RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 LINS1Q8NG48 757 aa18.63■□□□□ 0.57
CDH11-207ENST00000563255 EXOC6Q8TAG9 804 aa18.63■□□□□ 0.57
CDH11-207ENST00000563255 SRCIN1Q9C0H9 1055 aa18.63■□□□□ 0.57
CDH11-207ENST00000563255 ZBTB3Q9H5J0 574 aa18.63■□□□□ 0.57
CDH11-207ENST00000563255 HSP90AB3PQ58FF7 597 aa18.62■□□□□ 0.57
CDH11-207ENST00000563255 TBC1D2BQ9UPU7 963 aa18.62■□□□□ 0.57
CDH11-207ENST00000563255 ZBTB7BO15156 539 aaPredicted RBP18.61■□□□□ 0.57
CDH11-207ENST00000563255 CAMTA2O94983 1202 aa18.61■□□□□ 0.57
CDH11-207ENST00000563255 MMP10P09238 476 aa18.61■□□□□ 0.57
CDH11-207ENST00000563255 TCIRG1Q13488 830 aa18.61■□□□□ 0.57
CDH11-207ENST00000563255 MYD88Q99836 296 aa18.61■□□□□ 0.57
CDH11-207ENST00000563255 NARFQ9UHQ1 456 aa18.61■□□□□ 0.57
CDH11-207ENST00000563255 CLEC4GQ6UXB4 293 aa18.6■□□□□ 0.57
CDH11-207ENST00000563255 ARHGEF1Q92888 912 aaKnown RBP18.6■□□□□ 0.57
CDH11-207ENST00000563255 IGKV5-2P06315 115 aa18.59■□□□□ 0.57
CDH11-207ENST00000563255 TRIM28Q13263 835 aaKnown RBP18.59■□□□□ 0.57
CDH11-207ENST00000563255 HLFQ16534 295 aa18.59■□□□□ 0.57
CDH11-207ENST00000563255 NLGN1Q8N2Q7 840 aa18.59■□□□□ 0.57
CDH11-207ENST00000563255 ISCA1Q9BUE6 129 aa18.59■□□□□ 0.57
CDH11-207ENST00000563255 MYH3P11055 1940 aa18.59■□□□□ 0.57
CDH11-207ENST00000563255 NEURL1BA8MQ27 555 aa18.58■□□□□ 0.56
CDH11-207ENST00000563255 ZNF652Q9Y2D9 606 aa18.58■□□□□ 0.56
CDH11-207ENST00000563255 GTF3C3Q9Y5Q9 886 aa18.58■□□□□ 0.56
CDH11-207ENST00000563255 USP42Q9H9J4 1324 aaKnown RBP18.57■□□□□ 0.56
CDH11-207ENST00000563255 ZPR1O75312 459 aa18.57■□□□□ 0.56
CDH11-207ENST00000563255 HSPA6P17066 643 aa18.57■□□□□ 0.56
CDH11-207ENST00000563255 RFC4P35249 363 aa18.57■□□□□ 0.56
CDH11-207ENST00000563255 CWF19L2Q2TBE0 894 aaKnown RBP18.57■□□□□ 0.56
CDH11-207ENST00000563255 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
CDH11-207ENST00000563255 ZBTB40Q9NUA8 1239 aa18.57■□□□□ 0.56
CDH11-207ENST00000563255 UTYO14607 1347 aa18.56■□□□□ 0.56
CDH11-207ENST00000563255 GNAI3P08754 354 aa18.56■□□□□ 0.56
CDH11-207ENST00000563255 GCKRQ14397 625 aa18.56■□□□□ 0.56
CDH11-207ENST00000563255 ZNF34Q8IZ26 560 aa18.56■□□□□ 0.56
CDH11-207ENST00000563255 USP44Q9H0E7 712 aa18.56■□□□□ 0.56
CDH11-207ENST00000563255 LAMB2P55268 1798 aa18.55■□□□□ 0.56
CDH11-207ENST00000563255 A0A0G2JLW4 131 aa18.55■□□□□ 0.56
CDH11-207ENST00000563255 ATP5J2-PTCD1G3V325 749 aa18.55■□□□□ 0.56
CDH11-207ENST00000563255 USPL1Q5W0Q7 1092 aa18.55■□□□□ 0.56
CDH11-207ENST00000563255 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
CDH11-207ENST00000563255 CWC25Q9NXE8 425 aaPredicted RBP18.55■□□□□ 0.56
CDH11-207ENST00000563255 TGFB2P61812 414 aa18.54■□□□□ 0.56
CDH11-207ENST00000563255 MEIS3Q99687 375 aa18.54■□□□□ 0.56
CDH11-207ENST00000563255 BCS1LQ9Y276 419 aa18.54■□□□□ 0.56
CDH11-207ENST00000563255 GRM8O00222 908 aa18.53■□□□□ 0.56
CDH11-207ENST00000563255 GYS1P13807 737 aa18.53■□□□□ 0.56
CDH11-207ENST00000563255 C9orf78Q9NZ63 289 aaPredicted RBP18.53■□□□□ 0.56
CDH11-207ENST00000563255 SRP68Q9UHB9 627 aaKnown RBP18.53■□□□□ 0.56
CDH11-207ENST00000563255 HDAC5Q9UQL6 1122 aa18.53■□□□□ 0.56
CDH11-207ENST00000563255 PARP3Q9Y6F1 533 aa18.53■□□□□ 0.56
CDH11-207ENST00000563255 PARP10Q53GL7 1025 aa18.52■□□□□ 0.56
CDH11-207ENST00000563255 NLRP10Q86W26 655 aa18.52■□□□□ 0.56
CDH11-207ENST00000563255 PPP4R2Q9NY27 417 aa18.52■□□□□ 0.56
CDH11-207ENST00000563255 DDX60Q8IY21 1712 aaKnown RBP18.52■□□□□ 0.55
CDH11-207ENST00000563255 H7C1W4 665 aa18.51■□□□□ 0.55
CDH11-207ENST00000563255 NBPF7P0C2Y1 421 aaPredicted RBP18.51■□□□□ 0.55
CDH11-207ENST00000563255 UBTFL1P0CB47 393 aaPredicted RBP18.51■□□□□ 0.55
CDH11-207ENST00000563255 DPEP1P16444 411 aa18.51■□□□□ 0.55
CDH11-207ENST00000563255 UBN2Q6ZU65 1347 aa18.5■□□□□ 0.55
CDH11-207ENST00000563255 GNAI2P04899 355 aa18.5■□□□□ 0.55
CDH11-207ENST00000563255 GPTP24298 496 aa18.5■□□□□ 0.55
CDH11-207ENST00000563255 ARHGAP27Q6ZUM4 889 aa18.5■□□□□ 0.55
CDH11-207ENST00000563255 NIP7Q9Y221 180 aaKnown RBP eCLIP18.5■□□□□ 0.55
CDH11-207ENST00000563255 PCCAP05165 728 aaPredicted RBP18.49■□□□□ 0.55
CDH11-207ENST00000563255 CASP7P55210 303 aa18.49■□□□□ 0.55
CDH11-207ENST00000563255 TBC1D9BQ66K14 1250 aa18.49■□□□□ 0.55
CDH11-207ENST00000563255 PPP1R42Q7Z4L9 355 aa18.49■□□□□ 0.55
CDH11-207ENST00000563255 ZBTB38Q8NAP3 1195 aaPredicted RBP18.49■□□□□ 0.55
CDH11-207ENST00000563255 NRXN2Q9P2S2 1712 aa18.49■□□□□ 0.55
CDH11-207ENST00000563255 KIF3CO14782 793 aa18.48■□□□□ 0.55
CDH11-207ENST00000563255 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
CDH11-207ENST00000563255 CDHR2Q9BYE9 1310 aa18.48■□□□□ 0.55
CDH11-207ENST00000563255 SUSD4Q5VX71 490 aa18.47■□□□□ 0.55
CDH11-207ENST00000563255 RPAP2Q8IXW5 612 aaPredicted RBP18.47■□□□□ 0.55
CDH11-207ENST00000563255 PCDHB15Q9Y5E8 787 aa18.47■□□□□ 0.55
CDH11-207ENST00000563255 C10orf71Q711Q0 1435 aa18.47■□□□□ 0.55
CDH11-207ENST00000563255 TM4SF1P30408 202 aa18.46■□□□□ 0.55
CDH11-207ENST00000563255 UBE3BQ7Z3V4 1068 aa18.46■□□□□ 0.55
CDH11-207ENST00000563255 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
CDH11-207ENST00000563255 C1orf115Q9H7X2 142 aa18.46■□□□□ 0.55
CDH11-207ENST00000563255 TRMT112Q9UI30 125 aaKnown RBP18.46■□□□□ 0.55
CDH11-207ENST00000563255 LRRFIP2Q9Y608 721 aaKnown RBP18.46■□□□□ 0.55
CDH11-207ENST00000563255 CARMIL3Q8ND23 1372 aa18.45■□□□□ 0.54
CDH11-207ENST00000563255 KAZALD1Q96I82 304 aa18.45■□□□□ 0.54
CDH11-207ENST00000563255 SUCLG2Q96I99 432 aa18.45■□□□□ 0.54
CDH11-207ENST00000563255 NYXQ9GZU5 481 aa18.45■□□□□ 0.54
CDH11-207ENST00000563255 NTSR2O95665 410 aa18.44■□□□□ 0.54
CDH11-207ENST00000563255 ATP8B2P98198 1209 aa18.44■□□□□ 0.54
CDH11-207ENST00000563255 NFIXQ14938 502 aa18.44■□□□□ 0.54
CDH11-207ENST00000563255 CEP85Q6P2H3 762 aa18.44■□□□□ 0.54
CDH11-207ENST00000563255 BICDL1Q6ZP65 573 aa18.44■□□□□ 0.54
CDH11-207ENST00000563255 ANKRD44Q8N8A2 993 aa18.44■□□□□ 0.54
CDH11-207ENST00000563255 CCDC136Q96JN2 1154 aa18.44■□□□□ 0.54
CDH11-207ENST00000563255 PLA2G12BQ9BX93 195 aa18.44■□□□□ 0.54
CDH11-207ENST00000563255 PIM2Q9P1W9 311 aa18.44■□□□□ 0.54
CDH11-207ENST00000563255 SH3TC1Q8TE82 1336 aa18.44■□□□□ 0.54
CDH11-207ENST00000563255 KIAA1551Q9HCM1 1747 aa18.43■□□□□ 0.54
CDH11-207ENST00000563255 KCNA3P22001 575 aa18.43■□□□□ 0.54
CDH11-207ENST00000563255 MTX1Q13505 466 aa18.43■□□□□ 0.54
CDH11-207ENST00000563255 FAM89AQ96GI7 184 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms