RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 ZNF541Q9H0D2 1346 aa13.82□□□□□ -0.2
NSMCE1-211ENST00000566087 SCN4AP35499 1836 aa13.81□□□□□ -0.2
NSMCE1-211ENST00000566087 PRAMEF22A3QJZ6 481 aa13.81□□□□□ -0.2
NSMCE1-211ENST00000566087 ERVV-1B6SEH8 477 aa13.81□□□□□ -0.2
NSMCE1-211ENST00000566087 EIF2S2P20042 333 aaKnown RBP13.81□□□□□ -0.2
NSMCE1-211ENST00000566087 VEGFBP49765 207 aa13.81□□□□□ -0.2
NSMCE1-211ENST00000566087 ZNF277Q9NRM2 450 aaPredicted RBP13.81□□□□□ -0.2
NSMCE1-211ENST00000566087 IQCA1LA6NCM1 817 aa13.8□□□□□ -0.2
NSMCE1-211ENST00000566087 CENPBP07199 599 aaPredicted RBP13.8□□□□□ -0.2
NSMCE1-211ENST00000566087 SOGA3Q5TF21 947 aa13.8□□□□□ -0.2
NSMCE1-211ENST00000566087 NBPF5PQ86XG9 351 aaPredicted RBP13.8□□□□□ -0.2
NSMCE1-211ENST00000566087 C7orf43Q8WVR3 580 aa13.8□□□□□ -0.2
NSMCE1-211ENST00000566087 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
NSMCE1-211ENST00000566087 KDM3BQ7LBC6 1761 aa13.8□□□□□ -0.2
NSMCE1-211ENST00000566087 TMEM88BA6NKF7 163 aa13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 FAM177BA6PVY3 158 aa13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 NBPF26B4DH59 902 aa13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 ITGBL1O95965 494 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 MYL6BP14649 208 aa13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 CCDC93Q567U6 631 aa13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 NBPF10Q6P3W6 841 aaKnown RBP13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 TPTE2Q6XPS3 522 aa13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 WDR63Q8IWG1 891 aa13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 NBPF15Q8N660 670 aa13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 AIDAQ96BJ3 306 aa13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 L3MBTL3Q96JM7 780 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-211ENST00000566087 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
NSMCE1-211ENST00000566087 GTF2E1P29083 439 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-211ENST00000566087 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-211ENST00000566087 WWC1Q8IX03 1113 aa13.78□□□□□ -0.2
NSMCE1-211ENST00000566087 PRDM10Q9NQV6 1147 aa13.78□□□□□ -0.2
NSMCE1-211ENST00000566087 MBIPQ9NS73 344 aa13.78□□□□□ -0.2
NSMCE1-211ENST00000566087 DBF4Q9UBU7 674 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-211ENST00000566087 IL16Q14005 1332 aa13.78□□□□□ -0.2
NSMCE1-211ENST00000566087 NPR1P16066 1061 aa13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 EPHX2P34913 555 aa13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 LBX1P52954 281 aa13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 FKBP4Q02790 459 aaKnown RBP eCLIP13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 DUSP27Q5VZP5 1158 aa13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 RNF123Q5XPI4 1314 aa13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 MAP1SQ66K74 1059 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 ADAMTSL1Q8N6G6 1762 aa13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 NYXQ9GZU5 481 aa13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 DDX21Q9NR30 783 aaKnown RBP eCLIP13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 HYPKQ9NX55 129 aa13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 HACL1Q9UJ83 578 aa13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 NIP7Q9Y221 180 aaKnown RBP eCLIP13.77□□□□□ -0.21
NSMCE1-211ENST00000566087 MAP3K15Q6ZN16 1313 aa13.76□□□□□ -0.21
NSMCE1-211ENST00000566087 HSP90AB3PQ58FF7 597 aa13.76□□□□□ -0.21
NSMCE1-211ENST00000566087 HNRNPUQ00839 825 aaKnown RBP eCLIP13.75□□□□□ -0.21
NSMCE1-211ENST00000566087 CCDC30Q5VVM6 783 aa13.75□□□□□ -0.21
NSMCE1-211ENST00000566087 CNTROBQ8N137 903 aa13.75□□□□□ -0.21
NSMCE1-211ENST00000566087 WBP1LQ9NX94 342 aa13.75□□□□□ -0.21
NSMCE1-211ENST00000566087 LAMB4A4D0S4 1761 aa13.75□□□□□ -0.21
NSMCE1-211ENST00000566087 IARSP41252 1262 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-211ENST00000566087 HLFQ16534 295 aa13.74□□□□□ -0.21
NSMCE1-211ENST00000566087 DEFB115Q30KQ5 88 aa13.74□□□□□ -0.21
NSMCE1-211ENST00000566087 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-211ENST00000566087 PPP1R42Q7Z4L9 355 aa13.74□□□□□ -0.21
NSMCE1-211ENST00000566087 SYNE4Q8N205 404 aa13.74□□□□□ -0.21
NSMCE1-211ENST00000566087 MYH16Q9H6N6 1097 aa13.74□□□□□ -0.21
NSMCE1-211ENST00000566087 KLRG2A4D1S0 409 aaPredicted RBP13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 FZD9O00144 591 aa13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 HSPA8P11142 646 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 FMR1Q06787 632 aaKnown RBP eCLIP13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 GOLGA2Q08379 1002 aa13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 PARP10Q53GL7 1025 aa13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 SLC51AQ86UW1 340 aa13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 RTKN2Q8IZC4 609 aa13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 ABT1Q9ULW3 272 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
NSMCE1-211ENST00000566087 COL4A5P29400 1685 aa13.72□□□□□ -0.21
NSMCE1-211ENST00000566087 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-211ENST00000566087 RASSF10A6NK89 507 aa13.72□□□□□ -0.21
NSMCE1-211ENST00000566087 DDX58O95786 925 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-211ENST00000566087 AIMP1Q12904 312 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-211ENST00000566087 PDIA6Q15084 440 aa13.72□□□□□ -0.21
NSMCE1-211ENST00000566087 ANKRD13DQ6ZTN6 518 aa13.72□□□□□ -0.21
NSMCE1-211ENST00000566087 ZBTB3Q9H5J0 574 aa13.72□□□□□ -0.21
NSMCE1-211ENST00000566087 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
NSMCE1-211ENST00000566087 GJA3Q9Y6H8 435 aa13.72□□□□□ -0.21
NSMCE1-211ENST00000566087 ELL2O00472 640 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-211ENST00000566087 HSP90B1P14625 803 aaKnown RBP13.71□□□□□ -0.21
NSMCE1-211ENST00000566087 GRM1Q13255 1194 aa13.71□□□□□ -0.21
NSMCE1-211ENST00000566087 TTLL7Q6ZT98 887 aa13.71□□□□□ -0.21
NSMCE1-211ENST00000566087 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-211ENST00000566087 NUTM1Q86Y26 1132 aa13.71□□□□□ -0.21
NSMCE1-211ENST00000566087 XAGE3Q8WTP9 111 aa13.71□□□□□ -0.21
NSMCE1-211ENST00000566087 ABHD8Q96I13 439 aa13.71□□□□□ -0.21
NSMCE1-211ENST00000566087 CHPF2Q9P2E5 772 aa13.71□□□□□ -0.21
NSMCE1-211ENST00000566087 ABCC12Q96J65 1359 aa13.71□□□□□ -0.22
NSMCE1-211ENST00000566087 ALDH1B1P30837 517 aa13.7□□□□□ -0.22
NSMCE1-211ENST00000566087 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
NSMCE1-211ENST00000566087 GPC2Q8N158 579 aa13.7□□□□□ -0.22
NSMCE1-211ENST00000566087 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
NSMCE1-211ENST00000566087 SNED1Q8TER0 1413 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms