RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 WWC1Q8IX03 1113 aa16.47■□□□□ 0.23
HERC2-206ENST00000564519 IBTKQ9P2D0 1353 aaPredicted RBP16.47■□□□□ 0.23
HERC2-206ENST00000564519 CCDC27Q2M243 656 aa16.46■□□□□ 0.23
HERC2-206ENST00000564519 OLFM4Q6UX06 510 aa16.46■□□□□ 0.23
HERC2-206ENST00000564519 C7orf43Q8WVR3 580 aa16.46■□□□□ 0.23
HERC2-206ENST00000564519 TSR2Q969E8 191 aaKnown RBP16.46■□□□□ 0.23
HERC2-206ENST00000564519 ZNF428Q96B54 188 aa16.46■□□□□ 0.23
HERC2-206ENST00000564519 DBF4Q9UBU7 674 aaPredicted RBP16.46■□□□□ 0.23
HERC2-206ENST00000564519 NUP98P52948 1817 aa16.46■□□□□ 0.23
HERC2-206ENST00000564519 CRY2Q49AN0 593 aa16.45■□□□□ 0.22
HERC2-206ENST00000564519 PARP10Q53GL7 1025 aa16.45■□□□□ 0.22
HERC2-206ENST00000564519 SOGA3Q5TF21 947 aa16.45■□□□□ 0.22
HERC2-206ENST00000564519 NLRP10Q86W26 655 aa16.45■□□□□ 0.22
HERC2-206ENST00000564519 TSPYL6Q8N831 410 aa16.45■□□□□ 0.22
HERC2-206ENST00000564519 TAOK3Q9H2K8 898 aa16.45■□□□□ 0.22
HERC2-206ENST00000564519 SALL2Q9Y467 1007 aaPredicted RBP16.45■□□□□ 0.22
HERC2-206ENST00000564519 TCIRG1Q13488 830 aa16.44■□□□□ 0.22
HERC2-206ENST00000564519 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
HERC2-206ENST00000564519 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
HERC2-206ENST00000564519 SYNE4Q8N205 404 aa16.44■□□□□ 0.22
HERC2-206ENST00000564519 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
HERC2-206ENST00000564519 SLX4Q8IY92 1834 aa16.44■□□□□ 0.22
HERC2-206ENST00000564519 HSP90AB3PQ58FF7 597 aa16.43■□□□□ 0.22
HERC2-206ENST00000564519 COL13A1Q5TAT6 717 aaPredicted RBP16.43■□□□□ 0.22
HERC2-206ENST00000564519 ANKRD13DQ6ZTN6 518 aa16.43■□□□□ 0.22
HERC2-206ENST00000564519 TNS4Q8IZW8 715 aa16.43■□□□□ 0.22
HERC2-206ENST00000564519 PLBD2Q8NHP8 589 aa16.43■□□□□ 0.22
HERC2-206ENST00000564519 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
HERC2-206ENST00000564519 HYPKQ9NX55 129 aa16.43■□□□□ 0.22
HERC2-206ENST00000564519 RIC1Q4ADV7 1423 aa16.43■□□□□ 0.22
HERC2-206ENST00000564519 CAPN15O75808 1086 aa16.42■□□□□ 0.22
HERC2-206ENST00000564519 ALDH1B1P30837 517 aa16.42■□□□□ 0.22
HERC2-206ENST00000564519 SLC10A5Q5PT55 438 aa16.42■□□□□ 0.22
HERC2-206ENST00000564519 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
HERC2-206ENST00000564519 LTBP3Q9NS15 1303 aa16.42■□□□□ 0.22
HERC2-206ENST00000564519 ATP5J2-PTCD1G3V325 749 aa16.41■□□□□ 0.22
HERC2-206ENST00000564519 HOXA10P31260 410 aaPredicted RBP16.41■□□□□ 0.22
HERC2-206ENST00000564519 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
HERC2-206ENST00000564519 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
HERC2-206ENST00000564519 ISCA1Q9BUE6 129 aa16.41■□□□□ 0.22
HERC2-206ENST00000564519 SBF1O95248 1867 aa16.4■□□□□ 0.22
HERC2-206ENST00000564519 TCERG1O14776 1098 aaKnown RBP16.4■□□□□ 0.22
HERC2-206ENST00000564519 HCLS1P14317 486 aaPredicted RBP16.4■□□□□ 0.22
HERC2-206ENST00000564519 RPGRQ92834 1020 aaKnown RBP16.4■□□□□ 0.22
HERC2-206ENST00000564519 TRMT112Q9UI30 125 aaKnown RBP16.4■□□□□ 0.22
HERC2-206ENST00000564519 ARFGEF2Q9Y6D5 1785 aa16.39■□□□□ 0.21
HERC2-206ENST00000564519 IQCA1LA6NCM1 817 aa16.39■□□□□ 0.21
HERC2-206ENST00000564519 HSPA1AP0DMV8 641 aaKnown RBP16.39■□□□□ 0.21
HERC2-206ENST00000564519 HSPA1BP0DMV9 641 aaKnown RBP16.39■□□□□ 0.21
HERC2-206ENST00000564519 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
HERC2-206ENST00000564519 RBM17Q96I25 401 aaKnown RBP16.39■□□□□ 0.21
HERC2-206ENST00000564519 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
HERC2-206ENST00000564519 IL16Q14005 1332 aa16.39■□□□□ 0.21
HERC2-206ENST00000564519 SNED1Q8TER0 1413 aa16.38■□□□□ 0.21
HERC2-206ENST00000564519 CACNA1SQ13698 1873 aa16.38■□□□□ 0.21
HERC2-206ENST00000564519 FER1L6Q2WGJ9 1857 aa16.38■□□□□ 0.21
HERC2-206ENST00000564519 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
HERC2-206ENST00000564519 CCDC30Q5VVM6 783 aa16.38■□□□□ 0.21
HERC2-206ENST00000564519 CRAMP1Q96RY5 1269 aa16.38■□□□□ 0.21
HERC2-206ENST00000564519 SPINK5Q9NQ38 1064 aaPredicted RBP16.38■□□□□ 0.21
HERC2-206ENST00000564519 ZNF277Q9NRM2 450 aaPredicted RBP16.38■□□□□ 0.21
HERC2-206ENST00000564519 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
HERC2-206ENST00000564519 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
HERC2-206ENST00000564519 DDNO94850 711 aaPredicted RBP16.37■□□□□ 0.21
HERC2-206ENST00000564519 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
HERC2-206ENST00000564519 TWISTNBQ3B726 338 aaPredicted RBP16.37■□□□□ 0.21
HERC2-206ENST00000564519 RIC3Q7Z5B4 369 aa16.37■□□□□ 0.21
HERC2-206ENST00000564519 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
HERC2-206ENST00000564519 ANKRD36CQ5JPF3 1778 aa16.36■□□□□ 0.21
HERC2-206ENST00000564519 POTECB2RU33 542 aa16.36■□□□□ 0.21
HERC2-206ENST00000564519 PPEF1O14829 653 aaPredicted RBP16.36■□□□□ 0.21
HERC2-206ENST00000564519 WDR63Q8IWG1 891 aa16.36■□□□□ 0.21
HERC2-206ENST00000564519 RTKN2Q8IZC4 609 aa16.36■□□□□ 0.21
HERC2-206ENST00000564519 FAM89AQ96GI7 184 aa16.36■□□□□ 0.21
HERC2-206ENST00000564519 CREBZFQ9NS37 354 aa16.36■□□□□ 0.21
HERC2-206ENST00000564519 ABCC4O15439 1325 aa16.36■□□□□ 0.21
HERC2-206ENST00000564519 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
HERC2-206ENST00000564519 RTL5Q5HYW3 569 aaPredicted RBP16.35■□□□□ 0.21
HERC2-206ENST00000564519 MYD88Q99836 296 aa16.35■□□□□ 0.21
HERC2-206ENST00000564519 TRIM28Q13263 835 aaKnown RBP16.34■□□□□ 0.21
HERC2-206ENST00000564519 G2E3Q7L622 706 aa16.34■□□□□ 0.21
HERC2-206ENST00000564519 MKRN1Q9UHC7 482 aaKnown RBP16.34■□□□□ 0.21
HERC2-206ENST00000564519 IARSP41252 1262 aaKnown RBP16.33■□□□□ 0.2
HERC2-206ENST00000564519 EXOSC9Q06265 439 aaKnown RBP16.33■□□□□ 0.2
HERC2-206ENST00000564519 LDHDQ86WU2 507 aa16.33■□□□□ 0.2
HERC2-206ENST00000564519 CLEC11AQ9Y240 323 aa16.33■□□□□ 0.2
HERC2-206ENST00000564519 PCNTO95613 3336 aa16.33■□□□□ 0.2
HERC2-206ENST00000564519 EAPPQ56P03 285 aaPredicted RBP16.32■□□□□ 0.2
HERC2-206ENST00000564519 CC2D2BQ6DHV5 1058 aa16.32■□□□□ 0.2
HERC2-206ENST00000564519 JARID2Q92833 1246 aaPredicted RBP16.32■□□□□ 0.2
HERC2-206ENST00000564519 PSMD1Q99460 953 aa16.32■□□□□ 0.2
HERC2-206ENST00000564519 METTL22Q9BUU2 404 aaPredicted RBP16.32■□□□□ 0.2
HERC2-206ENST00000564519 MAP3K2Q9Y2U5 619 aa16.32■□□□□ 0.2
HERC2-206ENST00000564519 ATP6V0A2Q9Y487 856 aa16.32■□□□□ 0.2
HERC2-206ENST00000564519 ZNF541Q9H0D2 1346 aa16.31■□□□□ 0.2
HERC2-206ENST00000564519 PI4KAP2A4QPH2 592 aa16.31■□□□□ 0.2
HERC2-206ENST00000564519 IRS4O14654 1257 aaPredicted RBP16.31■□□□□ 0.2
HERC2-206ENST00000564519 VAMP4O75379 141 aa16.31■□□□□ 0.2
HERC2-206ENST00000564519 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
HERC2-206ENST00000564519 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms