RNA–Protein interactions for RNA: ENST00000567393.5

NEIL1-213, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 1,221 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-213ENST00000567393 FLIIQ13045 1269 aa17.04■□□□□ 0.32
NEIL1-213ENST00000567393 KSR2Q6VAB6 950 aa17.04■□□□□ 0.32
NEIL1-213ENST00000567393 TRMT112Q9UI30 125 aaKnown RBP17.04■□□□□ 0.32
NEIL1-213ENST00000567393 ANKRD31Q8N7Z5 1873 aa17.03■□□□□ 0.32
NEIL1-213ENST00000567393 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
NEIL1-213ENST00000567393 CRY2Q49AN0 593 aa17.03■□□□□ 0.32
NEIL1-213ENST00000567393 SLC10A5Q5PT55 438 aa17.03■□□□□ 0.32
NEIL1-213ENST00000567393 ZNF428Q96B54 188 aa17.03■□□□□ 0.32
NEIL1-213ENST00000567393 CDCA7LQ96GN5 454 aa17.03■□□□□ 0.32
NEIL1-213ENST00000567393 METTL22Q9BUU2 404 aaPredicted RBP17.03■□□□□ 0.32
NEIL1-213ENST00000567393 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
NEIL1-213ENST00000567393 DLEC1Q9Y238 1755 aa17.02■□□□□ 0.32
NEIL1-213ENST00000567393 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.32
NEIL1-213ENST00000567393 PI4KAP2A4QPH2 592 aa17.02■□□□□ 0.32
NEIL1-213ENST00000567393 HNRNPUQ00839 825 aaKnown RBP eCLIP17.02■□□□□ 0.32
NEIL1-213ENST00000567393 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
NEIL1-213ENST00000567393 ARHGAP27Q6ZUM4 889 aa17.02■□□□□ 0.32
NEIL1-213ENST00000567393 G2E3Q7L622 706 aa17.02■□□□□ 0.32
NEIL1-213ENST00000567393 TRMT2AQ8IZ69 625 aaKnown RBP17.02■□□□□ 0.32
NEIL1-213ENST00000567393 PI4KAP1Q8N8J0 262 aa17.02■□□□□ 0.32
NEIL1-213ENST00000567393 MYD88Q99836 296 aa17.02■□□□□ 0.32
NEIL1-213ENST00000567393 ANKRD36CQ5JPF3 1778 aa17.02■□□□□ 0.31
NEIL1-213ENST00000567393 ADCY9O60503 1353 aa17.02■□□□□ 0.31
NEIL1-213ENST00000567393 NEXNQ0ZGT2 675 aa17.01■□□□□ 0.31
NEIL1-213ENST00000567393 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
NEIL1-213ENST00000567393 CCDC191Q8NCU4 936 aa17.01■□□□□ 0.31
NEIL1-213ENST00000567393 RPGRQ92834 1020 aaKnown RBP17.01■□□□□ 0.31
NEIL1-213ENST00000567393 NLRP3Q96P20 1036 aa17.01■□□□□ 0.31
NEIL1-213ENST00000567393 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
NEIL1-213ENST00000567393 CT47B1P0C2W7 299 aaPredicted RBP17■□□□□ 0.31
NEIL1-213ENST00000567393 ALDH1B1P30837 517 aa17■□□□□ 0.31
NEIL1-213ENST00000567393 SOGA3Q5TF21 947 aa17■□□□□ 0.31
NEIL1-213ENST00000567393 CWC25Q9NXE8 425 aaPredicted RBP17■□□□□ 0.31
NEIL1-213ENST00000567393 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
NEIL1-213ENST00000567393 HSP90B1P14625 803 aaKnown RBP16.99■□□□□ 0.31
NEIL1-213ENST00000567393 HOXA10P31260 410 aaPredicted RBP16.99■□□□□ 0.31
NEIL1-213ENST00000567393 TNRC6CQ9HCJ0 1690 aaKnown RBP16.99■□□□□ 0.31
NEIL1-213ENST00000567393 ZBTB38Q8NAP3 1195 aaPredicted RBP16.98■□□□□ 0.31
NEIL1-213ENST00000567393 DNAAF4Q8WXU2 420 aa16.98■□□□□ 0.31
NEIL1-213ENST00000567393 RBM17Q96I25 401 aaKnown RBP16.98■□□□□ 0.31
NEIL1-213ENST00000567393 C21orf2O43822 256 aa16.97■□□□□ 0.31
NEIL1-213ENST00000567393 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
NEIL1-213ENST00000567393 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
NEIL1-213ENST00000567393 C3orf67Q6ZVT6 689 aa16.97■□□□□ 0.31
NEIL1-213ENST00000567393 SYNE4Q8N205 404 aa16.97■□□□□ 0.31
NEIL1-213ENST00000567393 FAM89AQ96GI7 184 aa16.97■□□□□ 0.31
NEIL1-213ENST00000567393 CRAMP1Q96RY5 1269 aa16.97■□□□□ 0.31
NEIL1-213ENST00000567393 ARFGEF1Q9Y6D6 1849 aa16.97■□□□□ 0.31
NEIL1-213ENST00000567393 IRS4O14654 1257 aaPredicted RBP16.96■□□□□ 0.31
NEIL1-213ENST00000567393 IGKV5-2P06315 115 aa16.96■□□□□ 0.31
NEIL1-213ENST00000567393 ALDH1L2Q3SY69 923 aa16.96■□□□□ 0.31
NEIL1-213ENST00000567393 NEURL1BA8MQ27 555 aa16.95■□□□□ 0.3
NEIL1-213ENST00000567393 CCDC93Q567U6 631 aa16.95■□□□□ 0.3
NEIL1-213ENST00000567393 LINS1Q8NG48 757 aa16.95■□□□□ 0.3
NEIL1-213ENST00000567393 ZNF219Q9P2Y4 722 aaPredicted RBP16.95■□□□□ 0.3
NEIL1-213ENST00000567393 ZBED9Q6R2W3 1325 aa16.95■□□□□ 0.3
NEIL1-213ENST00000567393 CWF19L2Q2TBE0 894 aaKnown RBP16.94■□□□□ 0.3
NEIL1-213ENST00000567393 MRPL50Q8N5N7 158 aaKnown RBP16.94■□□□□ 0.3
NEIL1-213ENST00000567393 C7orf43Q8WVR3 580 aa16.94■□□□□ 0.3
NEIL1-213ENST00000567393 SSH1Q8WYL5 1049 aa16.94■□□□□ 0.3
NEIL1-213ENST00000567393 PTPRCP08575 1304 aa16.94■□□□□ 0.3
NEIL1-213ENST00000567393 CDHR2Q9BYE9 1310 aa16.94■□□□□ 0.3
NEIL1-213ENST00000567393 NFKBIEO00221 500 aa16.93■□□□□ 0.3
NEIL1-213ENST00000567393 SF3B3Q15393 1217 aaKnown RBP16.93■□□□□ 0.3
NEIL1-213ENST00000567393 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
NEIL1-213ENST00000567393 CC2D2BQ6DHV5 1058 aa16.93■□□□□ 0.3
NEIL1-213ENST00000567393 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
NEIL1-213ENST00000567393 LTBP3Q9NS15 1303 aa16.93■□□□□ 0.3
NEIL1-213ENST00000567393 F6X3S4 739 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 PPEF1O14829 653 aaPredicted RBP16.92■□□□□ 0.3
NEIL1-213ENST00000567393 LMNB1P20700 586 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 RASSF7Q02833 373 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 GCKRQ14397 625 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 GRIPAP1Q4V328 841 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 C9orf131Q5VYM1 1079 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 RTKN2Q8IZC4 609 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 TAOK3Q9H2K8 898 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 SMC4Q9NTJ3 1288 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 RNF181Q9P0P0 153 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 ABCC4O15439 1325 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 CHD4Q14839 1912 aa16.92■□□□□ 0.3
NEIL1-213ENST00000567393 PDE8AO60658 829 aa16.91■□□□□ 0.3
NEIL1-213ENST00000567393 BBOX1O75936 387 aa16.91■□□□□ 0.3
NEIL1-213ENST00000567393 BEND3Q5T5X7 828 aa16.91■□□□□ 0.3
NEIL1-213ENST00000567393 ZNF784Q8NCA9 323 aaPredicted RBP16.91■□□□□ 0.3
NEIL1-213ENST00000567393 TMX4Q9H1E5 349 aaPredicted RBP16.91■□□□□ 0.3
NEIL1-213ENST00000567393 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
NEIL1-213ENST00000567393 H7C1W4 665 aa16.9■□□□□ 0.3
NEIL1-213ENST00000567393 GRAPQ13588 217 aa16.9■□□□□ 0.3
NEIL1-213ENST00000567393 TMC4Q7Z404 712 aa16.9■□□□□ 0.3
NEIL1-213ENST00000567393 GRAPLQ8TC17 118 aaPredicted RBP16.9■□□□□ 0.3
NEIL1-213ENST00000567393 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
NEIL1-213ENST00000567393 SLX4Q8IY92 1834 aa16.89■□□□□ 0.29
NEIL1-213ENST00000567393 ALDH1L1O75891 902 aa16.89■□□□□ 0.29
NEIL1-213ENST00000567393 BRPF1P55201 1214 aaPredicted RBP16.89■□□□□ 0.29
NEIL1-213ENST00000567393 FKBP4Q02790 459 aaKnown RBP eCLIP16.89■□□□□ 0.29
NEIL1-213ENST00000567393 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
NEIL1-213ENST00000567393 UBE3BQ7Z3V4 1068 aa16.89■□□□□ 0.29
NEIL1-213ENST00000567393 ATP6V0A2Q9Y487 856 aa16.89■□□□□ 0.29
NEIL1-213ENST00000567393 CACNA1FO60840 1977 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms