RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 UTP14AQ9BVJ6 771 aaKnown RBP17.59■□□□□ 0.41
CNOT1-206ENST00000564557 MYH16Q9H6N6 1097 aa17.59■□□□□ 0.41
CNOT1-206ENST00000564557 UTRNP46939 3433 aa17.58■□□□□ 0.41
CNOT1-206ENST00000564557 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
CNOT1-206ENST00000564557 SRGNP10124 158 aa17.58■□□□□ 0.4
CNOT1-206ENST00000564557 NPR1P16066 1061 aa17.58■□□□□ 0.4
CNOT1-206ENST00000564557 TCIRG1Q13488 830 aa17.58■□□□□ 0.4
CNOT1-206ENST00000564557 ERFEQ4G0M1 354 aa17.58■□□□□ 0.4
CNOT1-206ENST00000564557 UBN2Q6ZU65 1347 aa17.57■□□□□ 0.4
CNOT1-206ENST00000564557 ARFGEF1Q9Y6D6 1849 aa17.57■□□□□ 0.4
CNOT1-206ENST00000564557 ALDH1B1P30837 517 aa17.57■□□□□ 0.4
CNOT1-206ENST00000564557 TSPYL6Q8N831 410 aa17.57■□□□□ 0.4
CNOT1-206ENST00000564557 ANKRD31Q8N7Z5 1873 aa17.56■□□□□ 0.4
CNOT1-206ENST00000564557 IBTKQ9P2D0 1353 aaPredicted RBP17.56■□□□□ 0.4
CNOT1-206ENST00000564557 FANCIQ9NVI1 1328 aa17.56■□□□□ 0.4
CNOT1-206ENST00000564557 RPGRQ92834 1020 aaKnown RBP17.56■□□□□ 0.4
CNOT1-206ENST00000564557 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
CNOT1-206ENST00000564557 TRMT112Q9UI30 125 aaKnown RBP17.56■□□□□ 0.4
CNOT1-206ENST00000564557 GOLGB1Q14789 3259 aaKnown RBP17.55■□□□□ 0.4
CNOT1-206ENST00000564557 C21orf2O43822 256 aa17.55■□□□□ 0.4
CNOT1-206ENST00000564557 NTSR2O95665 410 aa17.55■□□□□ 0.4
CNOT1-206ENST00000564557 SOGA3Q5TF21 947 aa17.55■□□□□ 0.4
CNOT1-206ENST00000564557 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
CNOT1-206ENST00000564557 PHAXQ9H814 394 aaKnown RBP17.55■□□□□ 0.4
CNOT1-206ENST00000564557 DLEC1Q9Y238 1755 aa17.55■□□□□ 0.4
CNOT1-206ENST00000564557 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
CNOT1-206ENST00000564557 TCERG1O14776 1098 aaKnown RBP17.54■□□□□ 0.4
CNOT1-206ENST00000564557 C9orf131Q5VYM1 1079 aa17.54■□□□□ 0.4
CNOT1-206ENST00000564557 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
CNOT1-206ENST00000564557 KLRG2A4D1S0 409 aaPredicted RBP17.53■□□□□ 0.4
CNOT1-206ENST00000564557 EXOSC9Q06265 439 aaKnown RBP17.53■□□□□ 0.4
CNOT1-206ENST00000564557 ZNF526Q8TF50 670 aaPredicted RBP17.53■□□□□ 0.4
CNOT1-206ENST00000564557 RBM17Q96I25 401 aaKnown RBP17.53■□□□□ 0.4
CNOT1-206ENST00000564557 RNF181Q9P0P0 153 aa17.53■□□□□ 0.4
CNOT1-206ENST00000564557 SH3TC1Q8TE82 1336 aa17.52■□□□□ 0.4
CNOT1-206ENST00000564557 ATP5J2-PTCD1G3V325 749 aa17.52■□□□□ 0.4
CNOT1-206ENST00000564557 TMX4Q9H1E5 349 aaPredicted RBP17.52■□□□□ 0.4
CNOT1-206ENST00000564557 GPBP1L1Q9HC44 474 aaPredicted RBP17.52■□□□□ 0.4
CNOT1-206ENST00000564557 ABCC12Q96J65 1359 aa17.52■□□□□ 0.39
CNOT1-206ENST00000564557 LMNB1P20700 586 aa17.51■□□□□ 0.39
CNOT1-206ENST00000564557 MYD88Q99836 296 aa17.51■□□□□ 0.39
CNOT1-206ENST00000564557 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
CNOT1-206ENST00000564557 HSP90B1P14625 803 aaKnown RBP17.5■□□□□ 0.39
CNOT1-206ENST00000564557 RASSF7Q02833 373 aa17.5■□□□□ 0.39
CNOT1-206ENST00000564557 NEXNQ0ZGT2 675 aa17.5■□□□□ 0.39
CNOT1-206ENST00000564557 SLC10A5Q5PT55 438 aa17.5■□□□□ 0.39
CNOT1-206ENST00000564557 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
CNOT1-206ENST00000564557 ISCA1Q9BUE6 129 aa17.5■□□□□ 0.39
CNOT1-206ENST00000564557 ANKRD36CQ5JPF3 1778 aa17.5■□□□□ 0.39
CNOT1-206ENST00000564557 VAMP4O75379 141 aa17.49■□□□□ 0.39
CNOT1-206ENST00000564557 CRY2Q49AN0 593 aa17.49■□□□□ 0.39
CNOT1-206ENST00000564557 CCDC93Q567U6 631 aa17.49■□□□□ 0.39
CNOT1-206ENST00000564557 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
CNOT1-206ENST00000564557 TAOK3Q9H2K8 898 aa17.49■□□□□ 0.39
CNOT1-206ENST00000564557 MAP3K2Q9Y2U5 619 aa17.49■□□□□ 0.39
CNOT1-206ENST00000564557 RIC1Q4ADV7 1423 aa17.48■□□□□ 0.39
CNOT1-206ENST00000564557 CACNA1SQ13698 1873 aa17.48■□□□□ 0.39
CNOT1-206ENST00000564557 E9PSI1 815 aa17.48■□□□□ 0.39
CNOT1-206ENST00000564557 HCLS1P14317 486 aaPredicted RBP17.48■□□□□ 0.39
CNOT1-206ENST00000564557 TRIM28Q13263 835 aaKnown RBP17.48■□□□□ 0.39
CNOT1-206ENST00000564557 RTKN2Q8IZC4 609 aa17.48■□□□□ 0.39
CNOT1-206ENST00000564557 FAM89AQ96GI7 184 aa17.48■□□□□ 0.39
CNOT1-206ENST00000564557 METTL22Q9BUU2 404 aaPredicted RBP17.48■□□□□ 0.39
CNOT1-206ENST00000564557 SLX4Q8IY92 1834 aa17.47■□□□□ 0.39
CNOT1-206ENST00000564557 PI4KAP2A4QPH2 592 aa17.47■□□□□ 0.39
CNOT1-206ENST00000564557 HOXA10P31260 410 aaPredicted RBP17.47■□□□□ 0.39
CNOT1-206ENST00000564557 FKBP5Q13451 457 aaPredicted RBP17.47■□□□□ 0.39
CNOT1-206ENST00000564557 RTL5Q5HYW3 569 aaPredicted RBP17.47■□□□□ 0.39
CNOT1-206ENST00000564557 DDX46Q7L014 1031 aaKnown RBP17.47■□□□□ 0.39
CNOT1-206ENST00000564557 MIER1Q8N108 512 aa17.47■□□□□ 0.39
CNOT1-206ENST00000564557 PI4KAP1Q8N8J0 262 aa17.47■□□□□ 0.39
CNOT1-206ENST00000564557 CCDC191Q8NCU4 936 aa17.47■□□□□ 0.39
CNOT1-206ENST00000564557 CRAMP1Q96RY5 1269 aa17.47■□□□□ 0.39
CNOT1-206ENST00000564557 CWC25Q9NXE8 425 aaPredicted RBP17.47■□□□□ 0.39
CNOT1-206ENST00000564557 ADCY9O60503 1353 aa17.47■□□□□ 0.39
CNOT1-206ENST00000564557 NFKBIEO00221 500 aa17.46■□□□□ 0.39
CNOT1-206ENST00000564557 FLIIQ13045 1269 aa17.46■□□□□ 0.39
CNOT1-206ENST00000564557 CC2D2BQ6DHV5 1058 aa17.46■□□□□ 0.39
CNOT1-206ENST00000564557 ZNF521Q96K83 1311 aa17.46■□□□□ 0.38
CNOT1-206ENST00000564557 G2E3Q7L622 706 aa17.45■□□□□ 0.38
CNOT1-206ENST00000564557 SYNE4Q8N205 404 aa17.45■□□□□ 0.38
CNOT1-206ENST00000564557 ZBTB38Q8NAP3 1195 aaPredicted RBP17.45■□□□□ 0.38
CNOT1-206ENST00000564557 ARFGEF2Q9Y6D5 1785 aa17.45■□□□□ 0.38
CNOT1-206ENST00000564557 TNRC6CQ9HCJ0 1690 aaKnown RBP17.45■□□□□ 0.38
CNOT1-206ENST00000564557 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
CNOT1-206ENST00000564557 IRS4O14654 1257 aaPredicted RBP17.44■□□□□ 0.38
CNOT1-206ENST00000564557 PPEF1O14829 653 aaPredicted RBP17.44■□□□□ 0.38
CNOT1-206ENST00000564557 GRIPAP1Q4V328 841 aa17.44■□□□□ 0.38
CNOT1-206ENST00000564557 C3orf67Q6ZVT6 689 aa17.44■□□□□ 0.38
CNOT1-206ENST00000564557 C7orf43Q8WVR3 580 aa17.44■□□□□ 0.38
CNOT1-206ENST00000564557 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
CNOT1-206ENST00000564557 ZC3H4Q9UPT8 1303 aaKnown RBP17.44■□□□□ 0.38
CNOT1-206ENST00000564557 BBOX1O75936 387 aa17.43■□□□□ 0.38
CNOT1-206ENST00000564557 FKBP4Q02790 459 aaKnown RBP eCLIP17.43■□□□□ 0.38
CNOT1-206ENST00000564557 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
CNOT1-206ENST00000564557 DPY19L2Q6NUT2 758 aa17.43■□□□□ 0.38
CNOT1-206ENST00000564557 CACNA1FO60840 1977 aa17.42■□□□□ 0.38
CNOT1-206ENST00000564557 SBF1O95248 1867 aa17.42■□□□□ 0.38
CNOT1-206ENST00000564557 SLFN5Q08AF3 891 aa17.42■□□□□ 0.38
CNOT1-206ENST00000564557 PCCAP05165 728 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms