RNA–Protein interactions for RNA: ENST00000564061.5

POLR3E-208, Transcript of RNA polymerase III subunit E, humanhuman

TSL 1 (best)

Gene POLR3E, Length 4,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-208ENST00000564061 UBE2Q2Q8WVN8 375 aa14.7□□□□□ -0.06
POLR3E-208ENST00000564061 TRPM1Q7Z4N2 1603 aa14.7□□□□□ -0.06
POLR3E-208ENST00000564061 HOXC9P31274 260 aa14.69□□□□□ -0.06
POLR3E-208ENST00000564061 HSP90AB3PQ58FF7 597 aa14.69□□□□□ -0.06
POLR3E-208ENST00000564061 LMBR1LQ6UX01 489 aa14.69□□□□□ -0.06
POLR3E-208ENST00000564061 AIDAQ96BJ3 306 aa14.69□□□□□ -0.06
POLR3E-208ENST00000564061 FAM227BQ96M60 508 aa14.69□□□□□ -0.06
POLR3E-208ENST00000564061 NAP1L1P55209 391 aaKnown RBP14.69□□□□□ -0.06
POLR3E-208ENST00000564061 NFATC2IPQ8NCF5 419 aa14.69□□□□□ -0.06
POLR3E-208ENST00000564061 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.69□□□□□ -0.06
POLR3E-208ENST00000564061 SNX14Q9Y5W7 946 aa14.69□□□□□ -0.06
POLR3E-208ENST00000564061 V9GYY5 206 aaPredicted RBP14.69□□□□□ -0.06
POLR3E-208ENST00000564061 INTS4Q96HW7 963 aaKnown RBP14.69□□□□□ -0.06
POLR3E-208ENST00000564061 USP16Q9Y5T5 823 aa14.69□□□□□ -0.06
POLR3E-208ENST00000564061 TTC21AQ8NDW8 1320 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 UVSSAQ2YD98 709 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 KRT28Q7Z3Y7 464 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 BRMS1Q9HCU9 246 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 PTGS1P23219 599 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 CABLES1Q8TDN4 633 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 BICC1Q9H694 974 aaKnown RBP14.68□□□□□ -0.06
POLR3E-208ENST00000564061 RTL1A6NKG5 1358 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 RIMBP3CA6NJZ7 1639 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 RIMBP3BA6NNM3 1639 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 RIMBP3Q9UFD9 1639 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
POLR3E-208ENST00000564061 TSC1Q92574 1164 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 NOL10Q9BSC4 688 aaKnown RBP14.68□□□□□ -0.06
POLR3E-208ENST00000564061 SBNO2Q9Y2G9 1366 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 MINDY4BA8MYZ0 360 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 IGSF3O75054 1194 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 KCNA6P17658 529 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 CCDC129Q6ZRS4 1044 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 MICU3Q86XE3 530 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 LRP2BPQ9P2M1 347 aa14.68□□□□□ -0.06
POLR3E-208ENST00000564061 ORC3Q9UBD5 711 aaPredicted RBP14.68□□□□□ -0.06
POLR3E-208ENST00000564061 DYNC1I1O14576 645 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 ZNF213O14771 459 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 UNC5CLQ8IV45 518 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 FAM200AQ8TCP9 573 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 TYRO3Q06418 890 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 TMC6Q7Z403 805 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 AMOTL1Q8IY63 956 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 GPT2Q8TD30 523 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 ZBTB9Q96C00 473 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 KCNQ3O43525 872 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 ZNF445P59923 1031 aa14.67□□□□□ -0.06
POLR3E-208ENST00000564061 NACAP1Q9BZK3 213 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 NOL7Q9UMY1 257 aaKnown RBP14.66□□□□□ -0.06
POLR3E-208ENST00000564061 SYNMO15061 1565 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 FSD2A1L4K1 749 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 SGSM2O43147 1006 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 URI1O94763 535 aaPredicted RBP14.66□□□□□ -0.06
POLR3E-208ENST00000564061 IFIT5Q13325 482 aaKnown RBP14.66□□□□□ -0.06
POLR3E-208ENST00000564061 EDC3Q96F86 508 aaKnown RBP14.66□□□□□ -0.06
POLR3E-208ENST00000564061 USP44Q9H0E7 712 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 MAP3K5Q99683 1374 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 EDC4Q6P2E9 1401 aaKnown RBP14.66□□□□□ -0.06
POLR3E-208ENST00000564061 LINS1Q8NG48 757 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 UBAC1Q9BSL1 405 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 RAI14Q9P0K7 980 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 POGZQ7Z3K3 1410 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 PDIA4P13667 645 aaKnown RBP14.66□□□□□ -0.06
POLR3E-208ENST00000564061 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
POLR3E-208ENST00000564061 FILIP1LQ4L180 1135 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 BICDL1Q6ZP65 573 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 PPFIBP1Q86W92 1011 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 CPLX3Q8WVH0 158 aa14.66□□□□□ -0.06
POLR3E-208ENST00000564061 SLC3A2P08195 630 aaKnown RBP14.65□□□□□ -0.06
POLR3E-208ENST00000564061 APOBRQ0VD83 1088 aa14.65□□□□□ -0.06
POLR3E-208ENST00000564061 RUFY3Q7L099 469 aa14.65□□□□□ -0.06
POLR3E-208ENST00000564061 KIF18AQ8NI77 898 aa14.65□□□□□ -0.06
POLR3E-208ENST00000564061 UBXN4Q92575 508 aa14.65□□□□□ -0.06
POLR3E-208ENST00000564061 CCDC47Q96A33 483 aaKnown RBP14.65□□□□□ -0.06
POLR3E-208ENST00000564061 TRPM2O94759 1503 aa14.65□□□□□ -0.06
POLR3E-208ENST00000564061 TFCP2Q12800 502 aa14.65□□□□□ -0.06
POLR3E-208ENST00000564061 HSP90B2PQ58FF3 399 aa14.65□□□□□ -0.06
POLR3E-208ENST00000564061 HMGB1P09429 215 aaKnown RBP14.65□□□□□ -0.06
POLR3E-208ENST00000564061 AKAP4Q5JQC9 854 aa14.65□□□□□ -0.06
POLR3E-208ENST00000564061 CDKL5O76039 1030 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 CCDC171Q6TFL3 1326 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 MARCKSP29966 332 aaPredicted RBP14.64□□□□□ -0.07
POLR3E-208ENST00000564061 IFNL2Q8IZJ0 200 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 CAGE1Q8TC20 777 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 KLF18A0A0U1RQI7 1052 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 SNRPA1P09661 255 aaKnown RBP14.64□□□□□ -0.07
POLR3E-208ENST00000564061 STX1AQ16623 288 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 ZSCAN25Q6NSZ9 544 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 LDHAL6AQ6ZMR3 332 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 NAPBQ9H115 298 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 SMTNL1A8MU46 457 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 IL17REQ8NFR9 667 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 HMG20BQ9P0W2 317 aa14.64□□□□□ -0.07
POLR3E-208ENST00000564061 BRD1O95696 1058 aa14.63□□□□□ -0.07
POLR3E-208ENST00000564061 CCDC70Q6NSX1 233 aa14.63□□□□□ -0.07
POLR3E-208ENST00000564061 TMX4Q9H1E5 349 aaPredicted RBP14.63□□□□□ -0.07
POLR3E-208ENST00000564061 TTC41PQ6P2S7 1318 aa14.63□□□□□ -0.07
POLR3E-208ENST00000564061 TIMM10P62072 90 aa14.63□□□□□ -0.07
POLR3E-208ENST00000564061 MCMDC2Q4G0Z9 681 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms