RNA–Protein interactions for RNA: ENST00000565309.1

TRAPPC2L-210, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 699 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-210ENST00000565309 MRPL50Q8N5N7 158 aaKnown RBP16.73■□□□□ 0.27
TRAPPC2L-210ENST00000565309 KIAA1551Q9HCM1 1747 aa16.73■□□□□ 0.27
TRAPPC2L-210ENST00000565309 ANKRD31Q8N7Z5 1873 aa16.72■□□□□ 0.27
TRAPPC2L-210ENST00000565309 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
TRAPPC2L-210ENST00000565309 C2CD5Q86YS7 1000 aa16.72■□□□□ 0.27
TRAPPC2L-210ENST00000565309 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
TRAPPC2L-210ENST00000565309 TRMT112Q9UI30 125 aaKnown RBP16.72■□□□□ 0.27
TRAPPC2L-210ENST00000565309 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
TRAPPC2L-210ENST00000565309 H0YIN7 160 aa16.71■□□□□ 0.27
TRAPPC2L-210ENST00000565309 NEXNQ0ZGT2 675 aa16.71■□□□□ 0.27
TRAPPC2L-210ENST00000565309 GPR162Q16538 588 aa16.71■□□□□ 0.27
TRAPPC2L-210ENST00000565309 DNAAF4Q8WXU2 420 aa16.71■□□□□ 0.27
TRAPPC2L-210ENST00000565309 ABCC12Q96J65 1359 aa16.71■□□□□ 0.27
TRAPPC2L-210ENST00000565309 F6X3S4 739 aa16.7■□□□□ 0.26
TRAPPC2L-210ENST00000565309 IGKV5-2P06315 115 aa16.7■□□□□ 0.26
TRAPPC2L-210ENST00000565309 RARSP54136 660 aaKnown RBP16.7■□□□□ 0.26
TRAPPC2L-210ENST00000565309 SYNE4Q8N205 404 aa16.7■□□□□ 0.26
TRAPPC2L-210ENST00000565309 CCDC191Q8NCU4 936 aa16.7■□□□□ 0.26
TRAPPC2L-210ENST00000565309 PIM2Q9P1W9 311 aa16.7■□□□□ 0.26
TRAPPC2L-210ENST00000565309 RNF123Q5XPI4 1314 aa16.7■□□□□ 0.26
TRAPPC2L-210ENST00000565309 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.267e-6■■□□□ 13.6
TRAPPC2L-210ENST00000565309 FAM89AQ96GI7 184 aa16.69■□□□□ 0.26
TRAPPC2L-210ENST00000565309 YTHDC1Q96MU7 727 aaKnown RBP16.69■□□□□ 0.26
TRAPPC2L-210ENST00000565309 CWC25Q9NXE8 425 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC2L-210ENST00000565309 PDZRN3Q9UPQ7 1066 aa16.69■□□□□ 0.26
TRAPPC2L-210ENST00000565309 SH3TC1Q8TE82 1336 aa16.69■□□□□ 0.26
TRAPPC2L-210ENST00000565309 KLRG2A4D1S0 409 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC2L-210ENST00000565309 SRGNP10124 158 aa16.68■□□□□ 0.26
TRAPPC2L-210ENST00000565309 CWF19L2Q2TBE0 894 aaKnown RBP16.68■□□□□ 0.26
TRAPPC2L-210ENST00000565309 RTL5Q5HYW3 569 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC2L-210ENST00000565309 ZNF622Q969S3 477 aaKnown RBP eCLIP16.68■□□□□ 0.265e-7■□□□□ 9.2
TRAPPC2L-210ENST00000565309 BCS1LQ9Y276 419 aa16.68■□□□□ 0.26
TRAPPC2L-210ENST00000565309 PTPRCP08575 1304 aa16.68■□□□□ 0.26
TRAPPC2L-210ENST00000565309 NEURL1BA8MQ27 555 aa16.67■□□□□ 0.26
TRAPPC2L-210ENST00000565309 HCLS1P14317 486 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC2L-210ENST00000565309 SLC10A5Q5PT55 438 aa16.67■□□□□ 0.26
TRAPPC2L-210ENST00000565309 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC2L-210ENST00000565309 TNRC6CQ9HCJ0 1690 aaKnown RBP16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 RIC1Q4ADV7 1423 aa16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 DALRD3Q5D0E6 543 aaKnown RBP16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 SLC4A10Q6U841 1118 aa16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 TTLL6Q8N841 843 aa16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 ZBTB38Q8NAP3 1195 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 LINS1Q8NG48 757 aa16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 JARID2Q92833 1246 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 MASTLQ96GX5 879 aa16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
TRAPPC2L-210ENST00000565309 DLEC1Q9Y238 1755 aa16.65■□□□□ 0.26
TRAPPC2L-210ENST00000565309 PCCAP05165 728 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC2L-210ENST00000565309 NPR1P16066 1061 aa16.65■□□□□ 0.26
TRAPPC2L-210ENST00000565309 BEND3Q5T5X7 828 aa16.65■□□□□ 0.26
TRAPPC2L-210ENST00000565309 STYK1Q6J9G0 422 aa16.65■□□□□ 0.26
TRAPPC2L-210ENST00000565309 C3orf67Q6ZVT6 689 aa16.65■□□□□ 0.26
TRAPPC2L-210ENST00000565309 NOB1Q9ULX3 412 aaKnown RBP16.65■□□□□ 0.26
TRAPPC2L-210ENST00000565309 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC2L-210ENST00000565309 BCAR3O75815 825 aa16.64■□□□□ 0.25
TRAPPC2L-210ENST00000565309 GCKRQ14397 625 aa16.64■□□□□ 0.25
TRAPPC2L-210ENST00000565309 CRY2Q49AN0 593 aa16.64■□□□□ 0.25
TRAPPC2L-210ENST00000565309 GRIN3BO60391 1043 aa16.63■□□□□ 0.25
TRAPPC2L-210ENST00000565309 RPGRQ92834 1020 aaKnown RBP16.63■□□□□ 0.25
TRAPPC2L-210ENST00000565309 CNKSR1Q969H4 720 aa16.63■□□□□ 0.25
TRAPPC2L-210ENST00000565309 H7C1W4 665 aa16.62■□□□□ 0.25
TRAPPC2L-210ENST00000565309 UBE3BQ7Z3V4 1068 aa16.62■□□□□ 0.25
TRAPPC2L-210ENST00000565309 SRCIN1Q9C0H9 1055 aa16.62■□□□□ 0.25
TRAPPC2L-210ENST00000565309 KIF16BQ96L93 1317 aa16.62■□□□□ 0.25
TRAPPC2L-210ENST00000565309 DDX60Q8IY21 1712 aaKnown RBP16.62■□□□□ 0.25
TRAPPC2L-210ENST00000565309 HSP90B1P14625 803 aaKnown RBP16.61■□□□□ 0.25
TRAPPC2L-210ENST00000565309 ALDH1B1P30837 517 aa16.61■□□□□ 0.25
TRAPPC2L-210ENST00000565309 PRPF40BQ6NWY9 871 aaKnown RBP16.61■□□□□ 0.25
TRAPPC2L-210ENST00000565309 FRAT1Q92837 279 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC2L-210ENST00000565309 ALDH1L1O75891 902 aa16.6■□□□□ 0.25
TRAPPC2L-210ENST00000565309 HOXA10P31260 410 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC2L-210ENST00000565309 RBM17Q96I25 401 aaKnown RBP16.6■□□□□ 0.25
TRAPPC2L-210ENST00000565309 API5Q9BZZ5 524 aaKnown RBP16.6■□□□□ 0.25
TRAPPC2L-210ENST00000565309 ZNF219Q9P2Y4 722 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC2L-210ENST00000565309 CDHR2Q9BYE9 1310 aa16.6■□□□□ 0.25
TRAPPC2L-210ENST00000565309 LAMB2P55268 1798 aa16.59■□□□□ 0.25
TRAPPC2L-210ENST00000565309 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
TRAPPC2L-210ENST00000565309 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
TRAPPC2L-210ENST00000565309 C21orf2O43822 256 aa16.59■□□□□ 0.25
TRAPPC2L-210ENST00000565309 PDE8AO60658 829 aa16.59■□□□□ 0.25
TRAPPC2L-210ENST00000565309 ARHGAP27Q6ZUM4 889 aa16.59■□□□□ 0.25
TRAPPC2L-210ENST00000565309 ARHGAP45Q92619 1136 aa16.59■□□□□ 0.25
TRAPPC2L-210ENST00000565309 CRAMP1Q96RY5 1269 aa16.59■□□□□ 0.25
TRAPPC2L-210ENST00000565309 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
TRAPPC2L-210ENST00000565309 CACNA1SQ13698 1873 aa16.59■□□□□ 0.25
TRAPPC2L-210ENST00000565309 GRM8O00222 908 aa16.58■□□□□ 0.24
TRAPPC2L-210ENST00000565309 CASP7P55210 303 aa16.58■□□□□ 0.24
TRAPPC2L-210ENST00000565309 SF3B3Q15393 1217 aaKnown RBP16.58■□□□□ 0.24
TRAPPC2L-210ENST00000565309 DDX46Q7L014 1031 aaKnown RBP16.58■□□□□ 0.24
TRAPPC2L-210ENST00000565309 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC2L-210ENST00000565309 ATF7IPQ6VMQ6 1270 aa16.57■□□□□ 0.24
TRAPPC2L-210ENST00000565309 ABCC4O15439 1325 aa16.56■□□□□ 0.24
TRAPPC2L-210ENST00000565309 TRIM27P14373 513 aa16.56■□□□□ 0.24
TRAPPC2L-210ENST00000565309 CTSWP56202 376 aa16.56■□□□□ 0.24
TRAPPC2L-210ENST00000565309 C7orf43Q8WVR3 580 aa16.56■□□□□ 0.24
TRAPPC2L-210ENST00000565309 CCDC85AQ96PX6 553 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC2L-210ENST00000565309 RCAN3Q9UKA8 241 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms