RNA–Protein interactions for RNA: ENST00000566519.1

EIF3C-210, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2

Gene EIF3C, Length 620 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-210ENST00000566519 LMOD3Q0VAK6 560 aa18.79■□□□□ 0.6
EIF3C-210ENST00000566519 AIMP1Q12904 312 aaKnown RBP18.79■□□□□ 0.6
EIF3C-210ENST00000566519 MBIPQ9NS73 344 aa18.79■□□□□ 0.6
EIF3C-210ENST00000566519 CHPF2Q9P2E5 772 aa18.79■□□□□ 0.6
EIF3C-210ENST00000566519 RIC1Q4ADV7 1423 aa18.79■□□□□ 0.6
EIF3C-210ENST00000566519 IBTKQ9P2D0 1353 aaPredicted RBP18.79■□□□□ 0.6
EIF3C-210ENST00000566519 HOXA10P31260 410 aaPredicted RBP18.78■□□□□ 0.6
EIF3C-210ENST00000566519 ZNF541Q9H0D2 1346 aa18.77■□□□□ 0.6
EIF3C-210ENST00000566519 PCNTO95613 3336 aa18.77■□□□□ 0.6
EIF3C-210ENST00000566519 CCDC93Q567U6 631 aa18.77■□□□□ 0.6
EIF3C-210ENST00000566519 DDX21Q9NR30 783 aaKnown RBP eCLIP18.77■□□□□ 0.6
EIF3C-210ENST00000566519 VEGFAP15692 232 aaPredicted RBP18.76■□□□□ 0.59
EIF3C-210ENST00000566519 GTF2E1P29083 439 aaPredicted RBP18.76■□□□□ 0.59
EIF3C-210ENST00000566519 FKBP4Q02790 459 aaKnown RBP eCLIP18.76■□□□□ 0.59
EIF3C-210ENST00000566519 SLC10A5Q5PT55 438 aa18.76■□□□□ 0.59
EIF3C-210ENST00000566519 NLRP10Q86W26 655 aa18.76■□□□□ 0.59
EIF3C-210ENST00000566519 CFAP44Q96MT7 982 aa18.76■□□□□ 0.59
EIF3C-210ENST00000566519 NYXQ9GZU5 481 aa18.76■□□□□ 0.59
EIF3C-210ENST00000566519 LTBP1Q14766 1721 aa18.76■□□□□ 0.59
EIF3C-210ENST00000566519 APLP1P51693 650 aa18.75■□□□□ 0.59
EIF3C-210ENST00000566519 SCN4AP35499 1836 aa18.74■□□□□ 0.59
EIF3C-210ENST00000566519 TCERG1O14776 1098 aaKnown RBP18.74■□□□□ 0.59
EIF3C-210ENST00000566519 FSTL1Q12841 308 aa18.74■□□□□ 0.59
EIF3C-210ENST00000566519 DUSP27Q5VZP5 1158 aa18.74■□□□□ 0.59
EIF3C-210ENST00000566519 ADAMTSL1Q8N6G6 1762 aa18.73■□□□□ 0.59
EIF3C-210ENST00000566519 HCLS1P14317 486 aaPredicted RBP18.73■□□□□ 0.59
EIF3C-210ENST00000566519 ALDH1B1P30837 517 aa18.73■□□□□ 0.59
EIF3C-210ENST00000566519 TCIRG1Q13488 830 aa18.73■□□□□ 0.59
EIF3C-210ENST00000566519 C16orf71Q8IYS4 520 aaPredicted RBP18.73■□□□□ 0.59
EIF3C-210ENST00000566519 C8orf58Q8NAV2 365 aa18.73■□□□□ 0.59
EIF3C-210ENST00000566519 ELL2O00472 640 aaPredicted RBP18.72■□□□□ 0.59
EIF3C-210ENST00000566519 SOGA3Q5TF21 947 aa18.72■□□□□ 0.59
EIF3C-210ENST00000566519 HDGFL1Q5TGJ6 251 aa18.72■□□□□ 0.59
EIF3C-210ENST00000566519 UTP14AQ9BVJ6 771 aaKnown RBP18.72■□□□□ 0.59
EIF3C-210ENST00000566519 IARSP41252 1262 aaKnown RBP18.71■□□□□ 0.59
EIF3C-210ENST00000566519 PARP10Q53GL7 1025 aa18.71■□□□□ 0.59
EIF3C-210ENST00000566519 TSPYL6Q8N831 410 aa18.71■□□□□ 0.59
EIF3C-210ENST00000566519 CRAMP1Q96RY5 1269 aa18.71■□□□□ 0.59
EIF3C-210ENST00000566519 PHAXQ9H814 394 aaKnown RBP18.71■□□□□ 0.59
EIF3C-210ENST00000566519 ABCC4O15439 1325 aa18.71■□□□□ 0.59
EIF3C-210ENST00000566519 FZD9O00144 591 aa18.7■□□□□ 0.58
EIF3C-210ENST00000566519 PPP1R42Q7Z4L9 355 aa18.7■□□□□ 0.58
EIF3C-210ENST00000566519 RTKN2Q8IZC4 609 aa18.7■□□□□ 0.58
EIF3C-210ENST00000566519 SMC1BQ8NDV3 1235 aa18.7■□□□□ 0.58
EIF3C-210ENST00000566519 ISCA1Q9BUE6 129 aa18.7■□□□□ 0.58
EIF3C-210ENST00000566519 DUOX1Q9NRD9 1551 aa18.69■□□□□ 0.58
EIF3C-210ENST00000566519 ATP5J2-PTCD1G3V325 749 aa18.69■□□□□ 0.58
EIF3C-210ENST00000566519 HOXB7P09629 217 aa18.69■□□□□ 0.58
EIF3C-210ENST00000566519 DPY19L2Q6NUT2 758 aa18.69■□□□□ 0.58
EIF3C-210ENST00000566519 RPGRQ92834 1020 aaKnown RBP18.69■□□□□ 0.58
EIF3C-210ENST00000566519 PSMD1Q99460 953 aa18.69■□□□□ 0.58
EIF3C-210ENST00000566519 PPEF1O14829 653 aaPredicted RBP18.68■□□□□ 0.58
EIF3C-210ENST00000566519 PLBD2Q8NHP8 589 aa18.68■□□□□ 0.58
EIF3C-210ENST00000566519 RBM17Q96I25 401 aaKnown RBP18.68■□□□□ 0.58
EIF3C-210ENST00000566519 L3MBTL3Q96JM7 780 aaPredicted RBP18.68■□□□□ 0.58
EIF3C-210ENST00000566519 IFT57Q9NWB7 429 aa18.68■□□□□ 0.58
EIF3C-210ENST00000566519 LRRC37AA6NMS7 1700 aa18.68■□□□□ 0.58
EIF3C-210ENST00000566519 ANKRD13DQ6ZTN6 518 aa18.67■□□□□ 0.58
EIF3C-210ENST00000566519 NLRP3Q96P20 1036 aa18.67■□□□□ 0.58
EIF3C-210ENST00000566519 TAF1DQ9H5J8 278 aaPredicted RBP18.67■□□□□ 0.58
EIF3C-210ENST00000566519 TSR2Q969E8 191 aaKnown RBP18.66■□□□□ 0.58
EIF3C-210ENST00000566519 FAM89AQ96GI7 184 aa18.66■□□□□ 0.58
EIF3C-210ENST00000566519 DBF4Q9UBU7 674 aaPredicted RBP18.66■□□□□ 0.58
EIF3C-210ENST00000566519 TRMT112Q9UI30 125 aaKnown RBP18.66■□□□□ 0.58
EIF3C-210ENST00000566519 RTL5Q5HYW3 569 aaPredicted RBP18.65■□□□□ 0.58
EIF3C-210ENST00000566519 KLRG1Q96E93 195 aa18.65■□□□□ 0.58
EIF3C-210ENST00000566519 ATP6V0A2Q9Y487 856 aa18.65■□□□□ 0.58
EIF3C-210ENST00000566519 GNAI1P63096 354 aa18.64■□□□□ 0.57
EIF3C-210ENST00000566519 HSP90AB3PQ58FF7 597 aa18.64■□□□□ 0.57
EIF3C-210ENST00000566519 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
EIF3C-210ENST00000566519 RNF123Q5XPI4 1314 aa18.64■□□□□ 0.57
EIF3C-210ENST00000566519 SH3TC1Q8TE82 1336 aa18.64■□□□□ 0.57
EIF3C-210ENST00000566519 ZNF316A6NFI3 1004 aaPredicted RBP18.63■□□□□ 0.57
EIF3C-210ENST00000566519 JMYQ8N9B5 988 aa18.63■□□□□ 0.57
EIF3C-210ENST00000566519 HYPKQ9NX55 129 aa18.63■□□□□ 0.57
EIF3C-210ENST00000566519 ITGBL1O95965 494 aaPredicted RBP18.62■□□□□ 0.57
EIF3C-210ENST00000566519 AOC3Q16853 763 aa18.62■□□□□ 0.57
EIF3C-210ENST00000566519 CC2D2BQ6DHV5 1058 aa18.62■□□□□ 0.57
EIF3C-210ENST00000566519 CHADLQ6NUI6 762 aa18.62■□□□□ 0.57
EIF3C-210ENST00000566519 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
EIF3C-210ENST00000566519 CELF1Q92879 486 aaKnown RBP18.62■□□□□ 0.57
EIF3C-210ENST00000566519 PASKQ96RG2 1323 aa18.61■□□□□ 0.57
EIF3C-210ENST00000566519 TRIM28Q13263 835 aaKnown RBP18.61■□□□□ 0.57
EIF3C-210ENST00000566519 G2E3Q7L622 706 aa18.61■□□□□ 0.57
EIF3C-210ENST00000566519 RTFDC1Q9BY42 306 aaPredicted RBP18.61■□□□□ 0.57
EIF3C-210ENST00000566519 SCNN1DP51172 638 aa18.6■□□□□ 0.57
EIF3C-210ENST00000566519 FMR1Q06787 632 aaKnown RBP eCLIP18.6■□□□□ 0.57
EIF3C-210ENST00000566519 SP8Q8IXZ3 490 aa18.6■□□□□ 0.57
EIF3C-210ENST00000566519 SCN9AQ15858 1988 aa18.6■□□□□ 0.57
EIF3C-210ENST00000566519 EPHX2P34913 555 aa18.59■□□□□ 0.57
EIF3C-210ENST00000566519 EPS15P42566 896 aa18.59■□□□□ 0.57
EIF3C-210ENST00000566519 GRAPQ13588 217 aa18.59■□□□□ 0.57
EIF3C-210ENST00000566519 SF3B3Q15393 1217 aaKnown RBP18.59■□□□□ 0.57
EIF3C-210ENST00000566519 GPC2Q8N158 579 aa18.59■□□□□ 0.57
EIF3C-210ENST00000566519 LARGE2Q8N3Y3 721 aa18.59■□□□□ 0.57
EIF3C-210ENST00000566519 GRAPLQ8TC17 118 aaPredicted RBP18.59■□□□□ 0.57
EIF3C-210ENST00000566519 SPINK5Q9NQ38 1064 aaPredicted RBP18.59■□□□□ 0.57
EIF3C-210ENST00000566519 SPEF2Q9C093 1822 aa18.58■□□□□ 0.57
EIF3C-210ENST00000566519 BBOX1O75936 387 aa18.58■□□□□ 0.56
EIF3C-210ENST00000566519 CCDC27Q2M243 656 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms