RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 UTP14AQ9BVJ6 771 aaKnown RBP32.79■■■□□ 2.84
AC009041.3-201ENST00000564390 LTBP3Q9NS15 1303 aa32.78■■■□□ 2.84
AC009041.3-201ENST00000564390 CCDC93Q567U6 631 aa32.78■■■□□ 2.84
AC009041.3-201ENST00000564390 HSP90AB3PQ58FF7 597 aa32.78■■■□□ 2.84
AC009041.3-201ENST00000564390 C8orf58Q8NAV2 365 aa32.78■■■□□ 2.84
AC009041.3-201ENST00000564390 TSR2Q969E8 191 aaKnown RBP32.78■■■□□ 2.84
AC009041.3-201ENST00000564390 ZNF428Q96B54 188 aa32.78■■■□□ 2.84
AC009041.3-201ENST00000564390 DICER1Q9UPY3 1922 aaKnown RBP32.78■■■□□ 2.84
AC009041.3-201ENST00000564390 NLRP10Q86W26 655 aa32.77■■■□□ 2.84
AC009041.3-201ENST00000564390 RPGRQ92834 1020 aaKnown RBP32.77■■■□□ 2.84
AC009041.3-201ENST00000564390 TCIRG1Q13488 830 aa32.76■■■□□ 2.83
AC009041.3-201ENST00000564390 WWC1Q8IX03 1113 aa32.76■■■□□ 2.83
AC009041.3-201ENST00000564390 ALDH1B1P30837 517 aa32.75■■■□□ 2.83
AC009041.3-201ENST00000564390 CCDC27Q2M243 656 aa32.75■■■□□ 2.83
AC009041.3-201ENST00000564390 PLBD2Q8NHP8 589 aa32.75■■■□□ 2.83
AC009041.3-201ENST00000564390 HYPKQ9NX55 129 aa32.75■■■□□ 2.83
AC009041.3-201ENST00000564390 LAMB2P55268 1798 aa32.75■■■□□ 2.83
AC009041.3-201ENST00000564390 RRAGCQ9HB90 399 aa32.74■■■□□ 2.83
AC009041.3-201ENST00000564390 ANKRD13DQ6ZTN6 518 aa32.73■■■□□ 2.83
AC009041.3-201ENST00000564390 SYNE4Q8N205 404 aa32.73■■■□□ 2.83
AC009041.3-201ENST00000564390 SALL2Q9Y467 1007 aaPredicted RBP32.73■■■□□ 2.83
AC009041.3-201ENST00000564390 SLC51AQ86UW1 340 aa32.72■■■□□ 2.83
AC009041.3-201ENST00000564390 TSPYL6Q8N831 410 aa32.72■■■□□ 2.83
AC009041.3-201ENST00000564390 GLTPD2A6NH11 291 aa32.71■■■□□ 2.83
AC009041.3-201ENST00000564390 HOXA10P31260 410 aaPredicted RBP32.71■■■□□ 2.83
AC009041.3-201ENST00000564390 PHAXQ9H814 394 aaKnown RBP32.71■■■□□ 2.83
AC009041.3-201ENST00000564390 TOMM70O94826 608 aa32.7■■■□□ 2.83
AC009041.3-201ENST00000564390 NLRP3Q96P20 1036 aa32.7■■■□□ 2.83
AC009041.3-201ENST00000564390 TRMT112Q9UI30 125 aaKnown RBP32.7■■■□□ 2.83
AC009041.3-201ENST00000564390 RNF123Q5XPI4 1314 aa32.7■■■□□ 2.82
AC009041.3-201ENST00000564390 ATP5J2-PTCD1G3V325 749 aa32.69■■■□□ 2.82
AC009041.3-201ENST00000564390 HCLS1P14317 486 aaPredicted RBP32.69■■■□□ 2.82
AC009041.3-201ENST00000564390 FKBP4Q02790 459 aaKnown RBP eCLIP32.69■■■□□ 2.82
AC009041.3-201ENST00000564390 RBM17Q96I25 401 aaKnown RBP32.69■■■□□ 2.82
AC009041.3-201ENST00000564390 ZNF277Q9NRM2 450 aaPredicted RBP32.69■■■□□ 2.82
AC009041.3-201ENST00000564390 SNED1Q8TER0 1413 aa32.68■■■□□ 2.82
AC009041.3-201ENST00000564390 SLC10A5Q5PT55 438 aa32.68■■■□□ 2.82
AC009041.3-201ENST00000564390 C16orf71Q8IYS4 520 aaPredicted RBP32.68■■■□□ 2.82
AC009041.3-201ENST00000564390 FAM9BQ8IZU0 186 aa32.68■■■□□ 2.82
AC009041.3-201ENST00000564390 TCERG1O14776 1098 aaKnown RBP32.67■■■□□ 2.82
AC009041.3-201ENST00000564390 RTKN2Q8IZC4 609 aa32.67■■■□□ 2.82
AC009041.3-201ENST00000564390 DDX60Q8IY21 1712 aaKnown RBP32.67■■■□□ 2.82
AC009041.3-201ENST00000564390 SH3TC1Q8TE82 1336 aa32.67■■■□□ 2.82
AC009041.3-201ENST00000564390 GOLGA2Q08379 1002 aa32.66■■■□□ 2.82
AC009041.3-201ENST00000564390 CRAMP1Q96RY5 1269 aa32.66■■■□□ 2.82
AC009041.3-201ENST00000564390 ISCA1Q9BUE6 129 aa32.66■■■□□ 2.82
AC009041.3-201ENST00000564390 PPEF1O14829 653 aaPredicted RBP32.65■■■□□ 2.82
AC009041.3-201ENST00000564390 HSPA6P17066 643 aa32.65■■■□□ 2.82
AC009041.3-201ENST00000564390 IL16Q14005 1332 aa32.64■■■□□ 2.82
AC009041.3-201ENST00000564390 CCDC30Q5VVM6 783 aa32.64■■■□□ 2.82
AC009041.3-201ENST00000564390 RIC3Q7Z5B4 369 aa32.64■■■□□ 2.82
AC009041.3-201ENST00000564390 WDR90Q96KV7 1748 aa32.64■■■□□ 2.82
AC009041.3-201ENST00000564390 ABCC4O15439 1325 aa32.63■■■□□ 2.81
AC009041.3-201ENST00000564390 DPY19L2Q6NUT2 758 aa32.62■■■□□ 2.81
AC009041.3-201ENST00000564390 RBM46Q8TBY0 533 aaKnown RBP32.62■■■□□ 2.81
AC009041.3-201ENST00000564390 FANCIQ9NVI1 1328 aa32.61■■■□□ 2.81
AC009041.3-201ENST00000564390 NCBP3Q53F19 620 aaKnown RBP32.61■■■□□ 2.81
AC009041.3-201ENST00000564390 FAM89AQ96GI7 184 aa32.61■■■□□ 2.81
AC009041.3-201ENST00000564390 TWISTNBQ3B726 338 aaPredicted RBP32.6■■■□□ 2.81
AC009041.3-201ENST00000564390 RTL5Q5HYW3 569 aaPredicted RBP32.6■■■□□ 2.81
AC009041.3-201ENST00000564390 VEGFAP15692 232 aaPredicted RBP32.59■■■□□ 2.81
AC009041.3-201ENST00000564390 IARSP41252 1262 aaKnown RBP32.59■■■□□ 2.81
AC009041.3-201ENST00000564390 DDNO94850 711 aaPredicted RBP32.58■■■□□ 2.81
AC009041.3-201ENST00000564390 CC2D2BQ6DHV5 1058 aa32.58■■■□□ 2.81
AC009041.3-201ENST00000564390 PSMD1Q99460 953 aa32.58■■■□□ 2.81
AC009041.3-201ENST00000564390 MYD88Q99836 296 aa32.58■■■□□ 2.81
AC009041.3-201ENST00000564390 COL4A5P29400 1685 aa32.58■■■□□ 2.81
AC009041.3-201ENST00000564390 TAF1P21675 1872 aa32.58■■■□□ 2.81
AC009041.3-201ENST00000564390 ZNF541Q9H0D2 1346 aa32.57■■■□□ 2.8
AC009041.3-201ENST00000564390 POTECB2RU33 542 aa32.57■■■□□ 2.8
AC009041.3-201ENST00000564390 STK31Q9BXU1 1019 aa32.56■■■□□ 2.8
AC009041.3-201ENST00000564390 CHMP4AQ9BY43 222 aa32.56■■■□□ 2.8
AC009041.3-201ENST00000564390 TRIM28Q13263 835 aaKnown RBP32.55■■■□□ 2.8
AC009041.3-201ENST00000564390 WDR63Q8IWG1 891 aa32.55■■■□□ 2.8
AC009041.3-201ENST00000564390 DDX46Q7L014 1031 aaKnown RBP32.54■■■□□ 2.8
AC009041.3-201ENST00000564390 ATP6V0A2Q9Y487 856 aa32.54■■■□□ 2.8
AC009041.3-201ENST00000564390 CEP350Q5VT06 3117 aa32.54■■■□□ 2.8
AC009041.3-201ENST00000564390 DDX58O95786 925 aaKnown RBP32.53■■■□□ 2.8
AC009041.3-201ENST00000564390 COL4A1P02462 1669 aa32.53■■■□□ 2.8
AC009041.3-201ENST00000564390 SPINK5Q9NQ38 1064 aaPredicted RBP32.52■■■□□ 2.8
AC009041.3-201ENST00000564390 MAP3K2Q9Y2U5 619 aa32.52■■■□□ 2.8
AC009041.3-201ENST00000564390 IRS4O14654 1257 aaPredicted RBP32.51■■■□□ 2.79
AC009041.3-201ENST00000564390 FSTL1Q12841 308 aa32.51■■■□□ 2.79
AC009041.3-201ENST00000564390 GRAPQ13588 217 aa32.51■■■□□ 2.79
AC009041.3-201ENST00000564390 G2E3Q7L622 706 aa32.51■■■□□ 2.79
AC009041.3-201ENST00000564390 GRAPLQ8TC17 118 aaPredicted RBP32.51■■■□□ 2.79
AC009041.3-201ENST00000564390 METTL22Q9BUU2 404 aaPredicted RBP32.51■■■□□ 2.79
AC009041.3-201ENST00000564390 SMC1BQ8NDV3 1235 aa32.5■■■□□ 2.79
AC009041.3-201ENST00000564390 TMX4Q9H1E5 349 aaPredicted RBP32.5■■■□□ 2.79
AC009041.3-201ENST00000564390 EXOSC9Q06265 439 aaKnown RBP32.49■■■□□ 2.79
AC009041.3-201ENST00000564390 GRIPAP1Q4V328 841 aa32.49■■■□□ 2.79
AC009041.3-201ENST00000564390 ZBTB38Q8NAP3 1195 aaPredicted RBP32.49■■■□□ 2.79
AC009041.3-201ENST00000564390 JARID2Q92833 1246 aaPredicted RBP32.49■■■□□ 2.79
AC009041.3-201ENST00000564390 LRRC37AA6NMS7 1700 aa32.48■■■□□ 2.79
AC009041.3-201ENST00000564390 PI4KAP2A4QPH2 592 aa32.48■■■□□ 2.79
AC009041.3-201ENST00000564390 BBOX1O75936 387 aa32.48■■■□□ 2.79
AC009041.3-201ENST00000564390 SLC4A2P04920 1241 aa32.48■■■□□ 2.79
AC009041.3-201ENST00000564390 PI4KAP1Q8N8J0 262 aa32.48■■■□□ 2.79
AC009041.3-201ENST00000564390 JDP2Q8WYK2 163 aa32.48■■■□□ 2.79
AC009041.3-201ENST00000564390 FZD9O00144 591 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms