RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 FSD1Q9BTV5 496 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 GLI3P10071 1580 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 A0A0G2JS52 829 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 EXOC5O00471 708 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 TMX3Q96JJ7 454 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 TEX13AQ9BXU3 409 aaPredicted RBP10.58□□□□□ -0.72
LINC01541-201ENST00000566582 UBR2Q8IWV8 1755 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 SHANK3Q9BYB0 1731 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 KAT6BQ8WYB5 2073 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 H7C1W4 665 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 HIP1O00291 1037 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 STARD3NLO95772 234 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 KCNJ4P48050 445 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 KIF6Q6ZMV9 814 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 DNAJC10Q8IXB1 793 aa10.58□□□□□ -0.72
LINC01541-201ENST00000566582 LSG1Q9H089 658 aaKnown RBP10.58□□□□□ -0.72
LINC01541-201ENST00000566582 ROBO1Q9Y6N7 1651 aa10.57□□□□□ -0.72
LINC01541-201ENST00000566582 ADAMTS2O95450 1211 aa10.57□□□□□ -0.72
LINC01541-201ENST00000566582 RFX5P48382 616 aaPredicted RBP10.57□□□□□ -0.72
LINC01541-201ENST00000566582 TNNI3KQ59H18 835 aa10.57□□□□□ -0.72
LINC01541-201ENST00000566582 CCDC9Q9Y3X0 531 aaKnown RBP10.57□□□□□ -0.72
LINC01541-201ENST00000566582 FPGT-TNNI3KV9GXZ4 949 aa10.57□□□□□ -0.72
LINC01541-201ENST00000566582 TNS2Q63HR2 1409 aa10.57□□□□□ -0.72
LINC01541-201ENST00000566582 PTMSP20962 102 aa10.57□□□□□ -0.72
LINC01541-201ENST00000566582 CASP7P55210 303 aa10.57□□□□□ -0.72
LINC01541-201ENST00000566582 HOMEZQ8IX15 550 aa10.57□□□□□ -0.72
LINC01541-201ENST00000566582 ATG3Q9NT62 314 aa10.57□□□□□ -0.72
LINC01541-201ENST00000566582 SNX14Q9Y5W7 946 aa10.57□□□□□ -0.72
LINC01541-201ENST00000566582 COL15A1P39059 1388 aa10.56□□□□□ -0.72
LINC01541-201ENST00000566582 TULP1O00294 542 aaPredicted RBP10.56□□□□□ -0.72
LINC01541-201ENST00000566582 FOXO4P98177 505 aa10.56□□□□□ -0.72
LINC01541-201ENST00000566582 PAPPAQ13219 1627 aa10.56□□□□□ -0.72
LINC01541-201ENST00000566582 NMIQ13287 307 aaPredicted RBP10.56□□□□□ -0.72
LINC01541-201ENST00000566582 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
LINC01541-201ENST00000566582 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
LINC01541-201ENST00000566582 NEUROD6Q96NK8 337 aa10.56□□□□□ -0.72
LINC01541-201ENST00000566582 DNAJC2Q99543 621 aaKnown RBP10.56□□□□□ -0.72
LINC01541-201ENST00000566582 DBNLQ9UJU6 430 aaKnown RBP10.56□□□□□ -0.72
LINC01541-201ENST00000566582 COL14A1Q05707 1796 aaKnown RBP10.56□□□□□ -0.72
LINC01541-201ENST00000566582 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
LINC01541-201ENST00000566582 PTH1RQ03431 593 aa10.55□□□□□ -0.72
LINC01541-201ENST00000566582 PKP1Q13835 747 aa10.55□□□□□ -0.72
LINC01541-201ENST00000566582 PRPF40BQ6NWY9 871 aaKnown RBP10.55□□□□□ -0.72
LINC01541-201ENST00000566582 NUTM2BA6NNL0 878 aaPredicted RBP10.55□□□□□ -0.72
LINC01541-201ENST00000566582 NUTM2EB1AL46 878 aaPredicted RBP10.55□□□□□ -0.72
LINC01541-201ENST00000566582 ZKSCAN1P17029 563 aaPredicted RBP10.55□□□□□ -0.72
LINC01541-201ENST00000566582 CASTP20810 708 aaKnown RBP10.55□□□□□ -0.72
LINC01541-201ENST00000566582 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
LINC01541-201ENST00000566582 SKOR2Q2VWA4 1001 aaPredicted RBP10.55□□□□□ -0.72
LINC01541-201ENST00000566582 NUTM2AQ8IVF1 878 aaPredicted RBP10.55□□□□□ -0.72
LINC01541-201ENST00000566582 RASEFQ8IZ41 740 aa10.55□□□□□ -0.72
LINC01541-201ENST00000566582 EDC3Q96F86 508 aaKnown RBP10.55□□□□□ -0.72
LINC01541-201ENST00000566582 DBNDD2Q9BQY9 259 aa10.55□□□□□ -0.72
LINC01541-201ENST00000566582 BAG4O95429 457 aaKnown RBP10.54□□□□□ -0.72
LINC01541-201ENST00000566582 ATP5JP18859 108 aa10.54□□□□□ -0.72
LINC01541-201ENST00000566582 FOXD4L5Q5VV16 416 aaPredicted RBP10.54□□□□□ -0.72
LINC01541-201ENST00000566582 MCTP1Q6DN14 999 aa10.54□□□□□ -0.72
LINC01541-201ENST00000566582 FOXD4L4Q8WXT5 416 aaPredicted RBP10.54□□□□□ -0.72
LINC01541-201ENST00000566582 CCDC171Q6TFL3 1326 aa10.54□□□□□ -0.72
LINC01541-201ENST00000566582 PRIM1P49642 420 aaKnown RBP10.54□□□□□ -0.72
LINC01541-201ENST00000566582 CCDC57Q2TAC2 916 aa10.54□□□□□ -0.72
LINC01541-201ENST00000566582 IL17RAQ96F46 866 aa10.54□□□□□ -0.72
LINC01541-201ENST00000566582 ZNF594Q96JF6 807 aaPredicted RBP10.54□□□□□ -0.72
LINC01541-201ENST00000566582 NDUFB9Q9Y6M9 179 aa10.54□□□□□ -0.72
LINC01541-201ENST00000566582 NUP188Q5SRE5 1749 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 A0A0D9SFI3 127 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 IL15P40933 162 aaPredicted RBP10.53□□□□□ -0.72
LINC01541-201ENST00000566582 TAF7LQ5H9L4 462 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 IL27Q8NEV9 243 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 FAM89AQ96GI7 184 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 JAKMIP1Q96N16 626 aaKnown RBP10.53□□□□□ -0.72
LINC01541-201ENST00000566582 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
LINC01541-201ENST00000566582 RBM8AQ9Y5S9 174 aaKnown RBP10.53□□□□□ -0.72
LINC01541-201ENST00000566582 GOLGA6L3A6NEY3 463 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 GPTP24298 496 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 TIMM10P62072 90 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 PIP4K2BP78356 416 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 CUL4AQ13619 759 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 L1TD1Q5T7N2 865 aaKnown RBP10.53□□□□□ -0.72
LINC01541-201ENST00000566582 INTS4Q96HW7 963 aaKnown RBP10.53□□□□□ -0.72
LINC01541-201ENST00000566582 LARP6Q9BRS8 491 aaKnown RBP10.53□□□□□ -0.72
LINC01541-201ENST00000566582 ISCA1Q9BUE6 129 aa10.53□□□□□ -0.72
LINC01541-201ENST00000566582 DISP2A7MBM2 1401 aa10.52□□□□□ -0.72
LINC01541-201ENST00000566582 BCL9O00512 1426 aa10.52□□□□□ -0.72
LINC01541-201ENST00000566582 EYA2O00167 538 aa10.52□□□□□ -0.73
LINC01541-201ENST00000566582 CPA1P15085 419 aa10.52□□□□□ -0.73
LINC01541-201ENST00000566582 AK2P54819 239 aa10.52□□□□□ -0.73
LINC01541-201ENST00000566582 DDB1Q16531 1140 aa10.52□□□□□ -0.73
LINC01541-201ENST00000566582 LRRC24Q50LG9 513 aa10.52□□□□□ -0.73
LINC01541-201ENST00000566582 RNF20Q5VTR2 975 aa10.52□□□□□ -0.73
LINC01541-201ENST00000566582 ATG9AQ7Z3C6 839 aa10.52□□□□□ -0.73
LINC01541-201ENST00000566582 DDX49Q9Y6V7 483 aaKnown RBP10.52□□□□□ -0.73
LINC01541-201ENST00000566582 AHDC1Q5TGY3 1603 aaPredicted RBP10.52□□□□□ -0.73
LINC01541-201ENST00000566582 MAP3K15Q6ZN16 1313 aa10.52□□□□□ -0.73
LINC01541-201ENST00000566582 CYP2E1P05181 493 aaPredicted RBP10.52□□□□□ -0.73
LINC01541-201ENST00000566582 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
LINC01541-201ENST00000566582 CLEC17AQ6ZS10 378 aa10.52□□□□□ -0.73
LINC01541-201ENST00000566582 CYP46A1Q9Y6A2 500 aa10.52□□□□□ -0.73
LINC01541-201ENST00000566582 ITGB4P16144 1822 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms