RNA–Protein interactions for RNA: ENST00000566343.5

ERVK13-1-204, Transcript of endogenous retrovirus group K13 member 1, humanhuman

TSL 4 BASIC

Gene ERVK13-1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK13-1-204ENST00000566343 SENP3-EIF4A1A0A087X0R7 540 aa18.38■□□□□ 0.53
ERVK13-1-204ENST00000566343 HOXA10P31260 410 aaPredicted RBP18.38■□□□□ 0.53
ERVK13-1-204ENST00000566343 PRELPP51888 382 aa18.38■□□□□ 0.53
ERVK13-1-204ENST00000566343 UTP14AQ9BVJ6 771 aaKnown RBP18.38■□□□□ 0.53
ERVK13-1-204ENST00000566343 TOMM70O94826 608 aa18.37■□□□□ 0.53
ERVK13-1-204ENST00000566343 AIMP1Q12904 312 aaKnown RBP18.37■□□□□ 0.53
ERVK13-1-204ENST00000566343 TCIRG1Q13488 830 aa18.37■□□□□ 0.53
ERVK13-1-204ENST00000566343 PLBD2Q8NHP8 589 aa18.37■□□□□ 0.53
ERVK13-1-204ENST00000566343 RPGRQ92834 1020 aaKnown RBP18.37■□□□□ 0.53
ERVK13-1-204ENST00000566343 NMRK2Q9NPI5 230 aa18.37■□□□□ 0.53
ERVK13-1-204ENST00000566343 ZNF219Q9P2Y4 722 aaPredicted RBP18.37■□□□□ 0.53
ERVK13-1-204ENST00000566343 GLTPD2A6NH11 291 aa18.36■□□□□ 0.53
ERVK13-1-204ENST00000566343 SLC10A5Q5PT55 438 aa18.36■□□□□ 0.53
ERVK13-1-204ENST00000566343 CC2D2BQ6DHV5 1058 aa18.36■□□□□ 0.53
ERVK13-1-204ENST00000566343 RTKN2Q8IZC4 609 aa18.36■□□□□ 0.53
ERVK13-1-204ENST00000566343 DICER1Q9UPY3 1922 aaKnown RBP18.36■□□□□ 0.53
ERVK13-1-204ENST00000566343 IL16Q14005 1332 aa18.35■□□□□ 0.53
ERVK13-1-204ENST00000566343 GRIPAP1Q4V328 841 aa18.35■□□□□ 0.53
ERVK13-1-204ENST00000566343 ANKRD13DQ6ZTN6 518 aa18.35■□□□□ 0.53
ERVK13-1-204ENST00000566343 NLRP10Q86W26 655 aa18.35■□□□□ 0.53
ERVK13-1-204ENST00000566343 CRAMP1Q96RY5 1269 aa18.35■□□□□ 0.53
ERVK13-1-204ENST00000566343 CCDC88AQ3V6T2 1871 aa18.35■□□□□ 0.53
ERVK13-1-204ENST00000566343 FKBP4Q02790 459 aaKnown RBP eCLIP18.34■□□□□ 0.53
ERVK13-1-204ENST00000566343 WWC1Q8IX03 1113 aa18.34■□□□□ 0.53
ERVK13-1-204ENST00000566343 RBM17Q96I25 401 aaKnown RBP18.34■□□□□ 0.53
ERVK13-1-204ENST00000566343 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
ERVK13-1-204ENST00000566343 DPY19L2Q6NUT2 758 aa18.33■□□□□ 0.52
ERVK13-1-204ENST00000566343 C16orf71Q8IYS4 520 aaPredicted RBP18.33■□□□□ 0.52
ERVK13-1-204ENST00000566343 RBM46Q8TBY0 533 aaKnown RBP18.33■□□□□ 0.52
ERVK13-1-204ENST00000566343 SH3TC1Q8TE82 1336 aa18.32■□□□□ 0.52
ERVK13-1-204ENST00000566343 HSPA6P17066 643 aa18.32■□□□□ 0.52
ERVK13-1-204ENST00000566343 CCDC30Q5VVM6 783 aa18.32■□□□□ 0.52
ERVK13-1-204ENST00000566343 SNED1Q8TER0 1413 aa18.32■□□□□ 0.52
ERVK13-1-204ENST00000566343 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
ERVK13-1-204ENST00000566343 TRIM28Q13263 835 aaKnown RBP18.31■□□□□ 0.52
ERVK13-1-204ENST00000566343 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
ERVK13-1-204ENST00000566343 PSMD1Q99460 953 aa18.31■□□□□ 0.52
ERVK13-1-204ENST00000566343 ISCA1Q9BUE6 129 aa18.31■□□□□ 0.52
ERVK13-1-204ENST00000566343 TRMT112Q9UI30 125 aaKnown RBP18.31■□□□□ 0.52
ERVK13-1-204ENST00000566343 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
ERVK13-1-204ENST00000566343 FSTL1Q12841 308 aa18.3■□□□□ 0.52
ERVK13-1-204ENST00000566343 WDR90Q96KV7 1748 aa18.29■□□□□ 0.52
ERVK13-1-204ENST00000566343 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
ERVK13-1-204ENST00000566343 RRAGCQ9HB90 399 aa18.29■□□□□ 0.52
ERVK13-1-204ENST00000566343 PPEF1O14829 653 aaPredicted RBP18.28■□□□□ 0.52
ERVK13-1-204ENST00000566343 DDX58O95786 925 aaKnown RBP18.28■□□□□ 0.52
ERVK13-1-204ENST00000566343 C3orf67Q6ZVT6 689 aa18.28■□□□□ 0.52
ERVK13-1-204ENST00000566343 WDR63Q8IWG1 891 aa18.28■□□□□ 0.52
ERVK13-1-204ENST00000566343 TMX4Q9H1E5 349 aaPredicted RBP18.28■□□□□ 0.52
ERVK13-1-204ENST00000566343 RIC3Q7Z5B4 369 aa18.27■□□□□ 0.52
ERVK13-1-204ENST00000566343 TSR2Q969E8 191 aaKnown RBP18.27■□□□□ 0.52
ERVK13-1-204ENST00000566343 BBOX1O75936 387 aa18.26■□□□□ 0.51
ERVK13-1-204ENST00000566343 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
ERVK13-1-204ENST00000566343 IARSP41252 1262 aaKnown RBP18.26■□□□□ 0.51
ERVK13-1-204ENST00000566343 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
ERVK13-1-204ENST00000566343 SYNE4Q8N205 404 aa18.26■□□□□ 0.51
ERVK13-1-204ENST00000566343 STK31Q9BXU1 1019 aa18.26■□□□□ 0.51
ERVK13-1-204ENST00000566343 ZNF277Q9NRM2 450 aaPredicted RBP18.26■□□□□ 0.51
ERVK13-1-204ENST00000566343 ATP6V0A2Q9Y487 856 aa18.26■□□□□ 0.51
ERVK13-1-204ENST00000566343 LAMB2P55268 1798 aa18.26■□□□□ 0.51
ERVK13-1-204ENST00000566343 ABCC4O15439 1325 aa18.25■□□□□ 0.51
ERVK13-1-204ENST00000566343 HCLS1P14317 486 aaPredicted RBP18.25■□□□□ 0.51
ERVK13-1-204ENST00000566343 APLP1P51693 650 aa18.25■□□□□ 0.51
ERVK13-1-204ENST00000566343 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
ERVK13-1-204ENST00000566343 DDX46Q7L014 1031 aaKnown RBP18.25■□□□□ 0.51
ERVK13-1-204ENST00000566343 TMC4Q7Z404 712 aa18.25■□□□□ 0.51
ERVK13-1-204ENST00000566343 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
ERVK13-1-204ENST00000566343 SMC1BQ8NDV3 1235 aa18.25■□□□□ 0.51
ERVK13-1-204ENST00000566343 PHAXQ9H814 394 aaKnown RBP18.25■□□□□ 0.51
ERVK13-1-204ENST00000566343 ATP5J2-PTCD1G3V325 749 aa18.24■□□□□ 0.51
ERVK13-1-204ENST00000566343 L3MBTL3Q96JM7 780 aaPredicted RBP18.24■□□□□ 0.51
ERVK13-1-204ENST00000566343 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
ERVK13-1-204ENST00000566343 DDX60Q8IY21 1712 aaKnown RBP18.23■□□□□ 0.51
ERVK13-1-204ENST00000566343 IQCA1LA6NCM1 817 aa18.23■□□□□ 0.51
ERVK13-1-204ENST00000566343 GRAPQ13588 217 aa18.23■□□□□ 0.51
ERVK13-1-204ENST00000566343 CCDC191Q8NCU4 936 aa18.23■□□□□ 0.51
ERVK13-1-204ENST00000566343 GRAPLQ8TC17 118 aaPredicted RBP18.23■□□□□ 0.51
ERVK13-1-204ENST00000566343 JDP2Q8WYK2 163 aa18.23■□□□□ 0.51
ERVK13-1-204ENST00000566343 VPS33BQ9H267 617 aa18.23■□□□□ 0.51
ERVK13-1-204ENST00000566343 FZD9O00144 591 aa18.22■□□□□ 0.51
ERVK13-1-204ENST00000566343 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
ERVK13-1-204ENST00000566343 SP8Q8IXZ3 490 aa18.22■□□□□ 0.51
ERVK13-1-204ENST00000566343 ZBTB38Q8NAP3 1195 aaPredicted RBP18.22■□□□□ 0.51
ERVK13-1-204ENST00000566343 FAM89AQ96GI7 184 aa18.22■□□□□ 0.51
ERVK13-1-204ENST00000566343 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
ERVK13-1-204ENST00000566343 POTECB2RU33 542 aa18.21■□□□□ 0.51
ERVK13-1-204ENST00000566343 DDNO94850 711 aaPredicted RBP18.21■□□□□ 0.51
ERVK13-1-204ENST00000566343 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
ERVK13-1-204ENST00000566343 SUPT20HQ8NEM7 779 aa18.21■□□□□ 0.51
ERVK13-1-204ENST00000566343 SCN4AP35499 1836 aa18.21■□□□□ 0.51
ERVK13-1-204ENST00000566343 IRS4O14654 1257 aaPredicted RBP18.2■□□□□ 0.5
ERVK13-1-204ENST00000566343 KSR2Q6VAB6 950 aa18.2■□□□□ 0.5
ERVK13-1-204ENST00000566343 MYD88Q99836 296 aa18.2■□□□□ 0.5
ERVK13-1-204ENST00000566343 RTFDC1Q9BY42 306 aaPredicted RBP18.2■□□□□ 0.5
ERVK13-1-204ENST00000566343 CWC25Q9NXE8 425 aaPredicted RBP18.2■□□□□ 0.5
ERVK13-1-204ENST00000566343 LRRC37AA6NMS7 1700 aa18.19■□□□□ 0.5
ERVK13-1-204ENST00000566343 PCCAP05165 728 aaPredicted RBP18.19■□□□□ 0.5
ERVK13-1-204ENST00000566343 GPC2Q8N158 579 aa18.19■□□□□ 0.5
ERVK13-1-204ENST00000566343 LARGE2Q8N3Y3 721 aa18.19■□□□□ 0.5
ERVK13-1-204ENST00000566343 MYH16Q9H6N6 1097 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms