RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 SLC10A5Q5PT55 438 aa24.04■■□□□ 1.44
CDH11-206ENST00000562998 UTP14AQ9BVJ6 771 aaKnown RBP24.04■■□□□ 1.44
CDH11-206ENST00000562998 E9PSI1 815 aa24.03■■□□□ 1.44
CDH11-206ENST00000562998 TCERG1O14776 1098 aaKnown RBP24.03■■□□□ 1.44
CDH11-206ENST00000562998 TRMT2AQ8IZ69 625 aaKnown RBP24.03■■□□□ 1.44
CDH11-206ENST00000562998 MASTLQ96GX5 879 aa24.03■■□□□ 1.44
CDH11-206ENST00000562998 STK31Q9BXU1 1019 aa24.03■■□□□ 1.44
CDH11-206ENST00000562998 SLC4A2P04920 1241 aa24.02■■□□□ 1.44
CDH11-206ENST00000562998 GTF2E1P29083 439 aaPredicted RBP24.02■■□□□ 1.44
CDH11-206ENST00000562998 G2E3Q7L622 706 aa24.02■■□□□ 1.44
CDH11-206ENST00000562998 SLX4Q8IY92 1834 aa24.01■■□□□ 1.43
CDH11-206ENST00000562998 NPR1P16066 1061 aa24.01■■□□□ 1.43
CDH11-206ENST00000562998 RIC3Q7Z5B4 369 aa24.01■■□□□ 1.43
CDH11-206ENST00000562998 ZNF622Q969S3 477 aaKnown RBP eCLIP24.01■■□□□ 1.43
CDH11-206ENST00000562998 ADCY9O60503 1353 aa24.01■■□□□ 1.43
CDH11-206ENST00000562998 CNKSR1Q969H4 720 aa24■■□□□ 1.43
CDH11-206ENST00000562998 CDCA7LQ96GN5 454 aa24■■□□□ 1.43
CDH11-206ENST00000562998 ATP5J2-PTCD1G3V325 749 aa23.99■■□□□ 1.43
CDH11-206ENST00000562998 DDX58O95786 925 aaKnown RBP23.99■■□□□ 1.43
CDH11-206ENST00000562998 KSR2Q6VAB6 950 aa23.99■■□□□ 1.43
CDH11-206ENST00000562998 METTL22Q9BUU2 404 aaPredicted RBP23.99■■□□□ 1.43
CDH11-206ENST00000562998 HOXA10P31260 410 aaPredicted RBP23.98■■□□□ 1.43
CDH11-206ENST00000562998 ARHGAP27Q6ZUM4 889 aa23.98■■□□□ 1.43
CDH11-206ENST00000562998 C3orf67Q6ZVT6 689 aa23.98■■□□□ 1.43
CDH11-206ENST00000562998 SYNE4Q8N205 404 aa23.98■■□□□ 1.43
CDH11-206ENST00000562998 C7orf43Q8WVR3 580 aa23.98■■□□□ 1.43
CDH11-206ENST00000562998 PI4KAP2A4QPH2 592 aa23.97■■□□□ 1.43
CDH11-206ENST00000562998 FLIIQ13045 1269 aa23.97■■□□□ 1.43
CDH11-206ENST00000562998 PRPF40BQ6NWY9 871 aaKnown RBP23.97■■□□□ 1.43
CDH11-206ENST00000562998 PI4KAP1Q8N8J0 262 aa23.97■■□□□ 1.43
CDH11-206ENST00000562998 TRMT112Q9UI30 125 aaKnown RBP23.97■■□□□ 1.43
CDH11-206ENST00000562998 MAP3K2Q9Y2U5 619 aa23.97■■□□□ 1.43
CDH11-206ENST00000562998 CACNA1SQ13698 1873 aa23.96■■□□□ 1.43
CDH11-206ENST00000562998 SH3TC1Q8TE82 1336 aa23.96■■□□□ 1.43
CDH11-206ENST00000562998 LAMB2P55268 1798 aa23.96■■□□□ 1.43
CDH11-206ENST00000562998 DDX60Q8IY21 1712 aaKnown RBP23.96■■□□□ 1.43
CDH11-206ENST00000562998 MYD88Q99836 296 aa23.95■■□□□ 1.42
CDH11-206ENST00000562998 SBF1O95248 1867 aa23.95■■□□□ 1.42
CDH11-206ENST00000562998 FER1L6Q2WGJ9 1857 aa23.95■■□□□ 1.42
CDH11-206ENST00000562998 CCDC191Q8NCU4 936 aa23.94■■□□□ 1.42
CDH11-206ENST00000562998 C21orf2O43822 256 aa23.93■■□□□ 1.42
CDH11-206ENST00000562998 IGKV5-2P06315 115 aa23.93■■□□□ 1.42
CDH11-206ENST00000562998 ALDH1B1P30837 517 aa23.93■■□□□ 1.42
CDH11-206ENST00000562998 ZNF784Q8NCA9 323 aaPredicted RBP23.93■■□□□ 1.42
CDH11-206ENST00000562998 NLRP3Q96P20 1036 aa23.93■■□□□ 1.42
CDH11-206ENST00000562998 NFKBIEO00221 500 aa23.92■■□□□ 1.42
CDH11-206ENST00000562998 HCLS1P14317 486 aaPredicted RBP23.92■■□□□ 1.42
CDH11-206ENST00000562998 PRELPP51888 382 aa23.92■■□□□ 1.42
CDH11-206ENST00000562998 FAM89AQ96GI7 184 aa23.92■■□□□ 1.42
CDH11-206ENST00000562998 CRAMP1Q96RY5 1269 aa23.92■■□□□ 1.42
CDH11-206ENST00000562998 SNED1Q8TER0 1413 aa23.92■■□□□ 1.42
CDH11-206ENST00000562998 ZBTB38Q8NAP3 1195 aaPredicted RBP23.91■■□□□ 1.42
CDH11-206ENST00000562998 ZNF428Q96B54 188 aa23.91■■□□□ 1.42
CDH11-206ENST00000562998 CWC25Q9NXE8 425 aaPredicted RBP23.9■■□□□ 1.42
CDH11-206ENST00000562998 LTBP3Q9NS15 1303 aa23.89■■□□□ 1.42
CDH11-206ENST00000562998 PCCAP05165 728 aaPredicted RBP23.89■■□□□ 1.41
CDH11-206ENST00000562998 RASSF7Q02833 373 aa23.89■■□□□ 1.41
CDH11-206ENST00000562998 FKBP5Q13451 457 aaPredicted RBP23.89■■□□□ 1.41
CDH11-206ENST00000562998 SOGA3Q5TF21 947 aa23.89■■□□□ 1.41
CDH11-206ENST00000562998 RPGRQ92834 1020 aaKnown RBP23.89■■□□□ 1.41
CDH11-206ENST00000562998 NEURL1BA8MQ27 555 aa23.88■■□□□ 1.41
CDH11-206ENST00000562998 SF3B3Q15393 1217 aaKnown RBP23.88■■□□□ 1.41
CDH11-206ENST00000562998 DNAAF4Q8WXU2 420 aa23.88■■□□□ 1.41
CDH11-206ENST00000562998 RBM17Q96I25 401 aaKnown RBP23.88■■□□□ 1.41
CDH11-206ENST00000562998 CWF19L2Q2TBE0 894 aaKnown RBP23.87■■□□□ 1.41
CDH11-206ENST00000562998 C9orf131Q5VYM1 1079 aa23.87■■□□□ 1.41
CDH11-206ENST00000562998 MRPL50Q8N5N7 158 aaKnown RBP23.87■■□□□ 1.41
CDH11-206ENST00000562998 ZNF219Q9P2Y4 722 aaPredicted RBP23.87■■□□□ 1.41
CDH11-206ENST00000562998 IRS4O14654 1257 aaPredicted RBP23.86■■□□□ 1.41
CDH11-206ENST00000562998 CT47B1P0C2W7 299 aaPredicted RBP23.86■■□□□ 1.41
CDH11-206ENST00000562998 NEXNQ0ZGT2 675 aa23.86■■□□□ 1.41
CDH11-206ENST00000562998 ABCC4O15439 1325 aa23.85■■□□□ 1.41
CDH11-206ENST00000562998 CDHR2Q9BYE9 1310 aa23.85■■□□□ 1.41
CDH11-206ENST00000562998 LMNB1P20700 586 aa23.85■■□□□ 1.41
CDH11-206ENST00000562998 CCDC93Q567U6 631 aa23.85■■□□□ 1.41
CDH11-206ENST00000562998 RTL5Q5HYW3 569 aaPredicted RBP23.85■■□□□ 1.41
CDH11-206ENST00000562998 OLFM4Q6UX06 510 aa23.85■■□□□ 1.41
CDH11-206ENST00000562998 LINS1Q8NG48 757 aa23.85■■□□□ 1.41
CDH11-206ENST00000562998 SSH1Q8WYL5 1049 aa23.85■■□□□ 1.41
CDH11-206ENST00000562998 CCDC88AQ3V6T2 1871 aa23.84■■□□□ 1.41
CDH11-206ENST00000562998 HNRNPUQ00839 825 aaKnown RBP eCLIP23.84■■□□□ 1.41
CDH11-206ENST00000562998 F6X3S4 739 aa23.83■■□□□ 1.41
CDH11-206ENST00000562998 H7C1W4 665 aa23.83■■□□□ 1.41
CDH11-206ENST00000562998 ALDH1L2Q3SY69 923 aa23.83■■□□□ 1.41
CDH11-206ENST00000562998 BEND3Q5T5X7 828 aa23.83■■□□□ 1.41
CDH11-206ENST00000562998 CC2D2BQ6DHV5 1058 aa23.83■■□□□ 1.41
CDH11-206ENST00000562998 RNF181Q9P0P0 153 aa23.83■■□□□ 1.41
CDH11-206ENST00000562998 DICER1Q9UPY3 1922 aaKnown RBP23.82■■□□□ 1.4
CDH11-206ENST00000562998 TAF1P21675 1872 aa23.82■■□□□ 1.4
CDH11-206ENST00000562998 GCKRQ14397 625 aa23.82■■□□□ 1.4
CDH11-206ENST00000562998 TAOK3Q9H2K8 898 aa23.82■■□□□ 1.4
CDH11-206ENST00000562998 COL4A1P02462 1669 aa23.81■■□□□ 1.4
CDH11-206ENST00000562998 PPEF1O14829 653 aaPredicted RBP23.81■■□□□ 1.4
CDH11-206ENST00000562998 PDE8AO60658 829 aa23.81■■□□□ 1.4
CDH11-206ENST00000562998 BBOX1O75936 387 aa23.81■■□□□ 1.4
CDH11-206ENST00000562998 HSP90B1P14625 803 aaKnown RBP23.81■■□□□ 1.4
CDH11-206ENST00000562998 CASP7P55210 303 aa23.81■■□□□ 1.4
CDH11-206ENST00000562998 SLC51AQ86UW1 340 aa23.81■■□□□ 1.4
CDH11-206ENST00000562998 RTKN2Q8IZC4 609 aa23.81■■□□□ 1.4
CDH11-206ENST00000562998 JARID2Q92833 1246 aaPredicted RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms