RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 COL8A1P27658 744 aa9.18□□□□□ -0.94
CHD9-212ENST00000564641 SLC30A3Q99726 388 aa9.18□□□□□ -0.94
CHD9-212ENST00000564641 SPOCK3Q9BQ16 436 aa9.18□□□□□ -0.94
CHD9-212ENST00000564641 KRBA1A5PL33 1030 aa9.17□□□□□ -0.94
CHD9-212ENST00000564641 TGFBR3LH3BV60 316 aa9.17□□□□□ -0.94
CHD9-212ENST00000564641 EPB42P16452 691 aa9.17□□□□□ -0.94
CHD9-212ENST00000564641 WEE1P30291 646 aa9.17□□□□□ -0.94
CHD9-212ENST00000564641 VTI1AQ96AJ9 217 aa9.17□□□□□ -0.94
CHD9-212ENST00000564641 SUV39H2Q9H5I1 410 aa9.16□□□□□ -0.94
CHD9-212ENST00000564641 PRDM6Q9NQX0 595 aa9.16□□□□□ -0.94
CHD9-212ENST00000564641 SUZ12Q15022 739 aaKnown RBP9.15□□□□□ -0.94
CHD9-212ENST00000564641 C11orf16Q9NQ32 467 aa9.15□□□□□ -0.94
CHD9-212ENST00000564641 PROCP04070 461 aa9.14□□□□□ -0.95
CHD9-212ENST00000564641 ITGB2P05107 769 aa9.14□□□□□ -0.95
CHD9-212ENST00000564641 ADH7P40394 386 aa9.14□□□□□ -0.95
CHD9-212ENST00000564641 ELOAQ14241 798 aaKnown RBP9.14□□□□□ -0.95
CHD9-212ENST00000564641 SWI5Q1ZZU3 235 aa9.14□□□□□ -0.95
CHD9-212ENST00000564641 NOVA2Q9UNW9 492 aaKnown RBP9.14□□□□□ -0.95
CHD9-212ENST00000564641 PLVAPQ9BX97 442 aa9.13□□□□□ -0.95
CHD9-212ENST00000564641 ACIN1Q9UKV3 1341 aaKnown RBP9.12□□□□□ -0.95
CHD9-212ENST00000564641 SPATA31C1P0DKV0 1188 aa9.12□□□□□ -0.95
CHD9-212ENST00000564641 BHMTQ93088 406 aa9.12□□□□□ -0.95
CHD9-212ENST00000564641 MYO19Q96H55 970 aa9.12□□□□□ -0.95
CHD9-212ENST00000564641 PNMA5Q96PV4 448 aa9.12□□□□□ -0.95
CHD9-212ENST00000564641 DMGDHQ9UI17 866 aaKnown RBP9.12□□□□□ -0.95
CHD9-212ENST00000564641 M0R082 166 aa9.11□□□□□ -0.95
CHD9-212ENST00000564641 CCINQ13939 588 aa9.11□□□□□ -0.95
CHD9-212ENST00000564641 PCSK7Q16549 785 aa9.11□□□□□ -0.95
CHD9-212ENST00000564641 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
CHD9-212ENST00000564641 ZNF417Q8TAU3 575 aa9.11□□□□□ -0.95
CHD9-212ENST00000564641 TRIM11Q96F44 468 aa9.11□□□□□ -0.95
CHD9-212ENST00000564641 ZNF587Q96SQ5 575 aaPredicted RBP9.11□□□□□ -0.95
CHD9-212ENST00000564641 ZMYND15Q9H091 742 aa9.11□□□□□ -0.95
CHD9-212ENST00000564641 C11orf91Q3C1V1 193 aa9.1□□□□□ -0.95
CHD9-212ENST00000564641 PRRT3Q5FWE3 981 aa9.1□□□□□ -0.95
CHD9-212ENST00000564641 GSX2Q9BZM3 304 aa9.1□□□□□ -0.95
CHD9-212ENST00000564641 QTRT2Q9H974 415 aaKnown RBP9.1□□□□□ -0.95
CHD9-212ENST00000564641 BCS1LQ9Y276 419 aa9.1□□□□□ -0.95
CHD9-212ENST00000564641 LGR5O75473 907 aa9.09□□□□□ -0.95
CHD9-212ENST00000564641 INPP5BP32019 993 aa9.09□□□□□ -0.95
CHD9-212ENST00000564641 DGKZQ13574 1117 aa9.09□□□□□ -0.95
CHD9-212ENST00000564641 MICALL1Q8N3F8 863 aa9.09□□□□□ -0.95
CHD9-212ENST00000564641 UBE2OQ9C0C9 1292 aaKnown RBP9.09□□□□□ -0.95
CHD9-212ENST00000564641 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.09□□□□□ -0.95
CHD9-212ENST00000564641 C1QTNF9BB2RNN3 333 aa9.08□□□□□ -0.96
CHD9-212ENST00000564641 IDH3AP50213 366 aa9.08□□□□□ -0.96
CHD9-212ENST00000564641 ARSDP51689 593 aa9.08□□□□□ -0.96
CHD9-212ENST00000564641 CDCA8Q53HL2 280 aa9.08□□□□□ -0.96
CHD9-212ENST00000564641 KLK14Q9P0G3 267 aa9.08□□□□□ -0.96
CHD9-212ENST00000564641 STARD13Q9Y3M8 1113 aa9.08□□□□□ -0.96
CHD9-212ENST00000564641 LILRB5O75023 590 aa9.07□□□□□ -0.96
CHD9-212ENST00000564641 ALBP02768 609 aa9.07□□□□□ -0.96
CHD9-212ENST00000564641 CD163Q86VB7 1156 aa9.07□□□□□ -0.96
CHD9-212ENST00000564641 MICAL2O94851 1124 aa9.06□□□□□ -0.96
CHD9-212ENST00000564641 ATG7O95352 703 aa9.06□□□□□ -0.96
CHD9-212ENST00000564641 MAP3K6O95382 1288 aa9.06□□□□□ -0.96
CHD9-212ENST00000564641 ARID4AP29374 1257 aaPredicted RBP9.06□□□□□ -0.96
CHD9-212ENST00000564641 BAG6P46379 1132 aa9.06□□□□□ -0.96
CHD9-212ENST00000564641 C20orf204Q6ZNR8 217 aa9.06□□□□□ -0.96
CHD9-212ENST00000564641 COL26A1Q96A83 441 aa9.06□□□□□ -0.96
CHD9-212ENST00000564641 SERPINA10Q9UK55 444 aa9.06□□□□□ -0.96
CHD9-212ENST00000564641 SLC6A14Q9UN76 642 aa9.06□□□□□ -0.96
CHD9-212ENST00000564641 ADAM23O75077 832 aa9.05□□□□□ -0.96
CHD9-212ENST00000564641 SRPK2P78362 688 aaKnown RBP9.05□□□□□ -0.96
CHD9-212ENST00000564641 TRIM28Q13263 835 aaKnown RBP9.05□□□□□ -0.96
CHD9-212ENST00000564641 CCDC97Q96F63 343 aaPredicted RBP9.05□□□□□ -0.96
CHD9-212ENST00000564641 IGFLR1Q9H665 355 aa9.05□□□□□ -0.96
CHD9-212ENST00000564641 APBA3O96018 575 aa9.04□□□□□ -0.96
CHD9-212ENST00000564641 NFKB1P19838 968 aa9.04□□□□□ -0.96
CHD9-212ENST00000564641 TBC1D8BQ0IIM8 1120 aa9.04□□□□□ -0.96
CHD9-212ENST00000564641 COL9A3Q14050 684 aaPredicted RBP9.04□□□□□ -0.96
CHD9-212ENST00000564641 IFT43Q96FT9 208 aa9.04□□□□□ -0.96
CHD9-212ENST00000564641 NACC1Q96RE7 527 aa9.04□□□□□ -0.96
CHD9-212ENST00000564641 DNAJB12Q9NXW2 375 aaKnown RBP9.04□□□□□ -0.96
CHD9-212ENST00000564641 ZMIZ1Q9ULJ6 1067 aa9.04□□□□□ -0.96
CHD9-212ENST00000564641 NID1P14543 1247 aa9.03□□□□□ -0.96
CHD9-212ENST00000564641 CHRNA4P43681 627 aa9.03□□□□□ -0.96
CHD9-212ENST00000564641 FKBP5Q13451 457 aaPredicted RBP9.03□□□□□ -0.96
CHD9-212ENST00000564641 K7ELQ4 463 aaPredicted RBP9.02□□□□□ -0.97
CHD9-212ENST00000564641 PTCD1O75127 700 aaKnown RBP9.02□□□□□ -0.97
CHD9-212ENST00000564641 FAM69CQ0P6D2 419 aa9.02□□□□□ -0.97
CHD9-212ENST00000564641 OCLNQ16625 522 aa9.02□□□□□ -0.97
CHD9-212ENST00000564641 PBXIP1Q96AQ6 731 aa9.02□□□□□ -0.97
CHD9-212ENST00000564641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.01□□□□□ -0.97
CHD9-212ENST00000564641 LOC100996750A0A140TA64 210 aa9.01□□□□□ -0.97
CHD9-212ENST00000564641 PRMT3O60678 531 aa9.01□□□□□ -0.97
CHD9-212ENST00000564641 EGFRP00533 1210 aa9.01□□□□□ -0.97
CHD9-212ENST00000564641 PRIMPOLQ96LW4 560 aa9.01□□□□□ -0.97
CHD9-212ENST00000564641 KRTAP4-6Q9BYQ5 205 aa9.01□□□□□ -0.97
CHD9-212ENST00000564641 JPH1Q9HDC5 661 aaPredicted RBP9.01□□□□□ -0.97
CHD9-212ENST00000564641 LRFN2Q9ULH4 789 aa9.01□□□□□ -0.97
CHD9-212ENST00000564641 RGS9O75916 674 aaPredicted RBP9□□□□□ -0.97
CHD9-212ENST00000564641 RARAP10276 462 aa9□□□□□ -0.97
CHD9-212ENST00000564641 BRD2P25440 801 aaKnown RBP9□□□□□ -0.97
CHD9-212ENST00000564641 GATA4P43694 442 aa9□□□□□ -0.97
CHD9-212ENST00000564641 COX20Q5RI15 118 aa9□□□□□ -0.97
CHD9-212ENST00000564641 TRAPPC3LQ5T215 181 aa9□□□□□ -0.97
CHD9-212ENST00000564641 C16orf46Q6P387 395 aa9□□□□□ -0.97
CHD9-212ENST00000564641 C8orf86Q6ZUL3 223 aa9□□□□□ -0.97
CHD9-212ENST00000564641 DHX32Q7L7V1 743 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms