RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 KLRG1Q96E93 195 aa7.97□□□□□ -1.13
LINC00560-201ENST00000564593 CITED4Q96RK1 184 aa7.97□□□□□ -1.13
LINC00560-201ENST00000564593 ZIC5Q96T25 663 aa7.97□□□□□ -1.13
LINC00560-201ENST00000564593 TGFBR3LH3BV60 316 aa7.97□□□□□ -1.13
LINC00560-201ENST00000564593 MICAL2O94851 1124 aa7.97□□□□□ -1.13
LINC00560-201ENST00000564593 DNM1Q05193 864 aaKnown RBP7.97□□□□□ -1.13
LINC00560-201ENST00000564593 NPAS4Q8IUM7 802 aa7.97□□□□□ -1.13
LINC00560-201ENST00000564593 RGL4Q8IZJ4 473 aa7.97□□□□□ -1.13
LINC00560-201ENST00000564593 SCARF2Q96GP6 870 aaPredicted RBP7.97□□□□□ -1.13
LINC00560-201ENST00000564593 HSH2DQ96JZ2 352 aa7.97□□□□□ -1.13
LINC00560-201ENST00000564593 GPAMQ9HCL2 828 aa7.97□□□□□ -1.13
LINC00560-201ENST00000564593 MZF1P28698 734 aaPredicted RBP7.96□□□□□ -1.14
LINC00560-201ENST00000564593 TMC7Q7Z402 723 aa7.96□□□□□ -1.14
LINC00560-201ENST00000564593 EDEM1Q92611 657 aa7.96□□□□□ -1.14
LINC00560-201ENST00000564593 GAS2L1Q99501 681 aaPredicted RBP7.96□□□□□ -1.14
LINC00560-201ENST00000564593 BCL2L13Q9BXK5 485 aa7.96□□□□□ -1.14
LINC00560-201ENST00000564593 POLIQ9UNA4 740 aa7.96□□□□□ -1.14
LINC00560-201ENST00000564593 DYRK1BQ9Y463 629 aa7.96□□□□□ -1.14
LINC00560-201ENST00000564593 A0A1W2PNR3 127 aa7.95□□□□□ -1.14
LINC00560-201ENST00000564593 F11P03951 625 aa7.95□□□□□ -1.14
LINC00560-201ENST00000564593 RANGAP1P46060 587 aaPredicted RBP7.95□□□□□ -1.14
LINC00560-201ENST00000564593 LRRC69Q6ZNQ3 347 aa7.95□□□□□ -1.14
LINC00560-201ENST00000564593 PGBD3Q8N328 593 aa7.95□□□□□ -1.14
LINC00560-201ENST00000564593 GPR152Q8TDT2 470 aa7.95□□□□□ -1.14
LINC00560-201ENST00000564593 FAM13BQ9NYF5 915 aa7.95□□□□□ -1.14
LINC00560-201ENST00000564593 GJA3Q9Y6H8 435 aa7.95□□□□□ -1.14
LINC00560-201ENST00000564593 RBM47A0AV96 593 aaKnown RBP7.94□□□□□ -1.14
LINC00560-201ENST00000564593 SLC35F4A4IF30 521 aa7.94□□□□□ -1.14
LINC00560-201ENST00000564593 PDGFAP04085 211 aa7.94□□□□□ -1.14
LINC00560-201ENST00000564593 PCSK2P16519 638 aa7.94□□□□□ -1.14
LINC00560-201ENST00000564593 USP5P45974 858 aa7.94□□□□□ -1.14
LINC00560-201ENST00000564593 PDE3BQ13370 1112 aa7.94□□□□□ -1.14
LINC00560-201ENST00000564593 IER5Q5VY09 327 aa7.94□□□□□ -1.14
LINC00560-201ENST00000564593 RUBCNLQ9H714 662 aa7.94□□□□□ -1.14
LINC00560-201ENST00000564593 ITGA6P23229 1130 aa7.93□□□□□ -1.14
LINC00560-201ENST00000564593 IDH3AP50213 366 aa7.93□□□□□ -1.14
LINC00560-201ENST00000564593 VWA5B2Q8N398 1253 aa7.93□□□□□ -1.14
LINC00560-201ENST00000564593 DMRTB1Q96MA1 342 aa7.93□□□□□ -1.14
LINC00560-201ENST00000564593 DMGDHQ9UI17 866 aaKnown RBP7.93□□□□□ -1.14
LINC00560-201ENST00000564593 OPLAHO14841 1288 aa7.93□□□□□ -1.14
LINC00560-201ENST00000564593 SV2AQ7L0J3 742 aa7.93□□□□□ -1.14
LINC00560-201ENST00000564593 BTLAQ7Z6A9 289 aa7.93□□□□□ -1.14
LINC00560-201ENST00000564593 TTC16Q8NEE8 873 aa7.93□□□□□ -1.14
LINC00560-201ENST00000564593 PIK3R5Q8WYR1 880 aa7.93□□□□□ -1.14
LINC00560-201ENST00000564593 NUDT16Q96DE0 195 aaKnown RBP7.93□□□□□ -1.14
LINC00560-201ENST00000564593 CRISPLD1Q9H336 500 aa7.93□□□□□ -1.14
LINC00560-201ENST00000564593 SENP3-EIF4A1A0A087X0R7 540 aa7.92□□□□□ -1.14
LINC00560-201ENST00000564593 GJD3Q8N144 294 aa7.92□□□□□ -1.14
LINC00560-201ENST00000564593 GIPC2Q8TF65 315 aa7.92□□□□□ -1.14
LINC00560-201ENST00000564593 FAM129BQ96TA1 746 aa7.92□□□□□ -1.14
LINC00560-201ENST00000564593 TREHO43280 583 aa7.91□□□□□ -1.14
LINC00560-201ENST00000564593 INPP5BP32019 993 aa7.91□□□□□ -1.14
LINC00560-201ENST00000564593 ARSDP51689 593 aa7.91□□□□□ -1.14
LINC00560-201ENST00000564593 PLCB3Q01970 1234 aa7.91□□□□□ -1.14
LINC00560-201ENST00000564593 COL19A1Q14993 1142 aa7.91□□□□□ -1.14
LINC00560-201ENST00000564593 C8orf34Q49A92 452 aa7.91□□□□□ -1.14
LINC00560-201ENST00000564593 EAPPQ56P03 285 aaPredicted RBP7.91□□□□□ -1.14
LINC00560-201ENST00000564593 CEP63Q96MT8 703 aa7.91□□□□□ -1.14
LINC00560-201ENST00000564593 CDC14CA4D256 554 aa7.9□□□□□ -1.14
LINC00560-201ENST00000564593 ADAM23O75077 832 aa7.9□□□□□ -1.14
LINC00560-201ENST00000564593 RPLP1P05386 114 aaKnown RBP7.9□□□□□ -1.14
LINC00560-201ENST00000564593 ZNF16P17020 682 aaPredicted RBP7.9□□□□□ -1.14
LINC00560-201ENST00000564593 ZNF326Q5BKZ1 582 aaKnown RBP7.9□□□□□ -1.14
LINC00560-201ENST00000564593 EFHC2Q5JST6 749 aa7.9□□□□□ -1.14
LINC00560-201ENST00000564593 RIPOR1Q6ZS17 1223 aa7.9□□□□□ -1.14
LINC00560-201ENST00000564593 NLRP8Q86W28 1048 aa7.9□□□□□ -1.14
LINC00560-201ENST00000564593 USP20Q9Y2K6 914 aa7.9□□□□□ -1.14
LINC00560-201ENST00000564593 E9PSI1 815 aa7.89□□□□□ -1.15
LINC00560-201ENST00000564593 GPR182O15218 404 aa7.89□□□□□ -1.15
LINC00560-201ENST00000564593 ADAMTS2O95450 1211 aa7.89□□□□□ -1.15
LINC00560-201ENST00000564593 DSC3Q14574 896 aa7.89□□□□□ -1.15
LINC00560-201ENST00000564593 FBXO33Q7Z6M2 555 aa7.89□□□□□ -1.15
LINC00560-201ENST00000564593 CMTR1Q8N1G2 835 aaKnown RBP7.89□□□□□ -1.15
LINC00560-201ENST00000564593 NIF3L1Q9GZT8 377 aa7.89□□□□□ -1.15
LINC00560-201ENST00000564593 GGNBP2Q9H3C7 697 aa7.89□□□□□ -1.15
LINC00560-201ENST00000564593 RTCBQ9Y3I0 505 aaKnown RBP7.89□□□□□ -1.15
LINC00560-201ENST00000564593 MSTNO14793 375 aa7.88□□□□□ -1.15
LINC00560-201ENST00000564593 IGHA2P01877 340 aa7.88□□□□□ -1.15
LINC00560-201ENST00000564593 P4HBP07237 508 aaKnown RBP7.88□□□□□ -1.15
LINC00560-201ENST00000564593 MAPK8P45983 427 aa7.88□□□□□ -1.15
LINC00560-201ENST00000564593 TYRO3Q06418 890 aa7.88□□□□□ -1.15
LINC00560-201ENST00000564593 EHHADHQ08426 723 aa7.88□□□□□ -1.15
LINC00560-201ENST00000564593 EPB42P16452 691 aa7.88□□□□□ -1.15
LINC00560-201ENST00000564593 MAP3K10Q02779 954 aa7.88□□□□□ -1.15
LINC00560-201ENST00000564593 FMR1Q06787 632 aaKnown RBP eCLIP7.88□□□□□ -1.15
LINC00560-201ENST00000564593 LYPD4Q6UWN0 246 aa7.88□□□□□ -1.15
LINC00560-201ENST00000564593 ALKBH8Q96BT7 664 aaKnown RBP7.88□□□□□ -1.15
LINC00560-201ENST00000564593 FNDC3AQ9Y2H6 1198 aaKnown RBP7.88□□□□□ -1.15
LINC00560-201ENST00000564593 A6NHS1 94 aa7.87□□□□□ -1.15
LINC00560-201ENST00000564593 UNCXA6NJT0 531 aa7.87□□□□□ -1.15
LINC00560-201ENST00000564593 TAGLNQ01995 201 aaKnown RBP7.87□□□□□ -1.15
LINC00560-201ENST00000564593 SRSF11Q05519 484 aaKnown RBP7.87□□□□□ -1.15
LINC00560-201ENST00000564593 LBRQ14739 615 aaKnown RBP7.87□□□□□ -1.15
LINC00560-201ENST00000564593 SAMD5Q5TGI4 173 aa7.87□□□□□ -1.15
LINC00560-201ENST00000564593 ZCCHC2Q9C0B9 1178 aaKnown RBP7.87□□□□□ -1.15
LINC00560-201ENST00000564593 BRD7Q9NPI1 651 aa7.87□□□□□ -1.15
LINC00560-201ENST00000564593 H7C1W4 665 aa7.86□□□□□ -1.15
LINC00560-201ENST00000564593 PLA2G4EQ3MJ16 856 aa7.86□□□□□ -1.15
LINC00560-201ENST00000564593 FIGNL1Q6PIW4 674 aa7.86□□□□□ -1.15
LINC00560-201ENST00000564593 UBAP1LF5GYI3 381 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms