RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 IBTKQ9P2D0 1353 aaPredicted RBP21.9■■□□□ 1.1
IRF8-203ENST00000563180 KCNA3P22001 575 aa21.89■■□□□ 1.1
IRF8-203ENST00000563180 TRIM28Q13263 835 aaKnown RBP21.89■■□□□ 1.1
IRF8-203ENST00000563180 ALDH1L2Q3SY69 923 aa21.89■■□□□ 1.1
IRF8-203ENST00000563180 H0YIN7 160 aa21.88■■□□□ 1.09
IRF8-203ENST00000563180 GPR162Q16538 588 aa21.88■■□□□ 1.09
IRF8-203ENST00000563180 TRMT112Q9UI30 125 aaKnown RBP21.88■■□□□ 1.09
IRF8-203ENST00000563180 NEXNQ0ZGT2 675 aa21.87■■□□□ 1.09
IRF8-203ENST00000563180 DNAAF4Q8WXU2 420 aa21.87■■□□□ 1.09
IRF8-203ENST00000563180 SMC4Q9NTJ3 1288 aa21.87■■□□□ 1.09
IRF8-203ENST00000563180 ABCC12Q96J65 1359 aa21.87■■□□□ 1.09
IRF8-203ENST00000563180 PIM2Q9P1W9 311 aa21.87■■□□□ 1.09
IRF8-203ENST00000563180 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
IRF8-203ENST00000563180 BRCA1P38398 1863 aaKnown RBP21.86■■□□□ 1.09
IRF8-203ENST00000563180 COL11A2P13942 1736 aaPredicted RBP21.86■■□□□ 1.09
IRF8-203ENST00000563180 F6X3S4 739 aa21.86■■□□□ 1.09
IRF8-203ENST00000563180 SYNE4Q8N205 404 aa21.86■■□□□ 1.09
IRF8-203ENST00000563180 DLEC1Q9Y238 1755 aa21.85■■□□□ 1.09
IRF8-203ENST00000563180 RNF123Q5XPI4 1314 aa21.85■■□□□ 1.09
IRF8-203ENST00000563180 IGKV5-2P06315 115 aa21.85■■□□□ 1.09
IRF8-203ENST00000563180 YBX3P16989 372 aaKnown RBP eCLIP21.85■■□□□ 1.09
IRF8-203ENST00000563180 RARSP54136 660 aaKnown RBP21.85■■□□□ 1.09
IRF8-203ENST00000563180 CCDC191Q8NCU4 936 aa21.85■■□□□ 1.09
IRF8-203ENST00000563180 ZNF622Q969S3 477 aaKnown RBP eCLIP21.85■■□□□ 1.09
IRF8-203ENST00000563180 CWC25Q9NXE8 425 aaPredicted RBP21.85■■□□□ 1.09
IRF8-203ENST00000563180 TNRC6CQ9HCJ0 1690 aaKnown RBP21.85■■□□□ 1.09
IRF8-203ENST00000563180 SH3TC1Q8TE82 1336 aa21.84■■□□□ 1.09
IRF8-203ENST00000563180 SLC10A5Q5PT55 438 aa21.84■■□□□ 1.09
IRF8-203ENST00000563180 FAM89AQ96GI7 184 aa21.84■■□□□ 1.09
IRF8-203ENST00000563180 YTHDC1Q96MU7 727 aaKnown RBP21.84■■□□□ 1.09
IRF8-203ENST00000563180 BCS1LQ9Y276 419 aa21.84■■□□□ 1.09
IRF8-203ENST00000563180 KLRG2A4D1S0 409 aaPredicted RBP21.83■■□□□ 1.08
IRF8-203ENST00000563180 SRGNP10124 158 aa21.83■■□□□ 1.08
IRF8-203ENST00000563180 HCLS1P14317 486 aaPredicted RBP21.83■■□□□ 1.08
IRF8-203ENST00000563180 CWF19L2Q2TBE0 894 aaKnown RBP21.83■■□□□ 1.08
IRF8-203ENST00000563180 RTL5Q5HYW3 569 aaPredicted RBP21.83■■□□□ 1.08
IRF8-203ENST00000563180 RIC1Q4ADV7 1423 aa21.82■■□□□ 1.08
IRF8-203ENST00000563180 NEURL1BA8MQ27 555 aa21.82■■□□□ 1.08
IRF8-203ENST00000563180 DALRD3Q5D0E6 543 aaKnown RBP21.82■■□□□ 1.08
IRF8-203ENST00000563180 PTPRCP08575 1304 aa21.82■■□□□ 1.08
IRF8-203ENST00000563180 STYK1Q6J9G0 422 aa21.81■■□□□ 1.08
IRF8-203ENST00000563180 TTLL6Q8N841 843 aa21.81■■□□□ 1.08
IRF8-203ENST00000563180 ZBTB38Q8NAP3 1195 aaPredicted RBP21.81■■□□□ 1.08
IRF8-203ENST00000563180 LINS1Q8NG48 757 aa21.81■■□□□ 1.08
IRF8-203ENST00000563180 JARID2Q92833 1246 aaPredicted RBP21.81■■□□□ 1.08
IRF8-203ENST00000563180 MASTLQ96GX5 879 aa21.81■■□□□ 1.08
IRF8-203ENST00000563180 NLRP3Q96P20 1036 aa21.81■■□□□ 1.08
IRF8-203ENST00000563180 PCCAP05165 728 aaPredicted RBP21.8■■□□□ 1.08
IRF8-203ENST00000563180 NPR1P16066 1061 aa21.8■■□□□ 1.08
IRF8-203ENST00000563180 SLC4A10Q6U841 1118 aa21.8■■□□□ 1.08
IRF8-203ENST00000563180 C3orf67Q6ZVT6 689 aa21.8■■□□□ 1.08
IRF8-203ENST00000563180 NOB1Q9ULX3 412 aaKnown RBP21.8■■□□□ 1.08
IRF8-203ENST00000563180 DDX60Q8IY21 1712 aaKnown RBP21.79■■□□□ 1.08
IRF8-203ENST00000563180 LAMB2P55268 1798 aa21.79■■□□□ 1.08
IRF8-203ENST00000563180 CACNA1SQ13698 1873 aa21.79■■□□□ 1.08
IRF8-203ENST00000563180 BRPF1P55201 1214 aaPredicted RBP21.79■■□□□ 1.08
IRF8-203ENST00000563180 BEND3Q5T5X7 828 aa21.79■■□□□ 1.08
IRF8-203ENST00000563180 IRS4O14654 1257 aaPredicted RBP21.78■■□□□ 1.08
IRF8-203ENST00000563180 GRIN3BO60391 1043 aa21.78■■□□□ 1.08
IRF8-203ENST00000563180 BCAR3O75815 825 aa21.78■■□□□ 1.08
IRF8-203ENST00000563180 CRY2Q49AN0 593 aa21.78■■□□□ 1.08
IRF8-203ENST00000563180 CNKSR1Q969H4 720 aa21.78■■□□□ 1.08
IRF8-203ENST00000563180 ARFGEF1Q9Y6D6 1849 aa21.78■■□□□ 1.08
IRF8-203ENST00000563180 GCKRQ14397 625 aa21.77■■□□□ 1.08
IRF8-203ENST00000563180 RPGRQ92834 1020 aaKnown RBP21.77■■□□□ 1.08
IRF8-203ENST00000563180 H7C1W4 665 aa21.75■■□□□ 1.07
IRF8-203ENST00000563180 SLX4Q8IY92 1834 aa21.75■■□□□ 1.07
IRF8-203ENST00000563180 RBM17Q96I25 401 aaKnown RBP21.75■■□□□ 1.07
IRF8-203ENST00000563180 SRCIN1Q9C0H9 1055 aa21.75■■□□□ 1.07
IRF8-203ENST00000563180 KIF16BQ96L93 1317 aa21.74■■□□□ 1.07
IRF8-203ENST00000563180 HSP90B1P14625 803 aaKnown RBP21.74■■□□□ 1.07
IRF8-203ENST00000563180 UBE3BQ7Z3V4 1068 aa21.74■■□□□ 1.07
IRF8-203ENST00000563180 ZNF219Q9P2Y4 722 aaPredicted RBP21.74■■□□□ 1.07
IRF8-203ENST00000563180 CDHR2Q9BYE9 1310 aa21.74■■□□□ 1.07
IRF8-203ENST00000563180 ALDH1L1O75891 902 aa21.74■■□□□ 1.07
IRF8-203ENST00000563180 ALDH1B1P30837 517 aa21.74■■□□□ 1.07
IRF8-203ENST00000563180 HOXA10P31260 410 aaPredicted RBP21.74■■□□□ 1.07
IRF8-203ENST00000563180 PRPF40BQ6NWY9 871 aaKnown RBP21.74■■□□□ 1.07
IRF8-203ENST00000563180 API5Q9BZZ5 524 aaKnown RBP21.74■■□□□ 1.07
IRF8-203ENST00000563180 PDE8AO60658 829 aa21.73■■□□□ 1.07
IRF8-203ENST00000563180 ARHGAP27Q6ZUM4 889 aa21.73■■□□□ 1.07
IRF8-203ENST00000563180 FRAT1Q92837 279 aaPredicted RBP21.73■■□□□ 1.07
IRF8-203ENST00000563180 CRAMP1Q96RY5 1269 aa21.73■■□□□ 1.07
IRF8-203ENST00000563180 IPO8O15397 1037 aaKnown RBP21.72■■□□□ 1.07
IRF8-203ENST00000563180 C21orf2O43822 256 aa21.72■■□□□ 1.07
IRF8-203ENST00000563180 SF3B3Q15393 1217 aaKnown RBP21.72■■□□□ 1.07
IRF8-203ENST00000563180 ARHGAP45Q92619 1136 aa21.72■■□□□ 1.07
IRF8-203ENST00000563180 DDX46Q7L014 1031 aaKnown RBP21.71■■□□□ 1.07
IRF8-203ENST00000563180 CASP7P55210 303 aa21.7■■□□□ 1.06
IRF8-203ENST00000563180 C9orf78Q9NZ63 289 aaPredicted RBP21.7■■□□□ 1.06
IRF8-203ENST00000563180 TAF1P21675 1872 aa21.7■■□□□ 1.06
IRF8-203ENST00000563180 GRM8O00222 908 aa21.69■■□□□ 1.06
IRF8-203ENST00000563180 MYH3P11055 1940 aa21.69■■□□□ 1.06
IRF8-203ENST00000563180 ABCC4O15439 1325 aa21.68■■□□□ 1.06
IRF8-203ENST00000563180 CHD4Q14839 1912 aa21.68■■□□□ 1.06
IRF8-203ENST00000563180 C7orf43Q8WVR3 580 aa21.68■■□□□ 1.06
IRF8-203ENST00000563180 CCDC85AQ96PX6 553 aaPredicted RBP21.68■■□□□ 1.06
IRF8-203ENST00000563180 CCT4P50991 539 aaKnown RBP21.67■■□□□ 1.06
IRF8-203ENST00000563180 CCDC152Q4G0S7 254 aa21.67■■□□□ 1.06
IRF8-203ENST00000563180 ZKSCAN2Q63HK3 967 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms