RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 KSR2Q6VAB6 950 aa13.77□□□□□ -0.21
NSMCE1-213ENST00000567710 PI4KAP1Q8N8J0 262 aa13.77□□□□□ -0.21
NSMCE1-213ENST00000567710 MAP3K2Q9Y2U5 619 aa13.77□□□□□ -0.21
NSMCE1-213ENST00000567710 COL11A2P13942 1736 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 RIC1Q4ADV7 1423 aa13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 RNF123Q5XPI4 1314 aa13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 KLRG2A4D1S0 409 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 SRGNP10124 158 aa13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 TRIM28Q13263 835 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 FKBP5Q13451 457 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 DALRD3Q5D0E6 543 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 ZNF428Q96B54 188 aa13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 MYD88Q99836 296 aa13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 METTL22Q9BUU2 404 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 TRMT112Q9UI30 125 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
NSMCE1-213ENST00000567710 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
NSMCE1-213ENST00000567710 ZBED9Q6R2W3 1325 aa13.75□□□□□ -0.21
NSMCE1-213ENST00000567710 TTLL6Q8N841 843 aa13.75□□□□□ -0.21
NSMCE1-213ENST00000567710 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
NSMCE1-213ENST00000567710 SH3TC1Q8TE82 1336 aa13.74□□□□□ -0.21
NSMCE1-213ENST00000567710 STYK1Q6J9G0 422 aa13.74□□□□□ -0.21
NSMCE1-213ENST00000567710 SYNE4Q8N205 404 aa13.74□□□□□ -0.21
NSMCE1-213ENST00000567710 MASTLQ96GX5 879 aa13.74□□□□□ -0.21
NSMCE1-213ENST00000567710 CACNA1FO60840 1977 aa13.74□□□□□ -0.21
NSMCE1-213ENST00000567710 IGKV5-2P06315 115 aa13.73□□□□□ -0.21
NSMCE1-213ENST00000567710 CT47B1P0C2W7 299 aaPredicted RBP13.73□□□□□ -0.21
NSMCE1-213ENST00000567710 NPR1P16066 1061 aa13.73□□□□□ -0.21
NSMCE1-213ENST00000567710 CRY2Q49AN0 593 aa13.73□□□□□ -0.21
NSMCE1-213ENST00000567710 SLC10A5Q5PT55 438 aa13.73□□□□□ -0.21
NSMCE1-213ENST00000567710 C3orf67Q6ZVT6 689 aa13.73□□□□□ -0.21
NSMCE1-213ENST00000567710 MRPL50Q8N5N7 158 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-213ENST00000567710 CCDC191Q8NCU4 936 aa13.73□□□□□ -0.21
NSMCE1-213ENST00000567710 DNAAF4Q8WXU2 420 aa13.73□□□□□ -0.21
NSMCE1-213ENST00000567710 SSH1Q8WYL5 1049 aa13.73□□□□□ -0.21
NSMCE1-213ENST00000567710 HCLS1P14317 486 aaPredicted RBP13.72□□□□□ -0.21
NSMCE1-213ENST00000567710 NEXNQ0ZGT2 675 aa13.72□□□□□ -0.21
NSMCE1-213ENST00000567710 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
NSMCE1-213ENST00000567710 FAM89AQ96GI7 184 aa13.72□□□□□ -0.21
NSMCE1-213ENST00000567710 BCL2L13Q9BXK5 485 aa13.72□□□□□ -0.21
NSMCE1-213ENST00000567710 CWC25Q9NXE8 425 aaPredicted RBP13.72□□□□□ -0.21
NSMCE1-213ENST00000567710 ARFGEF1Q9Y6D6 1849 aa13.71□□□□□ -0.21
NSMCE1-213ENST00000567710 F6X3S4 739 aa13.71□□□□□ -0.21
NSMCE1-213ENST00000567710 CWF19L2Q2TBE0 894 aaKnown RBP13.71□□□□□ -0.21
NSMCE1-213ENST00000567710 ALDH1L2Q3SY69 923 aa13.71□□□□□ -0.21
NSMCE1-213ENST00000567710 RTL5Q5HYW3 569 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-213ENST00000567710 PRPF40BQ6NWY9 871 aaKnown RBP13.71□□□□□ -0.21
NSMCE1-213ENST00000567710 ZBTB38Q8NAP3 1195 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-213ENST00000567710 NLRP3Q96P20 1036 aa13.71□□□□□ -0.21
NSMCE1-213ENST00000567710 NEURL1BA8MQ27 555 aa13.7□□□□□ -0.22
NSMCE1-213ENST00000567710 PCCAP05165 728 aaPredicted RBP13.7□□□□□ -0.22
NSMCE1-213ENST00000567710 RPGRQ92834 1020 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-213ENST00000567710 SMC4Q9NTJ3 1288 aa13.7□□□□□ -0.22
NSMCE1-213ENST00000567710 IRS4O14654 1257 aaPredicted RBP13.69□□□□□ -0.22
NSMCE1-213ENST00000567710 ALDH1B1P30837 517 aa13.69□□□□□ -0.22
NSMCE1-213ENST00000567710 HOXA10P31260 410 aaPredicted RBP13.69□□□□□ -0.22
NSMCE1-213ENST00000567710 ARHGAP27Q6ZUM4 889 aa13.69□□□□□ -0.22
NSMCE1-213ENST00000567710 LINS1Q8NG48 757 aa13.69□□□□□ -0.22
NSMCE1-213ENST00000567710 PTPRCP08575 1304 aa13.68□□□□□ -0.22
NSMCE1-213ENST00000567710 C21orf2O43822 256 aa13.68□□□□□ -0.22
NSMCE1-213ENST00000567710 YY1P25490 414 aa13.68□□□□□ -0.22
NSMCE1-213ENST00000567710 RARSP54136 660 aaKnown RBP13.68□□□□□ -0.22
NSMCE1-213ENST00000567710 BEND3Q5T5X7 828 aa13.68□□□□□ -0.22
NSMCE1-213ENST00000567710 JARID2Q92833 1246 aaPredicted RBP13.68□□□□□ -0.22
NSMCE1-213ENST00000567710 RBM17Q96I25 401 aaKnown RBP13.68□□□□□ -0.22
NSMCE1-213ENST00000567710 ZNF219Q9P2Y4 722 aaPredicted RBP13.68□□□□□ -0.22
NSMCE1-213ENST00000567710 SLX4Q8IY92 1834 aa13.68□□□□□ -0.22
NSMCE1-213ENST00000567710 DDX60Q8IY21 1712 aaKnown RBP13.67□□□□□ -0.22
NSMCE1-213ENST00000567710 GCKRQ14397 625 aa13.67□□□□□ -0.22
NSMCE1-213ENST00000567710 C7orf43Q8WVR3 580 aa13.67□□□□□ -0.22
NSMCE1-213ENST00000567710 CRAMP1Q96RY5 1269 aa13.67□□□□□ -0.22
NSMCE1-213ENST00000567710 ABCC4O15439 1325 aa13.66□□□□□ -0.22
NSMCE1-213ENST00000567710 CDHR2Q9BYE9 1310 aa13.66□□□□□ -0.22
NSMCE1-213ENST00000567710 CHD4Q14839 1912 aa13.66□□□□□ -0.22
NSMCE1-213ENST00000567710 LAMB2P55268 1798 aa13.66□□□□□ -0.22
NSMCE1-213ENST00000567710 CACNA1SQ13698 1873 aa13.66□□□□□ -0.22
NSMCE1-213ENST00000567710 HSP90B1P14625 803 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-213ENST00000567710 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-213ENST00000567710 SLC4A10Q6U841 1118 aa13.66□□□□□ -0.22
NSMCE1-213ENST00000567710 H7C1W4 665 aa13.65□□□□□ -0.22
NSMCE1-213ENST00000567710 NFKBIEO00221 500 aa13.65□□□□□ -0.22
NSMCE1-213ENST00000567710 PDE8AO60658 829 aa13.65□□□□□ -0.22
NSMCE1-213ENST00000567710 RASSF7Q02833 373 aa13.65□□□□□ -0.22
NSMCE1-213ENST00000567710 SF3B3Q15393 1217 aaKnown RBP13.65□□□□□ -0.22
NSMCE1-213ENST00000567710 SOGA3Q5TF21 947 aa13.65□□□□□ -0.22
NSMCE1-213ENST00000567710 OLFM4Q6UX06 510 aa13.65□□□□□ -0.22
NSMCE1-213ENST00000567710 DDX46Q7L014 1031 aaKnown RBP13.65□□□□□ -0.22
NSMCE1-213ENST00000567710 UBE3BQ7Z3V4 1068 aa13.65□□□□□ -0.22
NSMCE1-213ENST00000567710 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-213ENST00000567710 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
NSMCE1-213ENST00000567710 CASP7P55210 303 aa13.64□□□□□ -0.23
NSMCE1-213ENST00000567710 GRAPQ13588 217 aa13.64□□□□□ -0.23
NSMCE1-213ENST00000567710 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
NSMCE1-213ENST00000567710 GRAPLQ8TC17 118 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-213ENST00000567710 SRCIN1Q9C0H9 1055 aa13.64□□□□□ -0.23
NSMCE1-213ENST00000567710 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-213ENST00000567710 CTSWP56202 376 aa13.63□□□□□ -0.23
NSMCE1-213ENST00000567710 SLC51AQ86UW1 340 aa13.63□□□□□ -0.23
NSMCE1-213ENST00000567710 KIF16BQ96L93 1317 aa13.63□□□□□ -0.23
NSMCE1-213ENST00000567710 BCAR3O75815 825 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms