RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 POLMQ9NP87 494 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-211ENST00000562199 USTQ9Y2C2 406 aa6.85□□□□□ -1.31
CAPN3-211ENST00000562199 TMA7Q9Y2S6 64 aaKnown RBP6.85□□□□□ -1.31
CAPN3-211ENST00000562199 GPSM3Q9Y4H4 160 aa6.85□□□□□ -1.31
CAPN3-211ENST00000562199 AQRO60306 1485 aaKnown RBP eCLIP6.85□□□□□ -1.31
CAPN3-211ENST00000562199 PHLDB1Q86UU1 1377 aa6.84□□□□□ -1.31
CAPN3-211ENST00000562199 ERVH48-1M5A8F1 160 aa6.84□□□□□ -1.31
CAPN3-211ENST00000562199 RGL3Q3MIN7 710 aa6.84□□□□□ -1.31
CAPN3-211ENST00000562199 EGFLAMQ63HQ2 1017 aa6.84□□□□□ -1.31
CAPN3-211ENST00000562199 CCDC155Q8N6L0 562 aa6.84□□□□□ -1.31
CAPN3-211ENST00000562199 ZNF784Q8NCA9 323 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-211ENST00000562199 CNTNAP3BQ96NU0 1288 aa6.84□□□□□ -1.31
CAPN3-211ENST00000562199 CNTNAP3Q9BZ76 1288 aa6.84□□□□□ -1.31
CAPN3-211ENST00000562199 ADD1P35611 737 aaKnown RBP6.83□□□□□ -1.32
CAPN3-211ENST00000562199 POU5F1Q01860 360 aaKnown RBP6.83□□□□□ -1.32
CAPN3-211ENST00000562199 NEXNQ0ZGT2 675 aa6.83□□□□□ -1.32
CAPN3-211ENST00000562199 UVSSAQ2YD98 709 aa6.83□□□□□ -1.32
CAPN3-211ENST00000562199 CCDC184Q52MB2 194 aa6.83□□□□□ -1.32
CAPN3-211ENST00000562199 CCAR1Q8IX12 1150 aaKnown RBP6.83□□□□□ -1.32
CAPN3-211ENST00000562199 CCDC146Q8IYE0 955 aa6.83□□□□□ -1.32
CAPN3-211ENST00000562199 TLDC2A0PJX2 215 aa6.82□□□□□ -1.32
CAPN3-211ENST00000562199 SF3B2Q13435 895 aaKnown RBP6.82□□□□□ -1.32
CAPN3-211ENST00000562199 SPACA7Q96KW9 195 aa6.82□□□□□ -1.32
CAPN3-211ENST00000562199 TRIM34Q9BYJ4 488 aa6.82□□□□□ -1.32
CAPN3-211ENST00000562199 GEMIN8Q9NWZ8 242 aaKnown RBP6.82□□□□□ -1.32
CAPN3-211ENST00000562199 ABCF2Q9UG63 623 aa6.82□□□□□ -1.32
CAPN3-211ENST00000562199 RBM19Q9Y4C8 960 aaKnown RBP6.82□□□□□ -1.32
CAPN3-211ENST00000562199 FANCIQ9NVI1 1328 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 SYNRGQ9UMZ2 1314 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 FGD5Q6ZNL6 1462 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 PTPN23Q9H3S7 1636 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 CCDC189A1A4V9 331 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 CDC14CA4D256 554 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 CARNS1A5YM72 827 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 VDRP11473 427 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 KRT76Q01546 638 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 PCGF5Q86SE9 256 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 RPAINQ86UA6 219 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 VWA5B2Q8N398 1253 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 COL25A1Q9BXS0 654 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-211ENST00000562199 QTRT2Q9H974 415 aaKnown RBP6.81□□□□□ -1.32
CAPN3-211ENST00000562199 CYLDQ9NQC7 956 aa6.81□□□□□ -1.32
CAPN3-211ENST00000562199 MAP3K20Q9NYL2 800 aaKnown RBP6.81□□□□□ -1.32
CAPN3-211ENST00000562199 CC2D2AQ9P2K1 1620 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 SLC35F4A4IF30 521 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 LILRA1O75019 489 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 HSP90AA1P07900 732 aaKnown RBP6.8□□□□□ -1.32
CAPN3-211ENST00000562199 TDO2P48775 406 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 EVA1CP58658 441 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 HDLBPQ00341 1268 aaKnown RBP6.8□□□□□ -1.32
CAPN3-211ENST00000562199 XPCQ01831 940 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-211ENST00000562199 LMOD3Q0VAK6 560 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 DDX10Q13206 875 aaKnown RBP6.8□□□□□ -1.32
CAPN3-211ENST00000562199 BIRC2Q13490 618 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 TMEM259Q4ZIN3 620 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 C1orf131Q8NDD1 294 aaKnown RBP6.8□□□□□ -1.32
CAPN3-211ENST00000562199 THOC2Q8NI27 1593 aaKnown RBP6.8□□□□□ -1.32
CAPN3-211ENST00000562199 CASKIN1Q8WXD9 1431 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 INO80BQ9C086 356 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-211ENST00000562199 RSPH9Q9H1X1 276 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-211ENST00000562199 GOPCQ9HD26 462 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 PCDHB9Q9Y5E1 797 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 MRVI1Q9Y6F6 885 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 CUL7Q14999 1698 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 CTTNBP2Q8WZ74 1663 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 KDM5BQ9UGL1 1544 aa6.8□□□□□ -1.32
CAPN3-211ENST00000562199 CCDC18Q5T9S5 1454 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 HFM1A2PYH4 1435 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 UACAQ9BZF9 1416 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 BICDL2A1A5D9 508 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 GIGYF1O75420 1035 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-211ENST00000562199 ADH1AP07327 375 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 PTGIRP43119 386 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 SATB1Q01826 763 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 SLC20A2Q08357 652 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 TBC1D10BQ4KMP7 808 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-211ENST00000562199 LSM14AQ8ND56 463 aaKnown RBP6.79□□□□□ -1.32
CAPN3-211ENST00000562199 RNF217Q8TC41 542 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 RPS6KC1Q96S38 1066 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 MYCBPQ99417 103 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-211ENST00000562199 LNPKQ9C0E8 428 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 RBM28Q9NW13 759 aaKnown RBP6.79□□□□□ -1.32
CAPN3-211ENST00000562199 PUF60Q9UHX1 559 aaKnown RBP6.79□□□□□ -1.32
CAPN3-211ENST00000562199 CTDP1Q9Y5B0 961 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-211ENST00000562199 CARMIL1Q5VZK9 1371 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 HECW1Q76N89 1606 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 NCOA2Q15596 1464 aa6.79□□□□□ -1.32
CAPN3-211ENST00000562199 KIF21AQ7Z4S6 1674 aa6.78□□□□□ -1.32
CAPN3-211ENST00000562199 FGD6Q6ZV73 1430 aa6.78□□□□□ -1.32
CAPN3-211ENST00000562199 ESPNB1AK53 854 aa6.78□□□□□ -1.32
CAPN3-211ENST00000562199 CBFA2T2O43439 604 aa6.78□□□□□ -1.32
CAPN3-211ENST00000562199 ITGA6P23229 1130 aa6.78□□□□□ -1.32
CAPN3-211ENST00000562199 ITGAEP38570 1179 aa6.78□□□□□ -1.32
CAPN3-211ENST00000562199 PEX19P40855 299 aa6.78□□□□□ -1.32
CAPN3-211ENST00000562199 RNFT1Q5M7Z0 435 aa6.78□□□□□ -1.32
CAPN3-211ENST00000562199 SDE2Q6IQ49 451 aa6.78□□□□□ -1.32
CAPN3-211ENST00000562199 KDF1Q8NAX2 398 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-211ENST00000562199 PAGR1Q9BTK6 254 aa6.78□□□□□ -1.32
CAPN3-211ENST00000562199 GCC2Q8IWJ2 1684 aa6.77□□□□□ -1.32
CAPN3-211ENST00000562199 ZBBXA8MT70 800 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms