RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 Q3C1V9 767 aa9.29□□□□□ -0.92
TCF4-213ENST00000562543 MSL1Q68DK7 614 aa9.29□□□□□ -0.92
TCF4-213ENST00000562543 SNIP1Q8TAD8 396 aaKnown RBP9.29□□□□□ -0.92
TCF4-213ENST00000562543 SYMPKQ92797 1274 aaKnown RBP9.29□□□□□ -0.92
TCF4-213ENST00000562543 TFCP2L1Q9NZI6 479 aa9.29□□□□□ -0.92
TCF4-213ENST00000562543 SZT2Q5T011 3432 aa9.29□□□□□ -0.92
TCF4-213ENST00000562543 COL18A1P39060 1754 aa9.28□□□□□ -0.92
TCF4-213ENST00000562543 HABP4Q5JVS0 413 aaKnown RBP9.28□□□□□ -0.92
TCF4-213ENST00000562543 PPLO60437 1756 aa9.27□□□□□ -0.92
TCF4-213ENST00000562543 DXOO77932 396 aaKnown RBP9.27□□□□□ -0.93
TCF4-213ENST00000562543 SMCPP49901 116 aaPredicted RBP9.27□□□□□ -0.93
TCF4-213ENST00000562543 CTC1Q2NKJ3 1217 aa9.27□□□□□ -0.93
TCF4-213ENST00000562543 SLC27A3Q5K4L6 730 aa9.27□□□□□ -0.93
TCF4-213ENST00000562543 C9orf131Q5VYM1 1079 aa9.27□□□□□ -0.93
TCF4-213ENST00000562543 KIF13BQ9NQT8 1826 aa9.26□□□□□ -0.93
TCF4-213ENST00000562543 USP54Q70EL1 1684 aa9.26□□□□□ -0.93
TCF4-213ENST00000562543 ABCC11Q96J66 1382 aa9.26□□□□□ -0.93
TCF4-213ENST00000562543 BRCA1P38398 1863 aaKnown RBP9.26□□□□□ -0.93
TCF4-213ENST00000562543 LY75O60449 1722 aa9.26□□□□□ -0.93
TCF4-213ENST00000562543 USP6P35125 1406 aa9.26□□□□□ -0.93
TCF4-213ENST00000562543 SNRPBP14678 240 aaKnown RBP9.26□□□□□ -0.93
TCF4-213ENST00000562543 SKOR1P84550 965 aa9.26□□□□□ -0.93
TCF4-213ENST00000562543 COL23A1Q86Y22 540 aaPredicted RBP9.26□□□□□ -0.93
TCF4-213ENST00000562543 HPS1Q92902 700 aa9.26□□□□□ -0.93
TCF4-213ENST00000562543 HIRIP3Q9BW71 556 aaPredicted RBP9.26□□□□□ -0.93
TCF4-213ENST00000562543 MCOLN1Q9GZU1 580 aa9.26□□□□□ -0.93
TCF4-213ENST00000562543 CHIC2Q9UKJ5 165 aa9.26□□□□□ -0.93
TCF4-213ENST00000562543 THSD7BQ9C0I4 1608 aa9.25□□□□□ -0.93
TCF4-213ENST00000562543 VEGFBP49765 207 aa9.25□□□□□ -0.93
TCF4-213ENST00000562543 ATP13A2Q9NQ11 1180 aa9.25□□□□□ -0.93
TCF4-213ENST00000562543 ARFGEF1Q9Y6D6 1849 aa9.25□□□□□ -0.93
TCF4-213ENST00000562543 N4BP2Q86UW6 1770 aaPredicted RBP9.24□□□□□ -0.93
TCF4-213ENST00000562543 HOXA2O43364 376 aa9.24□□□□□ -0.93
TCF4-213ENST00000562543 WFS1O76024 890 aa9.24□□□□□ -0.93
TCF4-213ENST00000562543 RC3H1Q5TC82 1133 aaKnown RBP9.24□□□□□ -0.93
TCF4-213ENST00000562543 ABCC6O95255 1503 aa9.24□□□□□ -0.93
TCF4-213ENST00000562543 SBF1O95248 1867 aa9.23□□□□□ -0.93
TCF4-213ENST00000562543 FXR1P51114 621 aaKnown RBP eCLIP9.23□□□□□ -0.93
TCF4-213ENST00000562543 CCDC102AQ96A19 550 aa9.23□□□□□ -0.93
TCF4-213ENST00000562543 ACSBG1Q96GR2 724 aa9.23□□□□□ -0.93
TCF4-213ENST00000562543 CDCA7Q9BWT1 371 aaPredicted RBP9.23□□□□□ -0.93
TCF4-213ENST00000562543 STK26Q9P289 416 aa9.23□□□□□ -0.93
TCF4-213ENST00000562543 SPATA31E1Q6ZUB1 1445 aa9.22□□□□□ -0.93
TCF4-213ENST00000562543 NFX1Q12986 1120 aaKnown RBP9.22□□□□□ -0.93
TCF4-213ENST00000562543 LCE2CQ5TA81 110 aa9.22□□□□□ -0.93
TCF4-213ENST00000562543 ARHGAP27Q6ZUM4 889 aa9.22□□□□□ -0.93
TCF4-213ENST00000562543 LTBP1Q14766 1721 aa9.22□□□□□ -0.93
TCF4-213ENST00000562543 PTCRAQ6ISU1 281 aaPredicted RBP9.21□□□□□ -0.94
TCF4-213ENST00000562543 ITSN1Q15811 1721 aa9.21□□□□□ -0.94
TCF4-213ENST00000562543 MINK1Q8N4C8 1332 aaPredicted RBP9.21□□□□□ -0.94
TCF4-213ENST00000562543 COL6A3P12111 3177 aa9.2□□□□□ -0.94
TCF4-213ENST00000562543 SOX10P56693 466 aa9.2□□□□□ -0.94
TCF4-213ENST00000562543 MPNDQ8N594 471 aa9.2□□□□□ -0.94
TCF4-213ENST00000562543 BCS1LQ9Y276 419 aa9.2□□□□□ -0.94
TCF4-213ENST00000562543 PRR36Q9H6K5 1346 aa9.2□□□□□ -0.94
TCF4-213ENST00000562543 VEGFAP15692 232 aaPredicted RBP9.19□□□□□ -0.94
TCF4-213ENST00000562543 USP46P62068 366 aa9.19□□□□□ -0.94
TCF4-213ENST00000562543 MAP2K1Q02750 393 aaPredicted RBP9.19□□□□□ -0.94
TCF4-213ENST00000562543 SLC17A8Q8NDX2 589 aa9.19□□□□□ -0.94
TCF4-213ENST00000562543 REPIN1Q9BWE0 567 aaKnown RBP9.19□□□□□ -0.94
TCF4-213ENST00000562543 FAM217BQ9NTX9 383 aaPredicted RBP9.19□□□□□ -0.94
TCF4-213ENST00000562543 YTHDC2Q9H6S0 1430 aaKnown RBP9.19□□□□□ -0.94
TCF4-213ENST00000562543 KAT6BQ8WYB5 2073 aa9.19□□□□□ -0.94
TCF4-213ENST00000562543 ALDH1A1P00352 501 aa9.18□□□□□ -0.94
TCF4-213ENST00000562543 KCNQ4P56696 695 aa9.18□□□□□ -0.94
TCF4-213ENST00000562543 VPS8Q8N3P4 1428 aa9.18□□□□□ -0.94
TCF4-213ENST00000562543 SIRT1Q96EB6 747 aa9.18□□□□□ -0.94
TCF4-213ENST00000562543 RNF181Q9P0P0 153 aa9.18□□□□□ -0.94
TCF4-213ENST00000562543 CASP8AP2Q9UKL3 1982 aa9.17□□□□□ -0.94
TCF4-213ENST00000562543 TOGARAM1Q9Y4F4 1720 aa9.17□□□□□ -0.94
TCF4-213ENST00000562543 C5P01031 1676 aa9.17□□□□□ -0.94
TCF4-213ENST00000562543 MEGF6O75095 1541 aa9.17□□□□□ -0.94
TCF4-213ENST00000562543 ZC3H4Q9UPT8 1303 aaKnown RBP9.17□□□□□ -0.94
TCF4-213ENST00000562543 EXOC5O00471 708 aa9.17□□□□□ -0.94
TCF4-213ENST00000562543 JUNDP17535 347 aa9.17□□□□□ -0.94
TCF4-213ENST00000562543 TOM1L2Q6ZVM7 507 aa9.17□□□□□ -0.94
TCF4-213ENST00000562543 GPCPD1Q9NPB8 672 aa9.17□□□□□ -0.94
TCF4-213ENST00000562543 PCDHGC3Q9UN70 934 aa9.17□□□□□ -0.94
TCF4-213ENST00000562543 TIAM2Q8IVF5 1701 aa9.17□□□□□ -0.94
TCF4-213ENST00000562543 RPGRIP1LQ68CZ1 1315 aa9.16□□□□□ -0.94
TCF4-213ENST00000562543 WDR17Q8IZU2 1322 aa9.16□□□□□ -0.94
TCF4-213ENST00000562543 NUTM2GQ5VZR2 741 aa9.16□□□□□ -0.94
TCF4-213ENST00000562543 TRIM47Q96LD4 638 aa9.16□□□□□ -0.94
TCF4-213ENST00000562543 PASKQ96RG2 1323 aa9.15□□□□□ -0.94
TCF4-213ENST00000562543 WNT7BP56706 349 aa9.15□□□□□ -0.94
TCF4-213ENST00000562543 NUTM1Q86Y26 1132 aa9.15□□□□□ -0.94
TCF4-213ENST00000562543 KDM6AO15550 1401 aaPredicted RBP9.14□□□□□ -0.95
TCF4-213ENST00000562543 GLTPD2A6NH11 291 aa9.14□□□□□ -0.95
TCF4-213ENST00000562543 CLCN1P35523 988 aa9.14□□□□□ -0.95
TCF4-213ENST00000562543 DGKZQ13574 1117 aa9.14□□□□□ -0.95
TCF4-213ENST00000562543 NGDNQ8NEJ9 315 aaKnown RBP9.14□□□□□ -0.95
TCF4-213ENST00000562543 NUDT12Q9BQG2 462 aa9.14□□□□□ -0.95
TCF4-213ENST00000562543 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
TCF4-213ENST00000562543 NUP155O75694 1391 aa9.13□□□□□ -0.95
TCF4-213ENST00000562543 TAF1LQ8IZX4 1826 aa9.13□□□□□ -0.95
TCF4-213ENST00000562543 RASSF10A6NK89 507 aa9.13□□□□□ -0.95
TCF4-213ENST00000562543 C6orf229H3BNL8 230 aa9.13□□□□□ -0.95
TCF4-213ENST00000562543 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
TCF4-213ENST00000562543 TERTO14746 1132 aaKnown RBP9.13□□□□□ -0.95
TCF4-213ENST00000562543 BMP1P13497 986 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms