RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 DDX21Q9NR30 783 aaKnown RBP eCLIP16.09■□□□□ 0.17
KLHDC4-216ENST00000566561 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
KLHDC4-216ENST00000566561 UBN2Q6ZU65 1347 aa16.09■□□□□ 0.17
KLHDC4-216ENST00000566561 HOXB7P09629 217 aa16.08■□□□□ 0.16
KLHDC4-216ENST00000566561 GNAI1P63096 354 aa16.08■□□□□ 0.16
KLHDC4-216ENST00000566561 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.16
KLHDC4-216ENST00000566561 MRS2Q9HD23 443 aa16.08■□□□□ 0.16
KLHDC4-216ENST00000566561 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.16
KLHDC4-216ENST00000566561 SLX4Q8IY92 1834 aa16.08■□□□□ 0.16
KLHDC4-216ENST00000566561 ALDH1B1P30837 517 aa16.07■□□□□ 0.16
KLHDC4-216ENST00000566561 PARP10Q53GL7 1025 aa16.07■□□□□ 0.16
KLHDC4-216ENST00000566561 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
KLHDC4-216ENST00000566561 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
KLHDC4-216ENST00000566561 IFT57Q9NWB7 429 aa16.07■□□□□ 0.16
KLHDC4-216ENST00000566561 ABCC12Q96J65 1359 aa16.06■□□□□ 0.16
KLHDC4-216ENST00000566561 LTBP3Q9NS15 1303 aa16.06■□□□□ 0.16
KLHDC4-216ENST00000566561 CCDC93Q567U6 631 aa16.06■□□□□ 0.16
KLHDC4-216ENST00000566561 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
KLHDC4-216ENST00000566561 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
KLHDC4-216ENST00000566561 DBF4Q9UBU7 674 aaPredicted RBP16.06■□□□□ 0.16
KLHDC4-216ENST00000566561 IBTKQ9P2D0 1353 aaPredicted RBP16.05■□□□□ 0.16
KLHDC4-216ENST00000566561 POTECB2RU33 542 aa16.05■□□□□ 0.16
KLHDC4-216ENST00000566561 NTSR2O95665 410 aa16.05■□□□□ 0.16
KLHDC4-216ENST00000566561 ZNF853P0CG23 659 aa16.05■□□□□ 0.16
KLHDC4-216ENST00000566561 HSP90AB3PQ58FF7 597 aa16.05■□□□□ 0.16
KLHDC4-216ENST00000566561 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
KLHDC4-216ENST00000566561 UTP14AQ9BVJ6 771 aaKnown RBP16.05■□□□□ 0.16
KLHDC4-216ENST00000566561 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
KLHDC4-216ENST00000566561 C7orf43Q8WVR3 580 aa16.04■□□□□ 0.16
KLHDC4-216ENST00000566561 MKRN1Q9UHC7 482 aaKnown RBP16.04■□□□□ 0.16
KLHDC4-216ENST00000566561 TCIRG1Q13488 830 aa16.03■□□□□ 0.16
KLHDC4-216ENST00000566561 CRY2Q49AN0 593 aa16.03■□□□□ 0.16
KLHDC4-216ENST00000566561 RBM17Q96I25 401 aaKnown RBP16.03■□□□□ 0.16
KLHDC4-216ENST00000566561 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
KLHDC4-216ENST00000566561 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
KLHDC4-216ENST00000566561 IQCA1LA6NCM1 817 aa16.02■□□□□ 0.16
KLHDC4-216ENST00000566561 OLFM4Q6UX06 510 aa16.02■□□□□ 0.16
KLHDC4-216ENST00000566561 ANKRD13DQ6ZTN6 518 aa16.02■□□□□ 0.16
KLHDC4-216ENST00000566561 NLRP10Q86W26 655 aa16.02■□□□□ 0.16
KLHDC4-216ENST00000566561 PLBD2Q8NHP8 589 aa16.02■□□□□ 0.16
KLHDC4-216ENST00000566561 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
KLHDC4-216ENST00000566561 FKBP4Q02790 459 aaKnown RBP eCLIP16.01■□□□□ 0.15
KLHDC4-216ENST00000566561 RTKN2Q8IZC4 609 aa16.01■□□□□ 0.15
KLHDC4-216ENST00000566561 TRMT112Q9UI30 125 aaKnown RBP16.01■□□□□ 0.15
KLHDC4-216ENST00000566561 RIC1Q4ADV7 1423 aa16.01■□□□□ 0.15
KLHDC4-216ENST00000566561 RNF123Q5XPI4 1314 aa16■□□□□ 0.15
KLHDC4-216ENST00000566561 CCDC27Q2M243 656 aa16■□□□□ 0.15
KLHDC4-216ENST00000566561 C8orf58Q8NAV2 365 aa16■□□□□ 0.15
KLHDC4-216ENST00000566561 ZNF428Q96B54 188 aa16■□□□□ 0.15
KLHDC4-216ENST00000566561 AIDAQ96BJ3 306 aa16■□□□□ 0.15
KLHDC4-216ENST00000566561 NUP98P52948 1817 aa16■□□□□ 0.15
KLHDC4-216ENST00000566561 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 DDNO94850 711 aaPredicted RBP15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 HOXA10P31260 410 aaPredicted RBP15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 SLC10A5Q5PT55 438 aa15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 LDHDQ86WU2 507 aa15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 WWC1Q8IX03 1113 aa15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 CRAMP1Q96RY5 1269 aa15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 CHMP4AQ9BY43 222 aa15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 ZNF277Q9NRM2 450 aaPredicted RBP15.99■□□□□ 0.15
KLHDC4-216ENST00000566561 ATP5J2-PTCD1G3V325 749 aa15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 PPEF1O14829 653 aaPredicted RBP15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 POTEIP0CG38 1075 aa15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 POTEJP0CG39 1038 aa15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 HCLS1P14317 486 aaPredicted RBP15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 GOLGA2Q08379 1002 aa15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 SYNE4Q8N205 404 aa15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 TMX4Q9H1E5 349 aaPredicted RBP15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 PHAXQ9H814 394 aaKnown RBP15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 PRDM10Q9NQV6 1147 aa15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 ADAMTSL1Q8N6G6 1762 aa15.98■□□□□ 0.15
KLHDC4-216ENST00000566561 SH3TC1Q8TE82 1336 aa15.97■□□□□ 0.15
KLHDC4-216ENST00000566561 FOXN1O15353 648 aa15.97■□□□□ 0.15
KLHDC4-216ENST00000566561 CCDC30Q5VVM6 783 aa15.97■□□□□ 0.15
KLHDC4-216ENST00000566561 CC2D2BQ6DHV5 1058 aa15.97■□□□□ 0.15
KLHDC4-216ENST00000566561 L3MBTL3Q96JM7 780 aaPredicted RBP15.97■□□□□ 0.15
KLHDC4-216ENST00000566561 PASKQ96RG2 1323 aa15.96■□□□□ 0.15
KLHDC4-216ENST00000566561 CTCFP49711 727 aaPredicted RBP15.96■□□□□ 0.15
KLHDC4-216ENST00000566561 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.15
KLHDC4-216ENST00000566561 TSPYL6Q8N831 410 aa15.96■□□□□ 0.15
KLHDC4-216ENST00000566561 TMEM88BA6NKF7 163 aa15.95■□□□□ 0.14
KLHDC4-216ENST00000566561 IARSP41252 1262 aaKnown RBP15.95■□□□□ 0.14
KLHDC4-216ENST00000566561 GRIPAP1Q4V328 841 aa15.95■□□□□ 0.14
KLHDC4-216ENST00000566561 PSMD1Q99460 953 aa15.95■□□□□ 0.14
KLHDC4-216ENST00000566561 ISCA1Q9BUE6 129 aa15.95■□□□□ 0.14
KLHDC4-216ENST00000566561 TAF1DQ9H5J8 278 aaPredicted RBP15.95■□□□□ 0.14
KLHDC4-216ENST00000566561 DDX58O95786 925 aaKnown RBP15.94■□□□□ 0.14
KLHDC4-216ENST00000566561 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
KLHDC4-216ENST00000566561 EAPPQ56P03 285 aaPredicted RBP15.94■□□□□ 0.14
KLHDC4-216ENST00000566561 RTL5Q5HYW3 569 aaPredicted RBP15.94■□□□□ 0.14
KLHDC4-216ENST00000566561 DDX46Q7L014 1031 aaKnown RBP15.94■□□□□ 0.14
KLHDC4-216ENST00000566561 FAM89AQ96GI7 184 aa15.94■□□□□ 0.14
KLHDC4-216ENST00000566561 STK31Q9BXU1 1019 aa15.94■□□□□ 0.14
KLHDC4-216ENST00000566561 ABCC4O15439 1325 aa15.94■□□□□ 0.14
KLHDC4-216ENST00000566561 IL16Q14005 1332 aa15.94■□□□□ 0.14
KLHDC4-216ENST00000566561 TWISTNBQ3B726 338 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms