RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 NBPF5PQ86XG9 351 aaPredicted RBP16.17■□□□□ 0.18
CDH11-204ENST00000562712 UTP14AQ9BVJ6 771 aaKnown RBP16.17■□□□□ 0.18
CDH11-204ENST00000562712 CWC25Q9NXE8 425 aaPredicted RBP16.17■□□□□ 0.18
CDH11-204ENST00000562712 BRCA1P38398 1863 aaKnown RBP16.16■□□□□ 0.18
CDH11-204ENST00000562712 ANKRD36CQ5JPF3 1778 aa16.16■□□□□ 0.18
CDH11-204ENST00000562712 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
CDH11-204ENST00000562712 TRIM27P14373 513 aa16.16■□□□□ 0.18
CDH11-204ENST00000562712 SRCIN1Q9C0H9 1055 aa16.16■□□□□ 0.18
CDH11-204ENST00000562712 CD2APQ9Y5K6 639 aa16.16■□□□□ 0.18
CDH11-204ENST00000562712 RNF123Q5XPI4 1314 aa16.16■□□□□ 0.18
CDH11-204ENST00000562712 N4BP2Q86UW6 1770 aaPredicted RBP16.15■□□□□ 0.18
CDH11-204ENST00000562712 IBTKQ9P2D0 1353 aaPredicted RBP16.15■□□□□ 0.18
CDH11-204ENST00000562712 ALDH1L1O75891 902 aa16.15■□□□□ 0.18
CDH11-204ENST00000562712 NTSR2O95665 410 aa16.15■□□□□ 0.18
CDH11-204ENST00000562712 CCT4P50991 539 aaKnown RBP16.15■□□□□ 0.18
CDH11-204ENST00000562712 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
CDH11-204ENST00000562712 C10orf71Q711Q0 1435 aa16.15■□□□□ 0.18
CDH11-204ENST00000562712 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.15■□□□□ 0.18
CDH11-204ENST00000562712 CNBD1Q8NA66 436 aa16.15■□□□□ 0.18
CDH11-204ENST00000562712 TRMT112Q9UI30 125 aaKnown RBP16.15■□□□□ 0.18
CDH11-204ENST00000562712 MS4A1P11836 297 aa16.14■□□□□ 0.17
CDH11-204ENST00000562712 GTF2E1P29083 439 aaPredicted RBP16.14■□□□□ 0.17
CDH11-204ENST00000562712 GCKRQ14397 625 aa16.14■□□□□ 0.17
CDH11-204ENST00000562712 SLC10A5Q5PT55 438 aa16.14■□□□□ 0.17
CDH11-204ENST00000562712 INTS3Q68E01 1043 aaKnown RBP16.14■□□□□ 0.17
CDH11-204ENST00000562712 PRR5LQ6MZQ0 368 aa16.14■□□□□ 0.17
CDH11-204ENST00000562712 ZBTB38Q8NAP3 1195 aaPredicted RBP16.14■□□□□ 0.17
CDH11-204ENST00000562712 ABCC4O15439 1325 aa16.14■□□□□ 0.17
CDH11-204ENST00000562712 NRXN2Q9P2S2 1712 aa16.14■□□□□ 0.17
CDH11-204ENST00000562712 FAM177BA6PVY3 158 aa16.13■□□□□ 0.17
CDH11-204ENST00000562712 NPHP1O15259 732 aa16.13■□□□□ 0.17
CDH11-204ENST00000562712 YBX3P16989 372 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDH11-204ENST00000562712 ST5P78524 1137 aa16.13■□□□□ 0.17
CDH11-204ENST00000562712 GPR162Q16538 588 aa16.13■□□□□ 0.17
CDH11-204ENST00000562712 DZIP1LQ8IYY4 767 aaKnown RBP16.13■□□□□ 0.17
CDH11-204ENST00000562712 BRIP1Q9BX63 1249 aa16.13■□□□□ 0.17
CDH11-204ENST00000562712 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
CDH11-204ENST00000562712 SH3TC1Q8TE82 1336 aa16.13■□□□□ 0.17
CDH11-204ENST00000562712 AFDNP55196 1824 aaKnown RBP16.12■□□□□ 0.17
CDH11-204ENST00000562712 H7C1W4 665 aa16.12■□□□□ 0.17
CDH11-204ENST00000562712 PCCAP05165 728 aaPredicted RBP16.12■□□□□ 0.17
CDH11-204ENST00000562712 ERFEQ4G0M1 354 aa16.12■□□□□ 0.17
CDH11-204ENST00000562712 FAM89AQ96GI7 184 aa16.12■□□□□ 0.17
CDH11-204ENST00000562712 PLIN1O60240 522 aa16.11■□□□□ 0.17
CDH11-204ENST00000562712 HSP90B1P14625 803 aaKnown RBP16.11■□□□□ 0.17
CDH11-204ENST00000562712 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
CDH11-204ENST00000562712 FTSJ3Q8IY81 847 aaKnown RBP16.11■□□□□ 0.17
CDH11-204ENST00000562712 CLUAP1Q96AJ1 413 aa16.11■□□□□ 0.17
CDH11-204ENST00000562712 PDE6BP35913 854 aa16.1■□□□□ 0.17
CDH11-204ENST00000562712 PDE3AQ14432 1141 aa16.1■□□□□ 0.17
CDH11-204ENST00000562712 PELP1Q8IZL8 1130 aaKnown RBP16.1■□□□□ 0.17
CDH11-204ENST00000562712 SYNE4Q8N205 404 aa16.1■□□□□ 0.17
CDH11-204ENST00000562712 C9orf78Q9NZ63 289 aaPredicted RBP16.1■□□□□ 0.17
CDH11-204ENST00000562712 TNNQ9UQP3 1299 aa16.1■□□□□ 0.17
CDH11-204ENST00000562712 KLRG2A4D1S0 409 aaPredicted RBP16.09■□□□□ 0.17
CDH11-204ENST00000562712 GRM8O00222 908 aa16.09■□□□□ 0.17
CDH11-204ENST00000562712 TGFB2P61812 414 aa16.09■□□□□ 0.17
CDH11-204ENST00000562712 USP44Q9H0E7 712 aa16.09■□□□□ 0.17
CDH11-204ENST00000562712 PDZRN3Q9UPQ7 1066 aa16.09■□□□□ 0.17
CDH11-204ENST00000562712 UTYO14607 1347 aa16.09■□□□□ 0.17
CDH11-204ENST00000562712 CDHR2Q9BYE9 1310 aa16.09■□□□□ 0.17
CDH11-204ENST00000562712 IRS4O14654 1257 aaPredicted RBP16.08■□□□□ 0.16
CDH11-204ENST00000562712 RLBP1P12271 317 aa16.08■□□□□ 0.16
CDH11-204ENST00000562712 CASP7P55210 303 aa16.08■□□□□ 0.16
CDH11-204ENST00000562712 RRP1P56182 461 aaKnown RBP16.08■□□□□ 0.16
CDH11-204ENST00000562712 RTL5Q5HYW3 569 aaPredicted RBP16.08■□□□□ 0.16
CDH11-204ENST00000562712 CCDC24Q8N4L8 307 aa16.08■□□□□ 0.16
CDH11-204ENST00000562712 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
CDH11-204ENST00000562712 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
CDH11-204ENST00000562712 RIC1Q4ADV7 1423 aa16.08■□□□□ 0.16
CDH11-204ENST00000562712 DLEC1Q9Y238 1755 aa16.08■□□□□ 0.16
CDH11-204ENST00000562712 ARFGEF1Q9Y6D6 1849 aa16.08■□□□□ 0.16
CDH11-204ENST00000562712 HCLS1P14317 486 aaPredicted RBP16.07■□□□□ 0.16
CDH11-204ENST00000562712 UBE3BQ7Z3V4 1068 aa16.07■□□□□ 0.16
CDH11-204ENST00000562712 PANK1Q8TE04 598 aa16.07■□□□□ 0.16
CDH11-204ENST00000562712 JARID2Q92833 1246 aaPredicted RBP16.07■□□□□ 0.16
CDH11-204ENST00000562712 PDE8AO60658 829 aa16.06■□□□□ 0.16
CDH11-204ENST00000562712 NBPF7P0C2Y1 421 aaPredicted RBP16.06■□□□□ 0.16
CDH11-204ENST00000562712 PLA2G12BQ9BX93 195 aa16.06■□□□□ 0.16
CDH11-204ENST00000562712 SUPT16HQ9Y5B9 1047 aaKnown RBP16.06■□□□□ 0.16
CDH11-204ENST00000562712 ABCC12Q96J65 1359 aa16.05■□□□□ 0.16
CDH11-204ENST00000562712 H0YIN7 160 aa16.05■□□□□ 0.16
CDH11-204ENST00000562712 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
CDH11-204ENST00000562712 CRY2Q49AN0 593 aa16.05■□□□□ 0.16
CDH11-204ENST00000562712 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
CDH11-204ENST00000562712 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
CDH11-204ENST00000562712 ZBTB7BO15156 539 aaPredicted RBP16.04■□□□□ 0.16
CDH11-204ENST00000562712 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
CDH11-204ENST00000562712 GNAI3P08754 354 aa16.04■□□□□ 0.16
CDH11-204ENST00000562712 SRGNP10124 158 aa16.04■□□□□ 0.16
CDH11-204ENST00000562712 SF3B3Q15393 1217 aaKnown RBP16.04■□□□□ 0.16
CDH11-204ENST00000562712 C20orf194Q5TEA3 1177 aa16.04■□□□□ 0.16
CDH11-204ENST00000562712 C2CD5Q86YS7 1000 aa16.04■□□□□ 0.16
CDH11-204ENST00000562712 ITPRIPQ8IWB1 547 aa16.04■□□□□ 0.16
CDH11-204ENST00000562712 ANKRD31Q8N7Z5 1873 aa16.03■□□□□ 0.16
CDH11-204ENST00000562712 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
CDH11-204ENST00000562712 KCNA3P22001 575 aa16.03■□□□□ 0.16
CDH11-204ENST00000562712 MVPQ14764 893 aaKnown RBP16.03■□□□□ 0.16
CDH11-204ENST00000562712 WWC3Q9ULE0 1092 aa16.03■□□□□ 0.16
CDH11-204ENST00000562712 CSF1RP07333 972 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms