RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ZNF521Q96K83 1311 aa36.49■■■■□ 3.43
NME3-203ENST00000563367 PRPF40BQ6NWY9 871 aaKnown RBP36.48■■■■□ 3.43
NME3-203ENST00000563367 CHMP4AQ9BY43 222 aa36.48■■■■□ 3.43
NME3-203ENST00000563367 RIC1Q4ADV7 1423 aa36.48■■■■□ 3.43
NME3-203ENST00000563367 FER1L6Q2WGJ9 1857 aa36.48■■■■□ 3.43
NME3-203ENST00000563367 C21orf2O43822 256 aa36.47■■■■□ 3.43
NME3-203ENST00000563367 RASSF7Q02833 373 aa36.46■■■■□ 3.43
NME3-203ENST00000563367 CRY2Q49AN0 593 aa36.46■■■■□ 3.43
NME3-203ENST00000563367 DIEXFQ68CQ4 756 aaKnown RBP36.46■■■■□ 3.43
NME3-203ENST00000563367 ZNF428Q96B54 188 aa36.46■■■■□ 3.43
NME3-203ENST00000563367 EXOSC9Q06265 439 aaKnown RBP36.45■■■■□ 3.43
NME3-203ENST00000563367 GOLGA2Q08379 1002 aa36.45■■■■□ 3.43
NME3-203ENST00000563367 ISCA1Q9BUE6 129 aa36.45■■■■□ 3.43
NME3-203ENST00000563367 CACNA1FO60840 1977 aa36.45■■■■□ 3.43
NME3-203ENST00000563367 LAMB2P55268 1798 aa36.45■■■■□ 3.43
NME3-203ENST00000563367 ATP5J2-PTCD1G3V325 749 aa36.44■■■■□ 3.42
NME3-203ENST00000563367 C9orf131Q5VYM1 1079 aa36.44■■■■□ 3.42
NME3-203ENST00000563367 C3orf67Q6ZVT6 689 aa36.44■■■■□ 3.42
NME3-203ENST00000563367 RIC3Q7Z5B4 369 aa36.44■■■■□ 3.42
NME3-203ENST00000563367 SLC10A5Q5PT55 438 aa36.43■■■■□ 3.42
NME3-203ENST00000563367 SYNE4Q8N205 404 aa36.43■■■■□ 3.42
NME3-203ENST00000563367 VAMP4O75379 141 aa36.42■■■■□ 3.42
NME3-203ENST00000563367 STK31Q9BXU1 1019 aa36.42■■■■□ 3.42
NME3-203ENST00000563367 NFKBIEO00221 500 aa36.41■■■■□ 3.42
NME3-203ENST00000563367 PRELPP51888 382 aa36.41■■■■□ 3.42
NME3-203ENST00000563367 MYH16Q9H6N6 1097 aa36.41■■■■□ 3.42
NME3-203ENST00000563367 TRMT112Q9UI30 125 aaKnown RBP36.41■■■■□ 3.42
NME3-203ENST00000563367 RNF123Q5XPI4 1314 aa36.4■■■■□ 3.42
NME3-203ENST00000563367 C7orf43Q8WVR3 580 aa36.4■■■■□ 3.42
NME3-203ENST00000563367 G2E3Q7L622 706 aa36.39■■■■□ 3.42
NME3-203ENST00000563367 MIER1Q8N108 512 aa36.39■■■■□ 3.42
NME3-203ENST00000563367 RNF181Q9P0P0 153 aa36.39■■■■□ 3.42
NME3-203ENST00000563367 DDX60Q8IY21 1712 aaKnown RBP36.38■■■■□ 3.41
NME3-203ENST00000563367 ZNF526Q8TF50 670 aaPredicted RBP36.38■■■■□ 3.41
NME3-203ENST00000563367 SLC4A2P04920 1241 aa36.37■■■■□ 3.41
NME3-203ENST00000563367 HCLS1P14317 486 aaPredicted RBP36.37■■■■□ 3.41
NME3-203ENST00000563367 HOXA10P31260 410 aaPredicted RBP36.37■■■■□ 3.41
NME3-203ENST00000563367 NLRP3Q96P20 1036 aa36.37■■■■□ 3.41
NME3-203ENST00000563367 SH3TC1Q8TE82 1336 aa36.36■■■■□ 3.41
NME3-203ENST00000563367 ALDH1B1P30837 517 aa36.36■■■■□ 3.41
NME3-203ENST00000563367 TRIM28Q13263 835 aaKnown RBP36.36■■■■□ 3.41
NME3-203ENST00000563367 RPGRQ92834 1020 aaKnown RBP36.36■■■■□ 3.41
NME3-203ENST00000563367 DDX58O95786 925 aaKnown RBP36.35■■■■□ 3.41
NME3-203ENST00000563367 MYD88Q99836 296 aa36.35■■■■□ 3.41
NME3-203ENST00000563367 DICER1Q9UPY3 1922 aaKnown RBP36.34■■■■□ 3.41
NME3-203ENST00000563367 OLFM4Q6UX06 510 aa36.34■■■■□ 3.41
NME3-203ENST00000563367 LMNB1P20700 586 aa36.33■■■■□ 3.41
NME3-203ENST00000563367 FAM89AQ96GI7 184 aa36.33■■■■□ 3.41
NME3-203ENST00000563367 METTL22Q9BUU2 404 aaPredicted RBP36.33■■■■□ 3.41
NME3-203ENST00000563367 MAP3K2Q9Y2U5 619 aa36.33■■■■□ 3.41
NME3-203ENST00000563367 PI4KAP2A4QPH2 592 aa36.32■■■■□ 3.4
NME3-203ENST00000563367 SOGA3Q5TF21 947 aa36.32■■■■□ 3.4
NME3-203ENST00000563367 KSR2Q6VAB6 950 aa36.32■■■■□ 3.4
NME3-203ENST00000563367 PI4KAP1Q8N8J0 262 aa36.32■■■■□ 3.4
NME3-203ENST00000563367 TAF1P21675 1872 aa36.32■■■■□ 3.4
NME3-203ENST00000563367 RBM17Q96I25 401 aaKnown RBP36.31■■■■□ 3.4
NME3-203ENST00000563367 GPBP1L1Q9HC44 474 aaPredicted RBP36.31■■■■□ 3.4
NME3-203ENST00000563367 CRAMP1Q96RY5 1269 aa36.3■■■■□ 3.4
NME3-203ENST00000563367 TIAM2Q8IVF5 1701 aa36.3■■■■□ 3.4
NME3-203ENST00000563367 CCDC93Q567U6 631 aa36.29■■■■□ 3.4
NME3-203ENST00000563367 RTL5Q5HYW3 569 aaPredicted RBP36.29■■■■□ 3.4
NME3-203ENST00000563367 LTBP3Q9NS15 1303 aa36.29■■■■□ 3.4
NME3-203ENST00000563367 TAOK3Q9H2K8 898 aa36.28■■■■□ 3.4
NME3-203ENST00000563367 FLIIQ13045 1269 aa36.27■■■■□ 3.4
NME3-203ENST00000563367 SLC51AQ86UW1 340 aa36.26■■■■□ 3.4
NME3-203ENST00000563367 CCDC191Q8NCU4 936 aa36.26■■■■□ 3.4
NME3-203ENST00000563367 E9PSI1 815 aa36.25■■■■□ 3.39
NME3-203ENST00000563367 IGKV5-2P06315 115 aa36.24■■■■□ 3.39
NME3-203ENST00000563367 SLFN5Q08AF3 891 aa36.24■■■■□ 3.39
NME3-203ENST00000563367 ZBTB38Q8NAP3 1195 aaPredicted RBP36.24■■■■□ 3.39
NME3-203ENST00000563367 CDCA7LQ96GN5 454 aa36.24■■■■□ 3.39
NME3-203ENST00000563367 ABCC4O15439 1325 aa36.24■■■■□ 3.39
NME3-203ENST00000563367 SNED1Q8TER0 1413 aa36.24■■■■□ 3.39
NME3-203ENST00000563367 CWC25Q9NXE8 425 aaPredicted RBP36.23■■■■□ 3.39
NME3-203ENST00000563367 IRS4O14654 1257 aaPredicted RBP36.22■■■■□ 3.39
NME3-203ENST00000563367 JARID2Q92833 1246 aaPredicted RBP36.22■■■■□ 3.39
NME3-203ENST00000563367 PPEF1O14829 653 aaPredicted RBP36.21■■■■□ 3.39
NME3-203ENST00000563367 FKBP5Q13451 457 aaPredicted RBP36.21■■■■□ 3.39
NME3-203ENST00000563367 RTKN2Q8IZC4 609 aa36.21■■■■□ 3.39
NME3-203ENST00000563367 FKBP4Q02790 459 aaKnown RBP eCLIP36.2■■■■□ 3.39
NME3-203ENST00000563367 ZC3H4Q9UPT8 1303 aaKnown RBP36.19■■■■□ 3.38
NME3-203ENST00000563367 PCCAP05165 728 aaPredicted RBP36.19■■■■□ 3.38
NME3-203ENST00000563367 NEXNQ0ZGT2 675 aa36.18■■■■□ 3.38
NME3-203ENST00000563367 SF3B3Q15393 1217 aaKnown RBP36.18■■■■□ 3.38
NME3-203ENST00000563367 CWF19L2Q2TBE0 894 aaKnown RBP36.18■■■■□ 3.38
NME3-203ENST00000563367 DDX46Q7L014 1031 aaKnown RBP36.18■■■■□ 3.38
NME3-203ENST00000563367 CC2D2BQ6DHV5 1058 aa36.17■■■■□ 3.38
NME3-203ENST00000563367 ZNF277Q9NRM2 450 aaPredicted RBP36.17■■■■□ 3.38
NME3-203ENST00000563367 NEURL1BA8MQ27 555 aa36.16■■■■□ 3.38
NME3-203ENST00000563367 NMRK2Q9NPI5 230 aa36.16■■■■□ 3.38
NME3-203ENST00000563367 KIF3CO14782 793 aa36.15■■■■□ 3.38
NME3-203ENST00000563367 TRMT2AQ8IZ69 625 aaKnown RBP36.15■■■■□ 3.38
NME3-203ENST00000563367 DNAAF4Q8WXU2 420 aa36.15■■■■□ 3.38
NME3-203ENST00000563367 ATP6V0A2Q9Y487 856 aa36.15■■■■□ 3.38
NME3-203ENST00000563367 COL4A1P02462 1669 aa36.15■■■■□ 3.38
NME3-203ENST00000563367 BBOX1O75936 387 aa36.14■■■■□ 3.38
NME3-203ENST00000563367 GRAPQ13588 217 aa36.14■■■■□ 3.38
NME3-203ENST00000563367 GRAPLQ8TC17 118 aaPredicted RBP36.14■■■■□ 3.38
NME3-203ENST00000563367 MYH3P11055 1940 aa36.12■■■■□ 3.37
NME3-203ENST00000563367 PSMD1Q99460 953 aa36.12■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms