RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.12□□□□□ -0.95
CFDP1-202ENST00000562602 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
CFDP1-202ENST00000562602 BAG4O95429 457 aaKnown RBP9.12□□□□□ -0.95
CFDP1-202ENST00000562602 CLCN1P35523 988 aa9.12□□□□□ -0.95
CFDP1-202ENST00000562602 HSPA2P54652 639 aa9.12□□□□□ -0.95
CFDP1-202ENST00000562602 CCDC173Q0VFZ6 552 aa9.12□□□□□ -0.95
CFDP1-202ENST00000562602 FLIIQ13045 1269 aa9.12□□□□□ -0.95
CFDP1-202ENST00000562602 HS1BP3Q53T59 392 aa9.12□□□□□ -0.95
CFDP1-202ENST00000562602 INTS4Q96HW7 963 aaKnown RBP9.12□□□□□ -0.95
CFDP1-202ENST00000562602 EYA1Q99502 592 aa9.12□□□□□ -0.95
CFDP1-202ENST00000562602 MEIS3Q99687 375 aa9.12□□□□□ -0.95
CFDP1-202ENST00000562602 GZF1Q9H116 711 aaPredicted RBP9.12□□□□□ -0.95
CFDP1-202ENST00000562602 ADGRL3Q9HAR2 1447 aa9.12□□□□□ -0.95
CFDP1-202ENST00000562602 MAP3K5Q99683 1374 aa9.12□□□□□ -0.95
CFDP1-202ENST00000562602 MBD3O95983 291 aa9.11□□□□□ -0.95
CFDP1-202ENST00000562602 PDIA4P13667 645 aaKnown RBP9.11□□□□□ -0.95
CFDP1-202ENST00000562602 ZNF445P59923 1031 aa9.11□□□□□ -0.95
CFDP1-202ENST00000562602 DDX49Q9Y6V7 483 aaKnown RBP9.11□□□□□ -0.95
CFDP1-202ENST00000562602 CYP2E1P05181 493 aaPredicted RBP9.1□□□□□ -0.95
CFDP1-202ENST00000562602 MX1P20591 662 aa9.1□□□□□ -0.95
CFDP1-202ENST00000562602 HOXC9P31274 260 aa9.1□□□□□ -0.95
CFDP1-202ENST00000562602 FKBP5Q13451 457 aaPredicted RBP9.1□□□□□ -0.95
CFDP1-202ENST00000562602 SLC4A10Q6U841 1118 aa9.1□□□□□ -0.95
CFDP1-202ENST00000562602 KCNH5Q8NCM2 988 aa9.1□□□□□ -0.95
CFDP1-202ENST00000562602 UBTFL1P0CB47 393 aaPredicted RBP9.09□□□□□ -0.95
CFDP1-202ENST00000562602 AMOTQ4VCS5 1084 aa9.09□□□□□ -0.95
CFDP1-202ENST00000562602 C16orf71Q8IYS4 520 aaPredicted RBP9.09□□□□□ -0.95
CFDP1-202ENST00000562602 SYAP1Q96A49 352 aaPredicted RBP9.09□□□□□ -0.95
CFDP1-202ENST00000562602 ESYT1Q9BSJ8 1104 aa9.09□□□□□ -0.95
CFDP1-202ENST00000562602 USP54Q70EL1 1684 aa9.09□□□□□ -0.95
CFDP1-202ENST00000562602 PEAK1Q9H792 1746 aa9.08□□□□□ -0.96
CFDP1-202ENST00000562602 SALL3Q9BXA9 1300 aa9.08□□□□□ -0.96
CFDP1-202ENST00000562602 CD2BP2O95400 341 aaKnown RBP9.08□□□□□ -0.96
CFDP1-202ENST00000562602 NCLP19338 710 aaKnown RBP9.08□□□□□ -0.96
CFDP1-202ENST00000562602 SSFA2P28290 1259 aa9.08□□□□□ -0.96
CFDP1-202ENST00000562602 CEBPAP49715 358 aaPredicted RBP9.08□□□□□ -0.96
CFDP1-202ENST00000562602 APLP1P51693 650 aa9.08□□□□□ -0.96
CFDP1-202ENST00000562602 PTGDRQ13258 359 aa9.08□□□□□ -0.96
CFDP1-202ENST00000562602 CUL4AQ13619 759 aa9.08□□□□□ -0.96
CFDP1-202ENST00000562602 SSH3Q8TE77 659 aa9.08□□□□□ -0.96
CFDP1-202ENST00000562602 IP6K1Q92551 441 aa9.08□□□□□ -0.96
CFDP1-202ENST00000562602 SLC26A8Q96RN1 970 aa9.08□□□□□ -0.96
CFDP1-202ENST00000562602 PPP1R9BQ96SB3 815 aa9.08□□□□□ -0.96
CFDP1-202ENST00000562602 OVOS2A0A0G2JMS6 1433 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 CACNA1FO60840 1977 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 LRRC37A3O60309 1634 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 ESPNB1AK53 854 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 SMARCA5O60264 1052 aaPredicted RBP9.07□□□□□ -0.96
CFDP1-202ENST00000562602 CHMLP26374 656 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 NASPP49321 788 aaPredicted RBP9.07□□□□□ -0.96
CFDP1-202ENST00000562602 KRT24Q2M2I5 525 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 SWT1Q5T5J6 900 aaKnown RBP9.07□□□□□ -0.96
CFDP1-202ENST00000562602 HDGFL1Q5TGJ6 251 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 ABTB2Q8N961 1025 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 RUFY2Q8WXA3 655 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 KIF1BPQ96EK5 621 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 FER1L4A9Z1Z3 1794 aa9.07□□□□□ -0.96
CFDP1-202ENST00000562602 FMN2Q9NZ56 1722 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 ALDH1L1O75891 902 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 MCM5P33992 734 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 NEK4P51957 841 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 PLEKHO1Q53GL0 409 aaPredicted RBP9.06□□□□□ -0.96
CFDP1-202ENST00000562602 MCTP1Q6DN14 999 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 G2E3Q7L622 706 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 ERC1Q8IUD2 1116 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 CNTROBQ8N137 903 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 ZNF516Q92618 1163 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 GPATCH3Q96I76 525 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 MTRQ99707 1265 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 LMBRD1Q9NUN5 540 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 CEMIPQ8WUJ3 1361 aa9.06□□□□□ -0.96
CFDP1-202ENST00000562602 TTC41PQ6P2S7 1318 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 NCAPD2Q15021 1401 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 F6X3S4 739 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 HIP1O00291 1037 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 SEMA3EO15041 775 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 FOXO3O43524 673 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 LETM1O95202 739 aaPredicted RBP9.05□□□□□ -0.96
CFDP1-202ENST00000562602 CSPP1Q1MSJ5 1256 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 AKAP4Q5JQC9 854 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 KIAA1211Q6ZU35 1233 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 IL17REQ8NFR9 667 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 OTUD7AQ8TE49 926 aaPredicted RBP9.05□□□□□ -0.96
CFDP1-202ENST00000562602 IRX2Q9BZI1 471 aaPredicted RBP9.05□□□□□ -0.96
CFDP1-202ENST00000562602 USP44Q9H0E7 712 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 MIS18AQ9NYP9 233 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 ATP6V1DQ9Y5K8 247 aa9.05□□□□□ -0.96
CFDP1-202ENST00000562602 XRN1Q8IZH2 1706 aaKnown RBP9.05□□□□□ -0.96
CFDP1-202ENST00000562602 WDR33Q9C0J8 1336 aaKnown RBP9.05□□□□□ -0.96
CFDP1-202ENST00000562602 USP42Q9H9J4 1324 aaKnown RBP9.05□□□□□ -0.96
CFDP1-202ENST00000562602 NUTM2FA1L443 756 aa9.04□□□□□ -0.96
CFDP1-202ENST00000562602 APBB1O00213 710 aa9.04□□□□□ -0.96
CFDP1-202ENST00000562602 GLRX3O76003 335 aaKnown RBP9.04□□□□□ -0.96
CFDP1-202ENST00000562602 BRD1O95696 1058 aa9.04□□□□□ -0.96
CFDP1-202ENST00000562602 MTX1Q13505 466 aa9.04□□□□□ -0.96
CFDP1-202ENST00000562602 RILPL2Q969X0 211 aa9.04□□□□□ -0.96
CFDP1-202ENST00000562602 TMX3Q96JJ7 454 aa9.04□□□□□ -0.96
CFDP1-202ENST00000562602 ANO2Q9NQ90 1003 aa9.04□□□□□ -0.96
CFDP1-202ENST00000562602 RRAGDQ9NQL2 400 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms