RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 PCMTD1Q96MG8 357 aaPredicted RBP12.29□□□□□ -0.44
USB1-212ENST00000566082 NOL10Q9BSC4 688 aaKnown RBP12.29□□□□□ -0.44
USB1-212ENST00000566082 DNAI1Q9UI46 699 aa12.29□□□□□ -0.44
USB1-212ENST00000566082 USP16Q9Y5T5 823 aa12.29□□□□□ -0.44
USB1-212ENST00000566082 MAP3K19Q56UN5 1328 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 CBFA2T2O43439 604 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 HSP90AA4PQ58FG1 418 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 RRP12Q5JTH9 1297 aaKnown RBP12.28□□□□□ -0.44
USB1-212ENST00000566082 FAM227BQ96M60 508 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 ZSCAN16Q9H4T2 348 aaPredicted RBP12.28□□□□□ -0.44
USB1-212ENST00000566082 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
USB1-212ENST00000566082 MYOM2P54296 1465 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 SLU7O95391 586 aaKnown RBP12.28□□□□□ -0.44
USB1-212ENST00000566082 ZNF853P0CG23 659 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 BMS1Q14692 1282 aaKnown RBP12.28□□□□□ -0.44
USB1-212ENST00000566082 LEKR1Q6ZMV7 388 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 AK7Q96M32 723 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 NLRP1Q9C000 1473 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 PLXNC1O60486 1568 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 TOP1P11387 765 aaKnown RBP12.28□□□□□ -0.44
USB1-212ENST00000566082 CALCOCO1Q9P1Z2 691 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 MTMR6Q9Y217 621 aa12.28□□□□□ -0.44
USB1-212ENST00000566082 KIF24Q5T7B8 1368 aa12.27□□□□□ -0.44
USB1-212ENST00000566082 ZNF75DP51815 510 aa12.27□□□□□ -0.44
USB1-212ENST00000566082 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.44
USB1-212ENST00000566082 USP44Q9H0E7 712 aa12.27□□□□□ -0.44
USB1-212ENST00000566082 ZSWIM4Q9H7M6 989 aa12.27□□□□□ -0.44
USB1-212ENST00000566082 GOLIM4O00461 696 aa12.27□□□□□ -0.45
USB1-212ENST00000566082 KIF20AO95235 890 aa12.27□□□□□ -0.45
USB1-212ENST00000566082 HAND2P61296 217 aa12.27□□□□□ -0.45
USB1-212ENST00000566082 ME3Q16798 604 aa12.27□□□□□ -0.45
USB1-212ENST00000566082 TTC6Q86TZ1 520 aa12.27□□□□□ -0.45
USB1-212ENST00000566082 SYTL4Q96C24 671 aaPredicted RBP12.27□□□□□ -0.45
USB1-212ENST00000566082 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
USB1-212ENST00000566082 HMG20BQ9P0W2 317 aa12.27□□□□□ -0.45
USB1-212ENST00000566082 TTC41PQ6P2S7 1318 aa12.27□□□□□ -0.45
USB1-212ENST00000566082 MADDQ8WXG6 1647 aa12.27□□□□□ -0.45
USB1-212ENST00000566082 LMOD1P29536 600 aaPredicted RBP12.27□□□□□ -0.45
USB1-212ENST00000566082 DHX8Q14562 1220 aaKnown RBP12.27□□□□□ -0.45
USB1-212ENST00000566082 ZNF397Q8NF99 534 aaPredicted RBP12.27□□□□□ -0.45
USB1-212ENST00000566082 OSBPL3Q9H4L5 887 aa12.27□□□□□ -0.45
USB1-212ENST00000566082 E9PCH4 1651 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 MYO5CQ9NQX4 1742 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 CYP2E1P05181 493 aaPredicted RBP12.26□□□□□ -0.45
USB1-212ENST00000566082 TTC39AQ5SRH9 613 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 CHST3Q7LGC8 479 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 RGS12O14924 1447 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 PTH1RQ03431 593 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 CCDC158Q5M9N0 1113 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 SYT10Q6XYQ8 523 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 PPFIBP1Q86W92 1011 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 LEO1Q8WVC0 666 aaPredicted RBP12.26□□□□□ -0.45
USB1-212ENST00000566082 ERCC4Q92889 916 aaPredicted RBP12.26□□□□□ -0.45
USB1-212ENST00000566082 ACBD3Q9H3P7 528 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 NRBP1Q9UHY1 535 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 AMOTL2Q9Y2J4 779 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 CLTCL1P53675 1640 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 ERICH2A1L162 156 aa12.26□□□□□ -0.45
USB1-212ENST00000566082 UBE3BQ7Z3V4 1068 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 GTF3C6Q969F1 213 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 TIGD1Q96MW7 591 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 PTCH1Q13635 1447 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 ATP5J2-PTCD1G3V325 749 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 UNC13BO14795 1591 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 PTCD1O75127 700 aaKnown RBP12.25□□□□□ -0.45
USB1-212ENST00000566082 ADCK5Q3MIX3 580 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 NOM1Q5C9Z4 860 aaKnown RBP12.25□□□□□ -0.45
USB1-212ENST00000566082 KIAA1524Q8TCG1 905 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 EDC4Q6P2E9 1401 aaKnown RBP12.25□□□□□ -0.45
USB1-212ENST00000566082 GOLGA8BA8MQT2 603 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 ZSCAN12O43309 604 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 JAK2O60674 1132 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 HMGB1P09429 215 aaKnown RBP12.25□□□□□ -0.45
USB1-212ENST00000566082 ELF2Q15723 593 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 NOC3LQ8WTT2 800 aaKnown RBP12.25□□□□□ -0.45
USB1-212ENST00000566082 ZFP91Q96JP5 570 aaPredicted RBP12.25□□□□□ -0.45
USB1-212ENST00000566082 SNRKQ9NRH2 765 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 CEP126Q9P2H0 1117 aa12.25□□□□□ -0.45
USB1-212ENST00000566082 GRM8O00222 908 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 SLC27A2O14975 620 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 IFIT1P09914 478 aaKnown RBP12.24□□□□□ -0.45
USB1-212ENST00000566082 GNG11P61952 73 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 FILIP1LQ4L180 1135 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 ARHGAP29Q52LW3 1261 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 CCDC70Q6NSX1 233 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 ZSCAN25Q6NSZ9 544 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 MRPS27Q92552 414 aaKnown RBP12.24□□□□□ -0.45
USB1-212ENST00000566082 CCDC102AQ96A19 550 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 IFNKQ9P0W0 207 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 ORC3Q9UBD5 711 aaPredicted RBP12.24□□□□□ -0.45
USB1-212ENST00000566082 ERCC6L2Q5T890 1561 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 IMMTQ16891 758 aaKnown RBP12.24□□□□□ -0.45
USB1-212ENST00000566082 KLHL10Q6JEL2 608 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 CCDC82Q8N4S0 544 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 KLHDC4Q8TBB5 520 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 CPLX3Q8WVH0 158 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 CLSTN2Q9H4D0 955 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 CTNNA3Q9UI47 895 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 KIAA0232Q92628 1395 aa12.24□□□□□ -0.45
USB1-212ENST00000566082 A0A087WZG4 1122 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms