RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 AIMP1Q12904 312 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-206ENST00000566779 PROSER3Q2NL68 480 aa13.18□□□□□ -0.3
GTF3C1-206ENST00000566779 FAM212AQ96EL1 285 aa13.18□□□□□ -0.3
GTF3C1-206ENST00000566779 MRS2Q9HD23 443 aa13.18□□□□□ -0.3
GTF3C1-206ENST00000566779 RIOK3O14730 519 aaKnown RBP13.17□□□□□ -0.3
GTF3C1-206ENST00000566779 C21orf2O43822 256 aa13.17□□□□□ -0.3
GTF3C1-206ENST00000566779 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
GTF3C1-206ENST00000566779 CLEC4GQ6UXB4 293 aa13.17□□□□□ -0.3
GTF3C1-206ENST00000566779 NUTM1Q86Y26 1132 aa13.17□□□□□ -0.3
GTF3C1-206ENST00000566779 ZNF428Q96B54 188 aa13.17□□□□□ -0.3
GTF3C1-206ENST00000566779 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
GTF3C1-206ENST00000566779 ABCC12Q96J65 1359 aa13.17□□□□□ -0.3
GTF3C1-206ENST00000566779 ERBB4Q15303 1308 aa13.15□□□□□ -0.3
GTF3C1-206ENST00000566779 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
GTF3C1-206ENST00000566779 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-206ENST00000566779 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
GTF3C1-206ENST00000566779 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
GTF3C1-206ENST00000566779 TAF1P21675 1872 aa13.14□□□□□ -0.31
GTF3C1-206ENST00000566779 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
GTF3C1-206ENST00000566779 XAGE3Q8WTP9 111 aa13.14□□□□□ -0.31
GTF3C1-206ENST00000566779 CNKSR1Q969H4 720 aa13.14□□□□□ -0.31
GTF3C1-206ENST00000566779 MASTLQ96GX5 879 aa13.14□□□□□ -0.31
GTF3C1-206ENST00000566779 NMRK2Q9NPI5 230 aa13.14□□□□□ -0.31
GTF3C1-206ENST00000566779 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
GTF3C1-206ENST00000566779 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
GTF3C1-206ENST00000566779 SALL2Q9Y467 1007 aaPredicted RBP13.14□□□□□ -0.31
GTF3C1-206ENST00000566779 UBN2Q6ZU65 1347 aa13.13□□□□□ -0.31
GTF3C1-206ENST00000566779 ERVV-1B6SEH8 477 aa13.13□□□□□ -0.31
GTF3C1-206ENST00000566779 CHL1O00533 1208 aa13.13□□□□□ -0.31
GTF3C1-206ENST00000566779 SRGNP10124 158 aa13.13□□□□□ -0.31
GTF3C1-206ENST00000566779 ERFEQ4G0M1 354 aa13.13□□□□□ -0.31
GTF3C1-206ENST00000566779 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
GTF3C1-206ENST00000566779 NYXQ9GZU5 481 aa13.13□□□□□ -0.31
GTF3C1-206ENST00000566779 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
GTF3C1-206ENST00000566779 NFKBIEO00221 500 aa13.12□□□□□ -0.31
GTF3C1-206ENST00000566779 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-206ENST00000566779 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-206ENST00000566779 CALD1Q05682 793 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-206ENST00000566779 PDIA6Q15084 440 aa13.12□□□□□ -0.31
GTF3C1-206ENST00000566779 DUSP27Q5VZP5 1158 aa13.12□□□□□ -0.31
GTF3C1-206ENST00000566779 COPS6Q7L5N1 327 aa13.12□□□□□ -0.31
GTF3C1-206ENST00000566779 RPGRQ92834 1020 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-206ENST00000566779 DDX60Q8IY21 1712 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 NPR1P16066 1061 aa13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 LMNB1P20700 586 aa13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 GNAI1P63096 354 aa13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 SUSD4Q5VX71 490 aa13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 OLFM4Q6UX06 510 aa13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 GIGYF2Q6Y7W6 1299 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 TAOK3Q9H2K8 898 aa13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 KDM2BQ8NHM5 1336 aa13.11□□□□□ -0.31
GTF3C1-206ENST00000566779 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-206ENST00000566779 PPP1R42Q7Z4L9 355 aa13.1□□□□□ -0.31
GTF3C1-206ENST00000566779 TSR2Q969E8 191 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-206ENST00000566779 DDX21Q9NR30 783 aaKnown RBP eCLIP13.1□□□□□ -0.31
GTF3C1-206ENST00000566779 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
GTF3C1-206ENST00000566779 KIF3CO14782 793 aa13.09□□□□□ -0.31
GTF3C1-206ENST00000566779 PRELPP51888 382 aa13.09□□□□□ -0.31
GTF3C1-206ENST00000566779 ZNF34Q8IZ26 560 aa13.09□□□□□ -0.31
GTF3C1-206ENST00000566779 FAM9BQ8IZU0 186 aa13.09□□□□□ -0.31
GTF3C1-206ENST00000566779 UTP14AQ9BVJ6 771 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-206ENST00000566779 SPEF2Q9C093 1822 aa13.09□□□□□ -0.31
GTF3C1-206ENST00000566779 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.31
GTF3C1-206ENST00000566779 NTSR2O95665 410 aa13.08□□□□□ -0.32
GTF3C1-206ENST00000566779 PARP10Q53GL7 1025 aa13.08□□□□□ -0.32
GTF3C1-206ENST00000566779 CCDC93Q567U6 631 aa13.08□□□□□ -0.32
GTF3C1-206ENST00000566779 LRP10Q7Z4F1 713 aa13.08□□□□□ -0.32
GTF3C1-206ENST00000566779 RRAGCQ9HB90 399 aa13.08□□□□□ -0.32
GTF3C1-206ENST00000566779 DBF4Q9UBU7 674 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-206ENST00000566779 HSP90AB3PQ58FF7 597 aa13.07□□□□□ -0.32
GTF3C1-206ENST00000566779 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-206ENST00000566779 SOGA3Q5TF21 947 aa13.07□□□□□ -0.32
GTF3C1-206ENST00000566779 C3orf67Q6ZVT6 689 aa13.07□□□□□ -0.32
GTF3C1-206ENST00000566779 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 PITPNM1O00562 1244 aa13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 HOXB7P09629 217 aa13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 ZNF853P0CG23 659 aa13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 HCLS1P14317 486 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 SLC51AQ86UW1 340 aa13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 RBM17Q96I25 401 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-206ENST00000566779 MYH3P11055 1940 aa13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 CACNA1FO60840 1977 aa13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 STK25O00506 426 aa13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 ALDH1B1P30837 517 aa13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 RIC3Q7Z5B4 369 aa13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 NLRP10Q86W26 655 aa13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 NLRP3Q96P20 1036 aa13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 PHAXQ9H814 394 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 HYPKQ9NX55 129 aa13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 WDR90Q96KV7 1748 aa13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 RIC1Q4ADV7 1423 aa13.05□□□□□ -0.32
GTF3C1-206ENST00000566779 PPEF1O14829 653 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-206ENST00000566779 TCIRG1Q13488 830 aa13.04□□□□□ -0.32
GTF3C1-206ENST00000566779 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms