RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 GJA3Q9Y6H8 435 aa9.86□□□□□ -0.83
LINC00557-201ENST00000563184 ERBB4Q15303 1308 aa9.85□□□□□ -0.83
LINC00557-201ENST00000563184 IGHA2P01877 340 aa9.85□□□□□ -0.83
LINC00557-201ENST00000563184 GMPRP36959 345 aa9.85□□□□□ -0.83
LINC00557-201ENST00000563184 ARSDP51689 593 aa9.85□□□□□ -0.83
LINC00557-201ENST00000563184 DNM1Q05193 864 aaKnown RBP9.85□□□□□ -0.83
LINC00557-201ENST00000563184 ZNF837Q96EG3 531 aaPredicted RBP9.85□□□□□ -0.83
LINC00557-201ENST00000563184 CEP63Q96MT8 703 aa9.85□□□□□ -0.83
LINC00557-201ENST00000563184 ASB16Q96NS5 453 aa9.85□□□□□ -0.83
LINC00557-201ENST00000563184 NDUFB5O43674 189 aa9.84□□□□□ -0.83
LINC00557-201ENST00000563184 NDFIP2Q9NV92 336 aa9.84□□□□□ -0.83
LINC00557-201ENST00000563184 STK17AQ9UEE5 414 aa9.84□□□□□ -0.83
LINC00557-201ENST00000563184 EFSO43281 561 aa9.83□□□□□ -0.84
LINC00557-201ENST00000563184 FAM157BP0CG42 384 aa9.83□□□□□ -0.84
LINC00557-201ENST00000563184 TMC7Q7Z402 723 aa9.83□□□□□ -0.84
LINC00557-201ENST00000563184 RGL4Q8IZJ4 473 aa9.83□□□□□ -0.84
LINC00557-201ENST00000563184 GJD3Q8N144 294 aa9.83□□□□□ -0.84
LINC00557-201ENST00000563184 NUDT16Q96DE0 195 aaKnown RBP9.83□□□□□ -0.84
LINC00557-201ENST00000563184 FAM129BQ96TA1 746 aa9.83□□□□□ -0.84
LINC00557-201ENST00000563184 GGNBP2Q9H3C7 697 aa9.83□□□□□ -0.84
LINC00557-201ENST00000563184 ANKRD33BA6NCL7 494 aa9.82□□□□□ -0.84
LINC00557-201ENST00000563184 H7C1W4 665 aa9.82□□□□□ -0.84
LINC00557-201ENST00000563184 ATXN7O15265 892 aaPredicted RBP9.82□□□□□ -0.84
LINC00557-201ENST00000563184 TRIP4Q15650 581 aaPredicted RBP9.82□□□□□ -0.84
LINC00557-201ENST00000563184 FIGNL1Q6PIW4 674 aa9.82□□□□□ -0.84
LINC00557-201ENST00000563184 NPAS4Q8IUM7 802 aa9.82□□□□□ -0.84
LINC00557-201ENST00000563184 FOXD4L4Q8WXT5 416 aaPredicted RBP9.82□□□□□ -0.84
LINC00557-201ENST00000563184 CITED4Q96RK1 184 aa9.82□□□□□ -0.84
LINC00557-201ENST00000563184 RTCBQ9Y3I0 505 aaKnown RBP9.82□□□□□ -0.84
LINC00557-201ENST00000563184 PCDHGC4Q9Y5F7 938 aa9.82□□□□□ -0.84
LINC00557-201ENST00000563184 KCNMB2Q9Y691 235 aa9.82□□□□□ -0.84
LINC00557-201ENST00000563184 BNIP3LO60238 219 aa9.81□□□□□ -0.84
LINC00557-201ENST00000563184 NANOS1Q8WY41 292 aaKnown RBP9.81□□□□□ -0.84
LINC00557-201ENST00000563184 PIK3R5Q8WYR1 880 aa9.81□□□□□ -0.84
LINC00557-201ENST00000563184 GMCL1Q96IK5 515 aa9.81□□□□□ -0.84
LINC00557-201ENST00000563184 BRD7Q9NPI1 651 aa9.81□□□□□ -0.84
LINC00557-201ENST00000563184 FAM13BQ9NYF5 915 aa9.81□□□□□ -0.84
LINC00557-201ENST00000563184 DCDC2BA2VCK2 349 aa9.8□□□□□ -0.84
LINC00557-201ENST00000563184 GPR182O15218 404 aa9.8□□□□□ -0.84
LINC00557-201ENST00000563184 TNP2Q05952 138 aa9.8□□□□□ -0.84
LINC00557-201ENST00000563184 SFSWAPQ12872 951 aaKnown RBP9.8□□□□□ -0.84
LINC00557-201ENST00000563184 GTPBP3Q969Y2 492 aaKnown RBP9.8□□□□□ -0.84
LINC00557-201ENST00000563184 STRN4Q9NRL3 753 aa9.8□□□□□ -0.84
LINC00557-201ENST00000563184 A6NHS1 94 aa9.79□□□□□ -0.84
LINC00557-201ENST00000563184 ERCC3P19447 782 aa9.79□□□□□ -0.84
LINC00557-201ENST00000563184 KCNQ4P56696 695 aa9.79□□□□□ -0.84
LINC00557-201ENST00000563184 ZSCAN29Q8IWY8 852 aaPredicted RBP9.79□□□□□ -0.84
LINC00557-201ENST00000563184 CMTR1Q8N1G2 835 aaKnown RBP9.79□□□□□ -0.84
LINC00557-201ENST00000563184 ABHD17AQ96GS6 310 aa9.79□□□□□ -0.84
LINC00557-201ENST00000563184 KHNYNO15037 678 aaKnown RBP9.78□□□□□ -0.84
LINC00557-201ENST00000563184 TREHO43280 583 aa9.78□□□□□ -0.84
LINC00557-201ENST00000563184 MAPTP10636 758 aaKnown RBP9.78□□□□□ -0.84
LINC00557-201ENST00000563184 USP5P45974 858 aa9.78□□□□□ -0.84
LINC00557-201ENST00000563184 DSC3Q14574 896 aa9.78□□□□□ -0.84
LINC00557-201ENST00000563184 GRIN2CQ14957 1233 aa9.78□□□□□ -0.84
LINC00557-201ENST00000563184 VWA5B2Q8N398 1253 aa9.78□□□□□ -0.84
LINC00557-201ENST00000563184 PDE3BQ13370 1112 aa9.77□□□□□ -0.85
LINC00557-201ENST00000563184 KCNH4Q9UQ05 1017 aa9.77□□□□□ -0.85
LINC00557-201ENST00000563184 CDC14CA4D256 554 aa9.76□□□□□ -0.85
LINC00557-201ENST00000563184 FAM181BA6NEQ2 426 aa9.76□□□□□ -0.85
LINC00557-201ENST00000563184 EPB42P16452 691 aa9.76□□□□□ -0.85
LINC00557-201ENST00000563184 PCSK2P16519 638 aa9.76□□□□□ -0.85
LINC00557-201ENST00000563184 C8orf34Q49A92 452 aa9.76□□□□□ -0.85
LINC00557-201ENST00000563184 TMC1Q8TDI8 760 aa9.76□□□□□ -0.85
LINC00557-201ENST00000563184 DMRTB1Q96MA1 342 aa9.76□□□□□ -0.85
LINC00557-201ENST00000563184 GPR25O00155 361 aa9.75□□□□□ -0.85
LINC00557-201ENST00000563184 EGFRP00533 1210 aa9.75□□□□□ -0.85
LINC00557-201ENST00000563184 FMR1Q06787 632 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC00557-201ENST00000563184 LAMC2Q13753 1193 aa9.75□□□□□ -0.85
LINC00557-201ENST00000563184 ZSCAN1Q8NBB4 408 aa9.75□□□□□ -0.85
LINC00557-201ENST00000563184 ALKBH8Q96BT7 664 aaKnown RBP9.75□□□□□ -0.85
LINC00557-201ENST00000563184 ATXN7L1Q9ULK2 861 aaPredicted RBP9.75□□□□□ -0.85
LINC00557-201ENST00000563184 UBAP1LF5GYI3 381 aa9.74□□□□□ -0.85
LINC00557-201ENST00000563184 XYLBO75191 536 aa9.74□□□□□ -0.85
LINC00557-201ENST00000563184 RPLP1P05386 114 aaKnown RBP9.74□□□□□ -0.85
LINC00557-201ENST00000563184 CD33P20138 364 aa9.74□□□□□ -0.85
LINC00557-201ENST00000563184 XKR5Q6UX68 686 aa9.74□□□□□ -0.85
LINC00557-201ENST00000563184 FBXO33Q7Z6M2 555 aa9.74□□□□□ -0.85
LINC00557-201ENST00000563184 NIF3L1Q9GZT8 377 aa9.74□□□□□ -0.85
LINC00557-201ENST00000563184 C11orf16Q9NQ32 467 aa9.74□□□□□ -0.85
LINC00557-201ENST00000563184 P4HBP07237 508 aaKnown RBP9.73□□□□□ -0.85
LINC00557-201ENST00000563184 LORP23490 312 aaPredicted RBP9.73□□□□□ -0.85
LINC00557-201ENST00000563184 EHHADHQ08426 723 aa9.73□□□□□ -0.85
LINC00557-201ENST00000563184 SV2AQ7L0J3 742 aa9.73□□□□□ -0.85
LINC00557-201ENST00000563184 CFHR5Q9BXR6 569 aa9.73□□□□□ -0.85
LINC00557-201ENST00000563184 MARK1Q9P0L2 795 aa9.73□□□□□ -0.85
LINC00557-201ENST00000563184 FGFR3P22607 806 aa9.72□□□□□ -0.85
LINC00557-201ENST00000563184 COL19A1Q14993 1142 aa9.72□□□□□ -0.85
LINC00557-201ENST00000563184 GPR161Q8N6U8 529 aaKnown RBP9.72□□□□□ -0.85
LINC00557-201ENST00000563184 SLC30A3Q99726 388 aa9.72□□□□□ -0.85
LINC00557-201ENST00000563184 GSX2Q9BZM3 304 aa9.72□□□□□ -0.85
LINC00557-201ENST00000563184 TMEM63CQ9P1W3 806 aa9.72□□□□□ -0.85
LINC00557-201ENST00000563184 FNDC3AQ9Y2H6 1198 aaKnown RBP9.72□□□□□ -0.85
LINC00557-201ENST00000563184 AMOTL2Q9Y2J4 779 aa9.72□□□□□ -0.85
LINC00557-201ENST00000563184 CTBSQ01459 385 aa9.71□□□□□ -0.86
LINC00557-201ENST00000563184 PLCB3Q01970 1234 aa9.71□□□□□ -0.86
LINC00557-201ENST00000563184 TAGLNQ01995 201 aaKnown RBP9.71□□□□□ -0.86
LINC00557-201ENST00000563184 ORC1Q13415 861 aa9.71□□□□□ -0.86
LINC00557-201ENST00000563184 PDE12Q6L8Q7 609 aaKnown RBP9.71□□□□□ -0.86
LINC00557-201ENST00000563184 ELP3Q9H9T3 547 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms