa10.39□□□□□ -0.75
SMG1-214ENST00000568038 PDXDC2PQ6P474 469 aa10.39□□□□□ -0.75
SMG1-214ENST00000568038 ARHGEF25Q86VW2 580 aa10.39□□□□□ -0.75
SMG1-214ENST00000568038 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
SMG1-214ENST00000568038 PRDM11Q9NQV5 511 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms