RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 F13A1P00488 732 aa13.1□□□□□ -0.31
TCF4-232ENST00000566286 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
TCF4-232ENST00000566286 TTLL12Q14166 644 aaPredicted RBP13.1□□□□□ -0.31
TCF4-232ENST00000566286 PRDM4Q9UKN5 801 aa13.1□□□□□ -0.31
TCF4-232ENST00000566286 SMC3Q9UQE7 1217 aa13.1□□□□□ -0.31
TCF4-232ENST00000566286 SNX14Q9Y5W7 946 aa13.1□□□□□ -0.31
TCF4-232ENST00000566286 SBNO1A3KN83 1393 aa13.1□□□□□ -0.31
TCF4-232ENST00000566286 TTC21AQ8NDW8 1320 aa13.1□□□□□ -0.31
TCF4-232ENST00000566286 PIK3C2AO00443 1686 aa13.1□□□□□ -0.31
TCF4-232ENST00000566286 SYT1P21579 422 aa13.1□□□□□ -0.31
TCF4-232ENST00000566286 CNTROBQ8N137 903 aa13.1□□□□□ -0.31
TCF4-232ENST00000566286 MAP2K5Q13163 448 aa13.09□□□□□ -0.31
TCF4-232ENST00000566286 CAMK2BQ13554 666 aa13.09□□□□□ -0.31
TCF4-232ENST00000566286 TTC12Q9H892 705 aaPredicted RBP13.09□□□□□ -0.31
TCF4-232ENST00000566286 BABAM1Q9NWV8 329 aa13.09□□□□□ -0.31
TCF4-232ENST00000566286 AK2P54819 239 aa13.09□□□□□ -0.31
TCF4-232ENST00000566286 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
TCF4-232ENST00000566286 FUCA2Q9BTY2 467 aa13.09□□□□□ -0.31
TCF4-232ENST00000566286 LSG1Q9H089 658 aaKnown RBP13.09□□□□□ -0.31
TCF4-232ENST00000566286 USP44Q9H0E7 712 aa13.09□□□□□ -0.31
TCF4-232ENST00000566286 IL25Q9H293 177 aa13.09□□□□□ -0.31
TCF4-232ENST00000566286 IL1RAPL2Q9NP60 686 aa13.09□□□□□ -0.31
TCF4-232ENST00000566286 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
TCF4-232ENST00000566286 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.32
TCF4-232ENST00000566286 NPHP4O75161 1426 aaPredicted RBP13.08□□□□□ -0.32
TCF4-232ENST00000566286 CRYBG1Q9Y4K1 1723 aa13.08□□□□□ -0.32
TCF4-232ENST00000566286 CARNS1A5YM72 827 aa13.08□□□□□ -0.32
TCF4-232ENST00000566286 GOLGA6L6A8MZA4 724 aa13.08□□□□□ -0.32
TCF4-232ENST00000566286 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
TCF4-232ENST00000566286 PI4K2BQ8TCG2 481 aa13.08□□□□□ -0.32
TCF4-232ENST00000566286 KIF1BPQ96EK5 621 aa13.08□□□□□ -0.32
TCF4-232ENST00000566286 ZNF830Q96NB3 372 aaPredicted RBP13.08□□□□□ -0.32
TCF4-232ENST00000566286 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
TCF4-232ENST00000566286 CHAF1AQ13111 956 aaPredicted RBP13.07□□□□□ -0.32
TCF4-232ENST00000566286 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
TCF4-232ENST00000566286 RHPN1Q8TCX5 695 aa13.07□□□□□ -0.32
TCF4-232ENST00000566286 DIAPH3Q9NSV4 1193 aa13.07□□□□□ -0.32
TCF4-232ENST00000566286 IVNS1ABPQ9Y6Y0 642 aa13.07□□□□□ -0.32
TCF4-232ENST00000566286 MARF1Q9Y4F3 1742 aaKnown RBP13.07□□□□□ -0.32
TCF4-232ENST00000566286 FIBPO43427 364 aa13.07□□□□□ -0.32
TCF4-232ENST00000566286 SURF6O75683 361 aaKnown RBP13.07□□□□□ -0.32
TCF4-232ENST00000566286 HSP90AB4PQ58FF6 505 aa13.07□□□□□ -0.32
TCF4-232ENST00000566286 RUFY3Q7L099 469 aa13.07□□□□□ -0.32
TCF4-232ENST00000566286 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
TCF4-232ENST00000566286 SH2B1Q9NRF2 756 aaPredicted RBP13.07□□□□□ -0.32
TCF4-232ENST00000566286 USP54Q70EL1 1684 aa13.07□□□□□ -0.32
TCF4-232ENST00000566286 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
TCF4-232ENST00000566286 RUFY2Q8WXA3 655 aa13.06□□□□□ -0.32
TCF4-232ENST00000566286 UTP14CQ5TAP6 766 aaKnown RBP13.06□□□□□ -0.32
TCF4-232ENST00000566286 SND1Q7KZF4 910 aaKnown RBP eCLIP13.06□□□□□ -0.32
TCF4-232ENST00000566286 PPP1R42Q7Z4L9 355 aa13.06□□□□□ -0.32
TCF4-232ENST00000566286 KIAA1524Q8TCG1 905 aa13.06□□□□□ -0.32
TCF4-232ENST00000566286 CCDC192P0DO97 292 aa13.05□□□□□ -0.32
TCF4-232ENST00000566286 VPS53Q5VIR6 699 aa13.05□□□□□ -0.32
TCF4-232ENST00000566286 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
TCF4-232ENST00000566286 EYA1Q99502 592 aa13.05□□□□□ -0.32
TCF4-232ENST00000566286 TM6SF1Q9BZW5 370 aa13.05□□□□□ -0.32
TCF4-232ENST00000566286 TTC41PQ6P2S7 1318 aa13.05□□□□□ -0.32
TCF4-232ENST00000566286 USP42Q9H9J4 1324 aaKnown RBP13.05□□□□□ -0.32
TCF4-232ENST00000566286 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
TCF4-232ENST00000566286 CASTP20810 708 aaKnown RBP13.04□□□□□ -0.32
TCF4-232ENST00000566286 GJB2P29033 226 aa13.04□□□□□ -0.32
TCF4-232ENST00000566286 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
TCF4-232ENST00000566286 GIMAP6Q6P9H5 292 aa13.04□□□□□ -0.32
TCF4-232ENST00000566286 MPNDQ8N594 471 aa13.04□□□□□ -0.32
TCF4-232ENST00000566286 FBXO22Q8NEZ5 403 aa13.04□□□□□ -0.32
TCF4-232ENST00000566286 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
TCF4-232ENST00000566286 NWD1Q149M9 1564 aa13.04□□□□□ -0.32
TCF4-232ENST00000566286 SOX12O15370 315 aa13.04□□□□□ -0.32
TCF4-232ENST00000566286 GLRX3O76003 335 aaKnown RBP13.04□□□□□ -0.32
TCF4-232ENST00000566286 MAP4K4O95819 1239 aaPredicted RBP13.04□□□□□ -0.32
TCF4-232ENST00000566286 AMPHP49418 695 aa13.04□□□□□ -0.32
TCF4-232ENST00000566286 MTMR6Q9Y217 621 aa13.04□□□□□ -0.32
TCF4-232ENST00000566286 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
TCF4-232ENST00000566286 TAF7Q15545 349 aaPredicted RBP13.03□□□□□ -0.32
TCF4-232ENST00000566286 SH3D19Q5HYK7 790 aa13.03□□□□□ -0.32
TCF4-232ENST00000566286 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
TCF4-232ENST00000566286 PDRG1Q9NUG6 133 aa13.03□□□□□ -0.32
TCF4-232ENST00000566286 DNM1Q05193 864 aaKnown RBP13.03□□□□□ -0.32
TCF4-232ENST00000566286 DMTNQ08495 405 aa13.03□□□□□ -0.32
TCF4-232ENST00000566286 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
TCF4-232ENST00000566286 GIGYF2Q6Y7W6 1299 aaKnown RBP13.03□□□□□ -0.32
TCF4-232ENST00000566286 CCDC83Q8IWF9 413 aa13.03□□□□□ -0.32
TCF4-232ENST00000566286 C17orf53Q8N3J3 647 aaPredicted RBP13.03□□□□□ -0.32
TCF4-232ENST00000566286 RBM33Q96EV2 1170 aaKnown RBP13.03□□□□□ -0.32
TCF4-232ENST00000566286 CYP46A1Q9Y6A2 500 aa13.03□□□□□ -0.32
TCF4-232ENST00000566286 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
TCF4-232ENST00000566286 FAM200AQ8TCP9 573 aa13.02□□□□□ -0.33
TCF4-232ENST00000566286 KCNB2Q92953 911 aa13.02□□□□□ -0.33
TCF4-232ENST00000566286 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.33
TCF4-232ENST00000566286 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
TCF4-232ENST00000566286 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
TCF4-232ENST00000566286 SPG7Q9UQ90 795 aa13.01□□□□□ -0.33
TCF4-232ENST00000566286 ELP1O95163 1332 aa13.01□□□□□ -0.33
TCF4-232ENST00000566286 CCDC171Q6TFL3 1326 aa13.01□□□□□ -0.33
TCF4-232ENST00000566286 LARGE1O95461 756 aa13.01□□□□□ -0.33
TCF4-232ENST00000566286 KRT85P78386 507 aa13.01□□□□□ -0.33
TCF4-232ENST00000566286 MAP3K11Q16584 847 aa13.01□□□□□ -0.33
TCF4-232ENST00000566286 OXER1Q8TDS5 423 aa13.01□□□□□ -0.33
TCF4-232ENST00000566286 GPATCH3Q96I76 525 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms