RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 SLC39A13Q96H72 371 aa13.39□□□□□ -0.27
UBFD1-205ENST00000566136 DUSP9Q99956 384 aaKnown RBP13.39□□□□□ -0.27
UBFD1-205ENST00000566136 ICMTO60725 284 aa13.39□□□□□ -0.27
UBFD1-205ENST00000566136 GUCA2AQ02747 115 aa13.39□□□□□ -0.27
UBFD1-205ENST00000566136 DNMT3AQ9Y6K1 912 aaPredicted RBP13.39□□□□□ -0.27
UBFD1-205ENST00000566136 PTMAP06454 111 aaKnown RBP13.38□□□□□ -0.27
UBFD1-205ENST00000566136 UBE4AQ14139 1066 aa13.38□□□□□ -0.27
UBFD1-205ENST00000566136 SLC43A3Q8NBI5 491 aa13.38□□□□□ -0.27
UBFD1-205ENST00000566136 EMILIN1Q9Y6C2 1016 aa13.38□□□□□ -0.27
UBFD1-205ENST00000566136 SOCS7O14512 581 aa13.38□□□□□ -0.27
UBFD1-205ENST00000566136 MAP3K13O43283 966 aa13.38□□□□□ -0.27
UBFD1-205ENST00000566136 FOXK1P85037 733 aa13.38□□□□□ -0.27
UBFD1-205ENST00000566136 PXYLP1Q8TE99 480 aa13.38□□□□□ -0.27
UBFD1-205ENST00000566136 MYO5BQ9ULV0 1848 aa13.38□□□□□ -0.27
UBFD1-205ENST00000566136 FAM193AP78312 1265 aa13.37□□□□□ -0.27
UBFD1-205ENST00000566136 TMC7Q7Z402 723 aa13.37□□□□□ -0.27
UBFD1-205ENST00000566136 PNISRQ8TF01 805 aaKnown RBP13.37□□□□□ -0.27
UBFD1-205ENST00000566136 MAP3K7O43318 606 aa13.37□□□□□ -0.27
UBFD1-205ENST00000566136 GNALP38405 381 aa13.37□□□□□ -0.27
UBFD1-205ENST00000566136 NCOA4Q13772 614 aa13.37□□□□□ -0.27
UBFD1-205ENST00000566136 SYMPKQ92797 1274 aaKnown RBP13.37□□□□□ -0.27
UBFD1-205ENST00000566136 TESK2Q96S53 571 aa13.37□□□□□ -0.27
UBFD1-205ENST00000566136 SKIP12755 728 aa13.36□□□□□ -0.27
UBFD1-205ENST00000566136 ZNF76P36508 570 aa13.36□□□□□ -0.27
UBFD1-205ENST00000566136 MAPK8P45983 427 aa13.36□□□□□ -0.27
UBFD1-205ENST00000566136 ARID5AQ03989 594 aa13.36□□□□□ -0.27
UBFD1-205ENST00000566136 FAM200AQ8TCP9 573 aa13.36□□□□□ -0.27
UBFD1-205ENST00000566136 NEUROD6Q96NK8 337 aa13.36□□□□□ -0.27
UBFD1-205ENST00000566136 DPYDQ12882 1025 aa13.36□□□□□ -0.27
UBFD1-205ENST00000566136 FERMT3Q86UX7 667 aa13.36□□□□□ -0.27
UBFD1-205ENST00000566136 RIMS2Q9UQ26 1411 aa13.36□□□□□ -0.27
UBFD1-205ENST00000566136 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 MYBBP1AQ9BQG0 1328 aaKnown RBP13.35□□□□□ -0.27
UBFD1-205ENST00000566136 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 KCNA6P17658 529 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 POLD1P28340 1107 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 ZNF280DQ6N043 979 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 PODNQ7Z5L7 613 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 GTF3C2Q8WUA4 911 aaPredicted RBP13.35□□□□□ -0.27
UBFD1-205ENST00000566136 KIF12Q96FN5 646 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 CTDP1Q9Y5B0 961 aaPredicted RBP13.35□□□□□ -0.27
UBFD1-205ENST00000566136 XIRP1Q702N8 1843 aaKnown RBP13.35□□□□□ -0.27
UBFD1-205ENST00000566136 LAMC1P11047 1609 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 JAMLQ86YT9 394 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 VTI1BQ9UEU0 232 aa13.35□□□□□ -0.27
UBFD1-205ENST00000566136 CLTCL1P53675 1640 aa13.34□□□□□ -0.27
UBFD1-205ENST00000566136 EXOC5O00471 708 aa13.34□□□□□ -0.27
UBFD1-205ENST00000566136 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
UBFD1-205ENST00000566136 TRPM2O94759 1503 aa13.34□□□□□ -0.27
UBFD1-205ENST00000566136 FGRP09769 529 aa13.34□□□□□ -0.27
UBFD1-205ENST00000566136 NR6A1Q15406 480 aa13.34□□□□□ -0.27
UBFD1-205ENST00000566136 ANKRD13DQ6ZTN6 518 aa13.34□□□□□ -0.27
UBFD1-205ENST00000566136 PURBQ96QR8 312 aaKnown RBP13.34□□□□□ -0.27
UBFD1-205ENST00000566136 TMEM94Q12767 1356 aa13.34□□□□□ -0.27
UBFD1-205ENST00000566136 DPY19L2Q6NUT2 758 aa13.33□□□□□ -0.28
UBFD1-205ENST00000566136 ARHGEF10LQ9HCE6 1279 aa13.33□□□□□ -0.28
UBFD1-205ENST00000566136 INTUQ9ULD6 942 aa13.33□□□□□ -0.28
UBFD1-205ENST00000566136 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
UBFD1-205ENST00000566136 PLEKHG1Q9ULL1 1385 aa13.32□□□□□ -0.28
UBFD1-205ENST00000566136 CDKN1CP49918 316 aaPredicted RBP13.32□□□□□ -0.28
UBFD1-205ENST00000566136 CC2D1BQ5T0F9 858 aaKnown RBP13.32□□□□□ -0.28
UBFD1-205ENST00000566136 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
UBFD1-205ENST00000566136 NEFMP07197 916 aa13.32□□□□□ -0.28
UBFD1-205ENST00000566136 HDGFP51858 240 aaKnown RBP13.32□□□□□ -0.28
UBFD1-205ENST00000566136 RGL4Q8IZJ4 473 aa13.32□□□□□ -0.28
UBFD1-205ENST00000566136 BRINP2Q9C0B6 783 aa13.32□□□□□ -0.28
UBFD1-205ENST00000566136 PANK3Q9H999 370 aa13.32□□□□□ -0.28
UBFD1-205ENST00000566136 PER1O15534 1290 aaPredicted RBP13.31□□□□□ -0.28
UBFD1-205ENST00000566136 TMF1P82094 1093 aa13.31□□□□□ -0.28
UBFD1-205ENST00000566136 XPCQ01831 940 aaPredicted RBP13.31□□□□□ -0.28
UBFD1-205ENST00000566136 DYTNA2CJ06 578 aa13.31□□□□□ -0.28
UBFD1-205ENST00000566136 OCLNQ16625 522 aa13.31□□□□□ -0.28
UBFD1-205ENST00000566136 PADI6Q6TGC4 694 aa13.31□□□□□ -0.28
UBFD1-205ENST00000566136 SCYL1Q96KG9 808 aa13.31□□□□□ -0.28
UBFD1-205ENST00000566136 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
UBFD1-205ENST00000566136 SMG6Q86US8 1419 aaKnown RBP13.3□□□□□ -0.28
UBFD1-205ENST00000566136 HMGB1P1B2RPK0 211 aaPredicted RBP13.3□□□□□ -0.28
UBFD1-205ENST00000566136 C21orf2O43822 256 aa13.3□□□□□ -0.28
UBFD1-205ENST00000566136 XRCC5P13010 732 aaKnown RBP13.3□□□□□ -0.28
UBFD1-205ENST00000566136 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
UBFD1-205ENST00000566136 TTC30BQ8N4P2 665 aa13.3□□□□□ -0.28
UBFD1-205ENST00000566136 C1orf131Q8NDD1 294 aaKnown RBP13.3□□□□□ -0.28
UBFD1-205ENST00000566136 QTRT2Q9H974 415 aaKnown RBP13.3□□□□□ -0.28
UBFD1-205ENST00000566136 FANCLQ9NW38 375 aa13.3□□□□□ -0.28
UBFD1-205ENST00000566136 PARD3Q8TEW0 1356 aa13.3□□□□□ -0.28
UBFD1-205ENST00000566136 CLDN10P78369 228 aa13.3□□□□□ -0.28
UBFD1-205ENST00000566136 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.3□□□□□ -0.28
UBFD1-205ENST00000566136 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
UBFD1-205ENST00000566136 LRPPRCP42704 1394 aaKnown RBP13.29□□□□□ -0.28
UBFD1-205ENST00000566136 HCLS1P14317 486 aaPredicted RBP13.29□□□□□ -0.28
UBFD1-205ENST00000566136 SAFB2Q14151 953 aaKnown RBP eCLIP13.29□□□□□ -0.28
UBFD1-205ENST00000566136 ZSCAN29Q8IWY8 852 aaPredicted RBP13.29□□□□□ -0.28
UBFD1-205ENST00000566136 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
UBFD1-205ENST00000566136 INO80BQ9C086 356 aaPredicted RBP13.29□□□□□ -0.28
UBFD1-205ENST00000566136 SALL2Q9Y467 1007 aaPredicted RBP13.29□□□□□ -0.28
UBFD1-205ENST00000566136 MED1Q15648 1581 aaPredicted RBP13.29□□□□□ -0.28
UBFD1-205ENST00000566136 FAM221BA6H8Z2 402 aa13.29□□□□□ -0.28
UBFD1-205ENST00000566136 C2orf72A6NCS6 295 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms