RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 ATP5J2-PTCD1G3V325 749 aa23.86■■□□□ 1.41
PKD1-229ENST00000564890 G2E3Q7L622 706 aa23.86■■□□□ 1.41
PKD1-229ENST00000564890 ISCA1Q9BUE6 129 aa23.86■■□□□ 1.41
PKD1-229ENST00000564890 ARFGEF1Q9Y6D6 1849 aa23.86■■□□□ 1.41
PKD1-229ENST00000564890 KLRG2A4D1S0 409 aaPredicted RBP23.85■■□□□ 1.41
PKD1-229ENST00000564890 STYK1Q6J9G0 422 aa23.85■■□□□ 1.41
PKD1-229ENST00000564890 ZNF428Q96B54 188 aa23.85■■□□□ 1.41
PKD1-229ENST00000564890 MASTLQ96GX5 879 aa23.85■■□□□ 1.41
PKD1-229ENST00000564890 TNRC6CQ9HCJ0 1690 aaKnown RBP23.84■■□□□ 1.41
PKD1-229ENST00000564890 ARHGAP27Q6ZUM4 889 aa23.84■■□□□ 1.41
PKD1-229ENST00000564890 MYD88Q99836 296 aa23.84■■□□□ 1.41
PKD1-229ENST00000564890 TRMT112Q9UI30 125 aaKnown RBP23.84■■□□□ 1.41
PKD1-229ENST00000564890 MAP3K2Q9Y2U5 619 aa23.84■■□□□ 1.41
PKD1-229ENST00000564890 RIC1Q4ADV7 1423 aa23.84■■□□□ 1.41
PKD1-229ENST00000564890 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
PKD1-229ENST00000564890 NPR1P16066 1061 aa23.83■■□□□ 1.41
PKD1-229ENST00000564890 FLIIQ13045 1269 aa23.83■■□□□ 1.41
PKD1-229ENST00000564890 KSR2Q6VAB6 950 aa23.83■■□□□ 1.41
PKD1-229ENST00000564890 CNKSR1Q969H4 720 aa23.83■■□□□ 1.41
PKD1-229ENST00000564890 PI4KAP2A4QPH2 592 aa23.82■■□□□ 1.4
PKD1-229ENST00000564890 TRIM28Q13263 835 aaKnown RBP23.82■■□□□ 1.4
PKD1-229ENST00000564890 PI4KAP1Q8N8J0 262 aa23.82■■□□□ 1.4
PKD1-229ENST00000564890 METTL22Q9BUU2 404 aaPredicted RBP23.82■■□□□ 1.4
PKD1-229ENST00000564890 SH3TC1Q8TE82 1336 aa23.82■■□□□ 1.4
PKD1-229ENST00000564890 ADCY9O60503 1353 aa23.81■■□□□ 1.4
PKD1-229ENST00000564890 HNRNPUQ00839 825 aaKnown RBP eCLIP23.81■■□□□ 1.4
PKD1-229ENST00000564890 TRMT2AQ8IZ69 625 aaKnown RBP23.81■■□□□ 1.4
PKD1-229ENST00000564890 SYNE4Q8N205 404 aa23.81■■□□□ 1.4
PKD1-229ENST00000564890 CACNA1FO60840 1977 aa23.81■■□□□ 1.4
PKD1-229ENST00000564890 FKBP5Q13451 457 aaPredicted RBP23.8■■□□□ 1.4
PKD1-229ENST00000564890 CRY2Q49AN0 593 aa23.8■■□□□ 1.4
PKD1-229ENST00000564890 SLC10A5Q5PT55 438 aa23.8■■□□□ 1.4
PKD1-229ENST00000564890 HCLS1P14317 486 aaPredicted RBP23.79■■□□□ 1.4
PKD1-229ENST00000564890 PRPF40BQ6NWY9 871 aaKnown RBP23.79■■□□□ 1.4
PKD1-229ENST00000564890 C3orf67Q6ZVT6 689 aa23.79■■□□□ 1.4
PKD1-229ENST00000564890 ZNF219Q9P2Y4 722 aaPredicted RBP23.79■■□□□ 1.4
PKD1-229ENST00000564890 RPGRQ92834 1020 aaKnown RBP23.78■■□□□ 1.4
PKD1-229ENST00000564890 FAM89AQ96GI7 184 aa23.78■■□□□ 1.4
PKD1-229ENST00000564890 NLRP3Q96P20 1036 aa23.78■■□□□ 1.4
PKD1-229ENST00000564890 SLX4Q8IY92 1834 aa23.77■■□□□ 1.4
PKD1-229ENST00000564890 C21orf2O43822 256 aa23.77■■□□□ 1.4
PKD1-229ENST00000564890 CCDC191Q8NCU4 936 aa23.77■■□□□ 1.4
PKD1-229ENST00000564890 CACNA1SQ13698 1873 aa23.77■■□□□ 1.4
PKD1-229ENST00000564890 NEXNQ0ZGT2 675 aa23.76■■□□□ 1.39
PKD1-229ENST00000564890 RTL5Q5HYW3 569 aaPredicted RBP23.76■■□□□ 1.39
PKD1-229ENST00000564890 CWC25Q9NXE8 425 aaPredicted RBP23.76■■□□□ 1.39
PKD1-229ENST00000564890 IGKV5-2P06315 115 aa23.75■■□□□ 1.39
PKD1-229ENST00000564890 ALDH1B1P30837 517 aa23.75■■□□□ 1.39
PKD1-229ENST00000564890 DNAAF4Q8WXU2 420 aa23.75■■□□□ 1.39
PKD1-229ENST00000564890 HOXA10P31260 410 aaPredicted RBP23.74■■□□□ 1.39
PKD1-229ENST00000564890 ZBTB38Q8NAP3 1195 aaPredicted RBP23.74■■□□□ 1.39
PKD1-229ENST00000564890 RBM17Q96I25 401 aaKnown RBP23.74■■□□□ 1.39
PKD1-229ENST00000564890 RASSF7Q02833 373 aa23.73■■□□□ 1.39
PKD1-229ENST00000564890 IRS4O14654 1257 aaPredicted RBP23.72■■□□□ 1.39
PKD1-229ENST00000564890 PCCAP05165 728 aaPredicted RBP23.72■■□□□ 1.39
PKD1-229ENST00000564890 CWF19L2Q2TBE0 894 aaKnown RBP23.72■■□□□ 1.39
PKD1-229ENST00000564890 MRPL50Q8N5N7 158 aaKnown RBP23.72■■□□□ 1.39
PKD1-229ENST00000564890 C7orf43Q8WVR3 580 aa23.72■■□□□ 1.39
PKD1-229ENST00000564890 CRAMP1Q96RY5 1269 aa23.72■■□□□ 1.39
PKD1-229ENST00000564890 LAMB2P55268 1798 aa23.71■■□□□ 1.39
PKD1-229ENST00000564890 DDX60Q8IY21 1712 aaKnown RBP23.71■■□□□ 1.39
PKD1-229ENST00000564890 NEURL1BA8MQ27 555 aa23.71■■□□□ 1.39
PKD1-229ENST00000564890 F6X3S4 739 aa23.71■■□□□ 1.39
PKD1-229ENST00000564890 SOGA3Q5TF21 947 aa23.71■■□□□ 1.39
PKD1-229ENST00000564890 SSH1Q8WYL5 1049 aa23.71■■□□□ 1.39
PKD1-229ENST00000564890 JARID2Q92833 1246 aaPredicted RBP23.71■■□□□ 1.39
PKD1-229ENST00000564890 NFKBIEO00221 500 aa23.7■■□□□ 1.38
PKD1-229ENST00000564890 CT47B1P0C2W7 299 aaPredicted RBP23.7■■□□□ 1.38
PKD1-229ENST00000564890 C9orf131Q5VYM1 1079 aa23.7■■□□□ 1.38
PKD1-229ENST00000564890 BCL2L13Q9BXK5 485 aa23.7■■□□□ 1.38
PKD1-229ENST00000564890 LINS1Q8NG48 757 aa23.69■■□□□ 1.38
PKD1-229ENST00000564890 ABCC4O15439 1325 aa23.68■■□□□ 1.38
PKD1-229ENST00000564890 HSP90B1P14625 803 aaKnown RBP23.68■■□□□ 1.38
PKD1-229ENST00000564890 ALDH1L2Q3SY69 923 aa23.68■■□□□ 1.38
PKD1-229ENST00000564890 CCDC93Q567U6 631 aa23.68■■□□□ 1.38
PKD1-229ENST00000564890 OLFM4Q6UX06 510 aa23.68■■□□□ 1.38
PKD1-229ENST00000564890 DDX46Q7L014 1031 aaKnown RBP23.68■■□□□ 1.38
PKD1-229ENST00000564890 ZNF784Q8NCA9 323 aaPredicted RBP23.68■■□□□ 1.38
PKD1-229ENST00000564890 RNF181Q9P0P0 153 aa23.68■■□□□ 1.38
PKD1-229ENST00000564890 ZBED9Q6R2W3 1325 aa23.67■■□□□ 1.38
PKD1-229ENST00000564890 PPEF1O14829 653 aaPredicted RBP23.67■■□□□ 1.38
PKD1-229ENST00000564890 SMC4Q9NTJ3 1288 aa23.67■■□□□ 1.38
PKD1-229ENST00000564890 FER1L6Q2WGJ9 1857 aa23.66■■□□□ 1.38
PKD1-229ENST00000564890 GCKRQ14397 625 aa23.66■■□□□ 1.38
PKD1-229ENST00000564890 SF3B3Q15393 1217 aaKnown RBP23.66■■□□□ 1.38
PKD1-229ENST00000564890 TAOK3Q9H2K8 898 aa23.66■■□□□ 1.38
PKD1-229ENST00000564890 CDHR2Q9BYE9 1310 aa23.65■■□□□ 1.38
PKD1-229ENST00000564890 SBF1O95248 1867 aa23.65■■□□□ 1.38
PKD1-229ENST00000564890 PDE8AO60658 829 aa23.65■■□□□ 1.38
PKD1-229ENST00000564890 LMNB1P20700 586 aa23.65■■□□□ 1.38
PKD1-229ENST00000564890 PRELPP51888 382 aa23.65■■□□□ 1.38
PKD1-229ENST00000564890 BEND3Q5T5X7 828 aa23.65■■□□□ 1.38
PKD1-229ENST00000564890 PTPRCP08575 1304 aa23.64■■□□□ 1.38
PKD1-229ENST00000564890 LTBP3Q9NS15 1303 aa23.64■■□□□ 1.38
PKD1-229ENST00000564890 GRAPQ13588 217 aa23.64■■□□□ 1.37
PKD1-229ENST00000564890 SLC4A10Q6U841 1118 aa23.64■■□□□ 1.37
PKD1-229ENST00000564890 UBE3BQ7Z3V4 1068 aa23.64■■□□□ 1.37
PKD1-229ENST00000564890 RTKN2Q8IZC4 609 aa23.64■■□□□ 1.37
PKD1-229ENST00000564890 GRAPLQ8TC17 118 aaPredicted RBP23.64■■□□□ 1.37
PKD1-229ENST00000564890 H7C1W4 665 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms