RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 CEP350Q5VT06 3117 aa21.51■■□□□ 1.03
PKD1-233ENST00000567355 RNF123Q5XPI4 1314 aa21.51■■□□□ 1.03
PKD1-233ENST00000567355 SNED1Q8TER0 1413 aa21.5■■□□□ 1.03
PKD1-233ENST00000567355 HOXA10P31260 410 aaPredicted RBP21.5■■□□□ 1.03
PKD1-233ENST00000567355 TCIRG1Q13488 830 aa21.5■■□□□ 1.03
PKD1-233ENST00000567355 SLC10A5Q5PT55 438 aa21.5■■□□□ 1.03
PKD1-233ENST00000567355 NLRP10Q86W26 655 aa21.5■■□□□ 1.03
PKD1-233ENST00000567355 HYPKQ9NX55 129 aa21.5■■□□□ 1.03
PKD1-233ENST00000567355 ALDH1B1P30837 517 aa21.49■■□□□ 1.03
PKD1-233ENST00000567355 PLBD2Q8NHP8 589 aa21.49■■□□□ 1.03
PKD1-233ENST00000567355 UTP14AQ9BVJ6 771 aaKnown RBP21.49■■□□□ 1.03
PKD1-233ENST00000567355 NMRK2Q9NPI5 230 aa21.49■■□□□ 1.03
PKD1-233ENST00000567355 ANKRD13DQ6ZTN6 518 aa21.48■■□□□ 1.03
PKD1-233ENST00000567355 C3orf67Q6ZVT6 689 aa21.48■■□□□ 1.03
PKD1-233ENST00000567355 TAOK3Q9H2K8 898 aa21.48■■□□□ 1.03
PKD1-233ENST00000567355 IL16Q14005 1332 aa21.48■■□□□ 1.03
PKD1-233ENST00000567355 KDM2BQ8NHM5 1336 aa21.47■■□□□ 1.03
PKD1-233ENST00000567355 SENP3-EIF4A1A0A087X0R7 540 aa21.46■■□□□ 1.03
PKD1-233ENST00000567355 ELL2O00472 640 aaPredicted RBP21.46■■□□□ 1.03
PKD1-233ENST00000567355 CCDC93Q567U6 631 aa21.46■■□□□ 1.03
PKD1-233ENST00000567355 ISCA1Q9BUE6 129 aa21.46■■□□□ 1.03
PKD1-233ENST00000567355 OLFM4Q6UX06 510 aa21.45■■□□□ 1.02
PKD1-233ENST00000567355 TSPYL6Q8N831 410 aa21.45■■□□□ 1.02
PKD1-233ENST00000567355 TSR2Q969E8 191 aaKnown RBP21.45■■□□□ 1.02
PKD1-233ENST00000567355 CRAMP1Q96RY5 1269 aa21.45■■□□□ 1.02
PKD1-233ENST00000567355 LAMB2P55268 1798 aa21.45■■□□□ 1.02
PKD1-233ENST00000567355 GLTPD2A6NH11 291 aa21.44■■□□□ 1.02
PKD1-233ENST00000567355 PHAXQ9H814 394 aaKnown RBP21.44■■□□□ 1.02
PKD1-233ENST00000567355 TOMM70O94826 608 aa21.43■■□□□ 1.02
PKD1-233ENST00000567355 FKBP4Q02790 459 aaKnown RBP eCLIP21.43■■□□□ 1.02
PKD1-233ENST00000567355 TRIM28Q13263 835 aaKnown RBP21.43■■□□□ 1.02
PKD1-233ENST00000567355 RTKN2Q8IZC4 609 aa21.43■■□□□ 1.02
PKD1-233ENST00000567355 RPGRQ92834 1020 aaKnown RBP21.43■■□□□ 1.02
PKD1-233ENST00000567355 NLRP3Q96P20 1036 aa21.43■■□□□ 1.02
PKD1-233ENST00000567355 CCDC30Q5VVM6 783 aa21.42■■□□□ 1.02
PKD1-233ENST00000567355 DDX60Q8IY21 1712 aaKnown RBP21.42■■□□□ 1.02
PKD1-233ENST00000567355 SYNE4Q8N205 404 aa21.42■■□□□ 1.02
PKD1-233ENST00000567355 RBM17Q96I25 401 aaKnown RBP21.42■■□□□ 1.02
PKD1-233ENST00000567355 CHMP4AQ9BY43 222 aa21.42■■□□□ 1.02
PKD1-233ENST00000567355 WDR90Q96KV7 1748 aa21.41■■□□□ 1.02
PKD1-233ENST00000567355 SH3TC1Q8TE82 1336 aa21.41■■□□□ 1.02
PKD1-233ENST00000567355 WDR63Q8IWG1 891 aa21.41■■□□□ 1.02
PKD1-233ENST00000567355 RRAGCQ9HB90 399 aa21.41■■□□□ 1.02
PKD1-233ENST00000567355 TRMT112Q9UI30 125 aaKnown RBP21.41■■□□□ 1.02
PKD1-233ENST00000567355 CC2D2BQ6DHV5 1058 aa21.4■■□□□ 1.02
PKD1-233ENST00000567355 HCLS1P14317 486 aaPredicted RBP21.39■■□□□ 1.01
PKD1-233ENST00000567355 PSMD1Q99460 953 aa21.39■■□□□ 1.01
PKD1-233ENST00000567355 ABCC4O15439 1325 aa21.38■■□□□ 1.01
PKD1-233ENST00000567355 FANCIQ9NVI1 1328 aa21.38■■□□□ 1.01
PKD1-233ENST00000567355 POTECB2RU33 542 aa21.38■■□□□ 1.01
PKD1-233ENST00000567355 ATP5J2-PTCD1G3V325 749 aa21.38■■□□□ 1.01
PKD1-233ENST00000567355 GOLGA2Q08379 1002 aa21.38■■□□□ 1.01
PKD1-233ENST00000567355 SLC51AQ86UW1 340 aa21.38■■□□□ 1.01
PKD1-233ENST00000567355 FAM9BQ8IZU0 186 aa21.38■■□□□ 1.01
PKD1-233ENST00000567355 RBM46Q8TBY0 533 aaKnown RBP21.38■■□□□ 1.01
PKD1-233ENST00000567355 ZNF277Q9NRM2 450 aaPredicted RBP21.38■■□□□ 1.01
PKD1-233ENST00000567355 HSPA6P17066 643 aa21.37■■□□□ 1.01
PKD1-233ENST00000567355 TWISTNBQ3B726 338 aaPredicted RBP21.37■■□□□ 1.01
PKD1-233ENST00000567355 GRIPAP1Q4V328 841 aa21.37■■□□□ 1.01
PKD1-233ENST00000567355 RIC3Q7Z5B4 369 aa21.37■■□□□ 1.01
PKD1-233ENST00000567355 PPEF1O14829 653 aaPredicted RBP21.36■■□□□ 1.01
PKD1-233ENST00000567355 DPY19L2Q6NUT2 758 aa21.36■■□□□ 1.01
PKD1-233ENST00000567355 FAM89AQ96GI7 184 aa21.36■■□□□ 1.01
PKD1-233ENST00000567355 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
PKD1-233ENST00000567355 SALL2Q9Y467 1007 aaPredicted RBP21.35■■□□□ 1.01
PKD1-233ENST00000567355 ATP6V0A2Q9Y487 856 aa21.35■■□□□ 1.01
PKD1-233ENST00000567355 COL4A5P29400 1685 aa21.34■■□□□ 1.01
PKD1-233ENST00000567355 VEGFAP15692 232 aaPredicted RBP21.34■■□□□ 1.01
PKD1-233ENST00000567355 IARSP41252 1262 aaKnown RBP21.34■■□□□ 1.01
PKD1-233ENST00000567355 SF3B3Q15393 1217 aaKnown RBP21.34■■□□□ 1.01
PKD1-233ENST00000567355 ZNF428Q96B54 188 aa21.34■■□□□ 1.01
PKD1-233ENST00000567355 ZNF521Q96K83 1311 aa21.33■■□□□ 1.01
PKD1-233ENST00000567355 BBOX1O75936 387 aa21.33■■□□□ 1.01
PKD1-233ENST00000567355 ZBTB38Q8NAP3 1195 aaPredicted RBP21.33■■□□□ 1.01
PKD1-233ENST00000567355 CCDC191Q8NCU4 936 aa21.33■■□□□ 1.01
PKD1-233ENST00000567355 MYD88Q99836 296 aa21.33■■□□□ 1.01
PKD1-233ENST00000567355 METTL22Q9BUU2 404 aaPredicted RBP21.33■■□□□ 1.01
PKD1-233ENST00000567355 TAF1P21675 1872 aa21.32■■□□□ 1
PKD1-233ENST00000567355 FZD9O00144 591 aa21.32■■□□□ 1
PKD1-233ENST00000567355 VAMP4O75379 141 aa21.32■■□□□ 1
PKD1-233ENST00000567355 DDNO94850 711 aaPredicted RBP21.32■■□□□ 1
PKD1-233ENST00000567355 DDX58O95786 925 aaKnown RBP21.32■■□□□ 1
PKD1-233ENST00000567355 FSTL1Q12841 308 aa21.32■■□□□ 1
PKD1-233ENST00000567355 GRAPQ13588 217 aa21.32■■□□□ 1
PKD1-233ENST00000567355 KSR2Q6VAB6 950 aa21.32■■□□□ 1
PKD1-233ENST00000567355 C16orf71Q8IYS4 520 aaPredicted RBP21.32■■□□□ 1
PKD1-233ENST00000567355 GRAPLQ8TC17 118 aaPredicted RBP21.32■■□□□ 1
PKD1-233ENST00000567355 STK31Q9BXU1 1019 aa21.32■■□□□ 1
PKD1-233ENST00000567355 LRRC37AA6NMS7 1700 aa21.32■■□□□ 1
PKD1-233ENST00000567355 COL4A1P02462 1669 aa21.31■■□□□ 1
PKD1-233ENST00000567355 DDX46Q7L014 1031 aaKnown RBP21.31■■□□□ 1
PKD1-233ENST00000567355 G2E3Q7L622 706 aa21.31■■□□□ 1
PKD1-233ENST00000567355 SP8Q8IXZ3 490 aa21.31■■□□□ 1
PKD1-233ENST00000567355 L3MBTL3Q96JM7 780 aaPredicted RBP21.31■■□□□ 1
PKD1-233ENST00000567355 RTFDC1Q9BY42 306 aaPredicted RBP21.31■■□□□ 1
PKD1-233ENST00000567355 MAP3K2Q9Y2U5 619 aa21.31■■□□□ 1
PKD1-233ENST00000567355 ZNF541Q9H0D2 1346 aa21.3■■□□□ 1
PKD1-233ENST00000567355 CACNA1FO60840 1977 aa21.3■■□□□ 1
PKD1-233ENST00000567355 PI4KAP2A4QPH2 592 aa21.3■■□□□ 1
PKD1-233ENST00000567355 IRS4O14654 1257 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms