RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 COL4A1P02462 1669 aa19.21■□□□□ 0.67
USB1-210ENST00000565151 GTF2E1P29083 439 aaPredicted RBP19.21■□□□□ 0.67
USB1-210ENST00000565151 HOXA10P31260 410 aaPredicted RBP19.21■□□□□ 0.67
USB1-210ENST00000565151 ZEB1P37275 1124 aaPredicted RBP19.21■□□□□ 0.67
USB1-210ENST00000565151 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
USB1-210ENST00000565151 RBM46Q8TBY0 533 aaKnown RBP19.21■□□□□ 0.67
USB1-210ENST00000565151 ZNF428Q96B54 188 aa19.21■□□□□ 0.67
USB1-210ENST00000565151 DUSP27Q5VZP5 1158 aa19.2■□□□□ 0.66
USB1-210ENST00000565151 NLRP10Q86W26 655 aa19.2■□□□□ 0.66
USB1-210ENST00000565151 PCNTO95613 3336 aa19.2■□□□□ 0.66
USB1-210ENST00000565151 ZNF316A6NFI3 1004 aaPredicted RBP19.19■□□□□ 0.66
USB1-210ENST00000565151 CCDC93Q567U6 631 aa19.19■□□□□ 0.66
USB1-210ENST00000565151 SLC10A5Q5PT55 438 aa19.19■□□□□ 0.66
USB1-210ENST00000565151 HDGFL1Q5TGJ6 251 aa19.19■□□□□ 0.66
USB1-210ENST00000565151 ZNF277Q9NRM2 450 aaPredicted RBP19.19■□□□□ 0.66
USB1-210ENST00000565151 HTRA3P83110 453 aa19.18■□□□□ 0.66
USB1-210ENST00000565151 FKBP4Q02790 459 aaKnown RBP eCLIP19.18■□□□□ 0.66
USB1-210ENST00000565151 TCIRG1Q13488 830 aa19.18■□□□□ 0.66
USB1-210ENST00000565151 PARP10Q53GL7 1025 aa19.18■□□□□ 0.66
USB1-210ENST00000565151 C8orf58Q8NAV2 365 aa19.18■□□□□ 0.66
USB1-210ENST00000565151 SCN4AP35499 1836 aa19.18■□□□□ 0.66
USB1-210ENST00000565151 DDNO94850 711 aaPredicted RBP19.17■□□□□ 0.66
USB1-210ENST00000565151 HOXB7P09629 217 aa19.17■□□□□ 0.66
USB1-210ENST00000565151 SOGA3Q5TF21 947 aa19.17■□□□□ 0.66
USB1-210ENST00000565151 DNAJC5GQ8N7S2 189 aa19.17■□□□□ 0.66
USB1-210ENST00000565151 UTP14AQ9BVJ6 771 aaKnown RBP19.17■□□□□ 0.66
USB1-210ENST00000565151 IFT57Q9NWB7 429 aa19.17■□□□□ 0.66
USB1-210ENST00000565151 ELL2O00472 640 aaPredicted RBP19.16■□□□□ 0.66
USB1-210ENST00000565151 VEGFAP15692 232 aaPredicted RBP19.16■□□□□ 0.66
USB1-210ENST00000565151 ALDH1B1P30837 517 aa19.16■□□□□ 0.66
USB1-210ENST00000565151 PPP1R42Q7Z4L9 355 aa19.16■□□□□ 0.66
USB1-210ENST00000565151 ZNF541Q9H0D2 1346 aa19.16■□□□□ 0.66
USB1-210ENST00000565151 HCLS1P14317 486 aaPredicted RBP19.15■□□□□ 0.66
USB1-210ENST00000565151 TSPYL6Q8N831 410 aa19.15■□□□□ 0.66
USB1-210ENST00000565151 CRAMP1Q96RY5 1269 aa19.15■□□□□ 0.66
USB1-210ENST00000565151 ISCA1Q9BUE6 129 aa19.15■□□□□ 0.66
USB1-210ENST00000565151 LTBP1Q14766 1721 aa19.14■□□□□ 0.66
USB1-210ENST00000565151 TCERG1O14776 1098 aaKnown RBP19.14■□□□□ 0.65
USB1-210ENST00000565151 C16orf71Q8IYS4 520 aaPredicted RBP19.14■□□□□ 0.65
USB1-210ENST00000565151 PLBD2Q8NHP8 589 aa19.14■□□□□ 0.65
USB1-210ENST00000565151 RPGRQ92834 1020 aaKnown RBP19.14■□□□□ 0.65
USB1-210ENST00000565151 PHAXQ9H814 394 aaKnown RBP19.14■□□□□ 0.65
USB1-210ENST00000565151 DBF4Q9UBU7 674 aaPredicted RBP19.14■□□□□ 0.65
USB1-210ENST00000565151 LRRC37AA6NMS7 1700 aa19.14■□□□□ 0.65
USB1-210ENST00000565151 ATP5J2-PTCD1G3V325 749 aa19.13■□□□□ 0.65
USB1-210ENST00000565151 POTEIP0CG38 1075 aa19.13■□□□□ 0.65
USB1-210ENST00000565151 POTEJP0CG39 1038 aa19.13■□□□□ 0.65
USB1-210ENST00000565151 GNAI1P63096 354 aa19.13■□□□□ 0.65
USB1-210ENST00000565151 FSTL1Q12841 308 aa19.13■□□□□ 0.65
USB1-210ENST00000565151 ANKRD13DQ6ZTN6 518 aa19.13■□□□□ 0.65
USB1-210ENST00000565151 RTKN2Q8IZC4 609 aa19.13■□□□□ 0.65
USB1-210ENST00000565151 ADAMTSL1Q8N6G6 1762 aa19.13■□□□□ 0.65
USB1-210ENST00000565151 ABCC4O15439 1325 aa19.12■□□□□ 0.65
USB1-210ENST00000565151 APLP1P51693 650 aa19.12■□□□□ 0.65
USB1-210ENST00000565151 HSP90AB3PQ58FF7 597 aa19.12■□□□□ 0.65
USB1-210ENST00000565151 PIAS4Q8N2W9 510 aaPredicted RBP19.12■□□□□ 0.65
USB1-210ENST00000565151 TSR2Q969E8 191 aaKnown RBP19.12■□□□□ 0.65
USB1-210ENST00000565151 NLRP3Q96P20 1036 aa19.12■□□□□ 0.65
USB1-210ENST00000565151 IARSP41252 1262 aaKnown RBP19.11■□□□□ 0.65
USB1-210ENST00000565151 DPY19L2Q6NUT2 758 aa19.11■□□□□ 0.65
USB1-210ENST00000565151 WWC1Q8IX03 1113 aa19.11■□□□□ 0.65
USB1-210ENST00000565151 RBM17Q96I25 401 aaKnown RBP19.11■□□□□ 0.65
USB1-210ENST00000565151 PSMD1Q99460 953 aa19.11■□□□□ 0.65
USB1-210ENST00000565151 HYPKQ9NX55 129 aa19.11■□□□□ 0.65
USB1-210ENST00000565151 DUOX1Q9NRD9 1551 aa19.1■□□□□ 0.65
USB1-210ENST00000565151 SH3TC1Q8TE82 1336 aa19.1■□□□□ 0.65
USB1-210ENST00000565151 FZD9O00144 591 aa19.1■□□□□ 0.65
USB1-210ENST00000565151 PPEF1O14829 653 aaPredicted RBP19.1■□□□□ 0.65
USB1-210ENST00000565151 TRMT112Q9UI30 125 aaKnown RBP19.1■□□□□ 0.65
USB1-210ENST00000565151 CACNA1FO60840 1977 aa19.1■□□□□ 0.65
USB1-210ENST00000565151 RNF123Q5XPI4 1314 aa19.09■□□□□ 0.65
USB1-210ENST00000565151 CCDC27Q2M243 656 aa19.09■□□□□ 0.65
USB1-210ENST00000565151 SMC1BQ8NDV3 1235 aa19.09■□□□□ 0.65
USB1-210ENST00000565151 FAM89AQ96GI7 184 aa19.09■□□□□ 0.65
USB1-210ENST00000565151 MRS2Q9HD23 443 aa19.09■□□□□ 0.65
USB1-210ENST00000565151 L3MBTL3Q96JM7 780 aaPredicted RBP19.08■□□□□ 0.64
USB1-210ENST00000565151 ATP6V0A2Q9Y487 856 aa19.08■□□□□ 0.64
USB1-210ENST00000565151 CALD1Q05682 793 aaKnown RBP19.07■□□□□ 0.64
USB1-210ENST00000565151 TRIM28Q13263 835 aaKnown RBP19.07■□□□□ 0.64
USB1-210ENST00000565151 RTL5Q5HYW3 569 aaPredicted RBP19.07■□□□□ 0.64
USB1-210ENST00000565151 CC2D2BQ6DHV5 1058 aa19.07■□□□□ 0.64
USB1-210ENST00000565151 MYH3P11055 1940 aa19.06■□□□□ 0.64
USB1-210ENST00000565151 TAF1DQ9H5J8 278 aaPredicted RBP19.06■□□□□ 0.64
USB1-210ENST00000565151 ANP32CO43423 234 aa19.05■□□□□ 0.64
USB1-210ENST00000565151 SPEF2Q9C093 1822 aa19.04■□□□□ 0.64
USB1-210ENST00000565151 G2E3Q7L622 706 aa19.04■□□□□ 0.64
USB1-210ENST00000565151 JARID2Q92833 1246 aaPredicted RBP19.04■□□□□ 0.64
USB1-210ENST00000565151 SPINK5Q9NQ38 1064 aaPredicted RBP19.04■□□□□ 0.64
USB1-210ENST00000565151 SALL2Q9Y467 1007 aaPredicted RBP19.04■□□□□ 0.64
USB1-210ENST00000565151 GRAPQ13588 217 aa19.03■□□□□ 0.64
USB1-210ENST00000565151 SF3B3Q15393 1217 aaKnown RBP19.03■□□□□ 0.64
USB1-210ENST00000565151 RIC3Q7Z5B4 369 aa19.03■□□□□ 0.64
USB1-210ENST00000565151 SP8Q8IXZ3 490 aa19.03■□□□□ 0.64
USB1-210ENST00000565151 GRAPLQ8TC17 118 aaPredicted RBP19.03■□□□□ 0.64
USB1-210ENST00000565151 CELF1Q92879 486 aaKnown RBP19.03■□□□□ 0.64
USB1-210ENST00000565151 MYD88Q99836 296 aa19.03■□□□□ 0.64
USB1-210ENST00000565151 RTFDC1Q9BY42 306 aaPredicted RBP19.03■□□□□ 0.64
USB1-210ENST00000565151 BBOX1O75936 387 aa19.02■□□□□ 0.64
USB1-210ENST00000565151 AOC3Q16853 763 aa19.02■□□□□ 0.64
USB1-210ENST00000565151 IL16Q14005 1332 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms